KEGG   Chelonia mydas (green sea turtle): 102937445
Entry
102937445         CDS       T02989                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102937445 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmy03041]
    102937445 (SF3A1)
Spliceosome [BR:cmy03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    102937445 (SF3A1)
 Complex B
    102937445 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    102937445 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2
Other DBs
NCBI-GeneID: 102937445
NCBI-ProteinID: XP_037734241
LinkDB
Position
15:491437..511265
AA seq 788 aa
MPAGPVQALPPAQPAPQEGKQPEDEPKEEAAPAKPVVGIIYPPPEVRNIVDKTASFVARN
GPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQQSA
QQQLPQKVQAQVIQETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQ
LMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLIKLKKEAENPREVLDQVC
YRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTPEEL
GARILIQERYEKFGESEEVEMEVESDEEDEKQEKTEETPSQLDQDTQVQDMDEGSDDEDE
SQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPASK
MQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEETAI
GKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDSKEK
IGPSKPNEMPQPPPPSAASNPPSNAPPIASVPRPPSMPPPVRTTVVSAVPVMPRPPMTSV
VRIPPGSVIAAPMPPIIHAPRINVVPMPPSGPPMMAPRPPPMIVPTAFVPAPPVAPVPAP
APMPPHPPPPMEDEPVSKKPKSEDSLMPEEEFLRRNKGPVTVKVQVPNMQDKTEWKLNGQ
VLVFTLPLSDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMISGSVIHLAL
KERGGRKK
NT seq 2367 nt   +upstreamnt  +downstreamnt
atgccggccggtccggtgcaggcgctgccgcccgcgcagccagcgccgcaagaaggcaaa
cagccagaagatgagccaaaagaggaagcggcaccagccaaacccgttgtgggaattatt
taccctcctccagaagtcaggaatattgtggacaagactgccagctttgtagccagaaat
ggtccagagtttgaagctcgaatccgtcagaatgaaataaacaaccccaagttcaatttc
ttgaatcccaacgatccctaccatgcatactaccggcacaaagtcagtgagttcaaagag
ggcaaggcacaggagccttcagctgccatccccaaggtcatgcaacagcagcaaagtgct
cagcaacagcttccccagaaggtacaggctcaggtgatccaggagacagtcgttccaaaa
gagccacctccagagtttgagttcatcgcagatcctccctcaatttcagcctttgacttg
gatgtggtgaagcttactgcacagttcgtagctcggaatggccggcagttcctgactcag
ctgatgcagaaagagcagaggaattaccagtttgacttcctgcgcccacagcatagcctt
tttaactacttcaccaaactggttgagcagtacacgaagatcttgatcccgcctaaaggc
ttacttatcaaactcaagaaggaggctgaaaaccctagagaagtcctggatcaggtgtgc
tacagagtggagtgggccaagttccaggaacgagagagaaagaaggaagaggaggagaag
gagaaggaacgtgttgcttatgcccagattgattggcatgactttgttgttgtggaaaca
gtggacttccagcccaatgagcaagggaactttcctcctcccaccactcctgaggagctg
ggggctcgcatactgatccaggagcgctatgagaagtttggtgaaagtgaggaagtggag
atggaggtggagtcagatgaagaagatgaaaagcaagagaagaccgaggagaccccatct
caactagaccaagacacgcaagtgcaggatatggatgagggctcagatgacgaagatgag
agtcagaaagttccacctcctcctgagaccccgatgccaccacctcttcctccaactcca
gatcaggtcattgtgcggaaagactacgatcccaaagcctccaagccattaccaccagca
ccagccccagacgaatatcttgtgtctcccatcactggagagaagattcctgccagtaaa
atgcaagaacacatgcgaatcggccttctggatccccgctggctggagcagcgggatcgg
tctatccgtgagaaacagagtgatgacgaggtctatgccccaggtttggatattgagagc
agcttgaaacagctggctgagcgccgtactgatatctttggtgtggaagagactgctatc
ggtaaaaagattggagaagaggagatccagaaaccagaggaaaaggtgacctgggatggc
cactctggcagtatggcccgcacacagcaggctgctcaggccaatatcaccctgcaagag
cagatcgaggctatccataaggccaaggggctggtgccagaagatgacagcaaagagaag
attggtcccagcaagcccaatgagatgccccagcctccacctccctcggcagcatcgaat
cccccatctaatgctcccccaatcgcatctgtgccacgccctccatcgatgccgcctcct
gttcgcaccactgttgtttctgcagttcctgtcatgcctcgtccccctatgacttctgtg
gtccgtatacccccaggctctgtcatcgcagcccccatgccaccaataatacatgcccca
cgcatcaatgttgtcccgatgccgccatctggtccccccatgatggcccctcgcccgcct
cccatgatagtaccaacagcatttgtcccagcccctcctgtggctccagtccctgcccca
gcaccaatgcctcctcaccccccaccacccatggaggatgaacctgtgtctaagaaaccg
aaaagtgaggacagcctgatgccagaggaggagttcctgcgcaggaacaagggtccagtc
acagttaaagttcaggttcccaacatgcaggacaagactgaatggaaactgaatggccag
gtgctggtgttcactcttccgctctcggatcaggtctctgttataaaggttaagatccac
gaggccacagggatgccagcagggaaacagaagctgcagtatgagggcattttcatcaag
gactccaactctttggcttactacaacatgataagtggctctgtgattcacctggcactc
aaagaaagaggaggcagaaagaagtag

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