KEGG   Chelonia mydas (green sea turtle): 102937571
Entry
102937571         CDS       T02989                                 
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
  KO
K24357  collagen type XX alpha
Organism
cmy  Chelonia mydas (green sea turtle)
SSDB
Motif
Pfam: fn3 VWA Collagen Ig_DSCAM-DSCAML_C Pur_ac_phosph_N VWA_2 CBM_4_9
Other DBs
NCBI-GeneID: 102937571
NCBI-ProteinID: XP_043383410
LinkDB
Position
13:complement(6225884..6321179)
AA seq 1476 aa
MLCHRSFLFACITLASHVTGHVHGQGPNRLKLTVLSEDRLQMKWKETEGTISGYKVQVKP
MAGDLEQEVMLKTKTPKATVGGLSPTKEYTLQIYVLNGSQEALFAKRKFVIQELKNISQA
RNTRRNTATSPRKSITPLRNTATEHIPVAKTTSPAPSEASTQTAKDRPEKRRQKAAVSKD
SSETLGRKPNIKFSVTETPTTLKTTLRSPTKSERGDLGQEKHTKGTLKRGPQFQCDTSAT
TDIVLLVDGSWSIGRRNFKLVREFLSTLVSPFNIARDKIRIGLSQYSSDPRTEWNLNTYV
TRDEVLEAVRNLRYKGGNTFTGLALSYVLEQNLKPEAGARSDAVKLVILLTDGKSQDDAN
LSAQTLKNMGIEIFAIGVKNADEAELRQVASEPLELTVYNVLDFPLLSSLVSRLSRVLCT
RIKEKHKSENTDSPVKAVSANTGPHLSPTNLIISEVTSRSMHLSWTPPLRPPKKYRIVYY
PSRGGIPKEVVLDGSTSSTQLVNLTSHTEYLVSVFPIYENAVGDGLRGITSTSLSPPLSL
RALEVSHNSLTLSWQPSSGATQYLVLCSAAPNGAEDDTKEVKVEQPEVLLDGLSPSTEYS
VAVYAMYGEEASDPASIQETTLALSPPRHLSFSEISHGAVKVSWDAASRAVRAHRVTYVS
SRGSNAGEVEVPSSASSTVLRPLSSLTQYFISVSSIYSEGESFPLTGNVTTLKVPPPGDL
KVTELSGNNVRLQWEAAAASDVLVYQIKWNALGEESSQELSVAGNLAAASLPGLKKNTEY
QISIWAYYKDGARSDTVSILHRTTSQSPPTDLVIDSETPNSLQVHWRPPGSHIQYYRVTY
TPESDDSAQQTVMVSGKSSGVTLQSLLPNTAYKVMVSAVHDAGESDAVSTTGQTGRQITS
VLAKLPSTQGSVPFKTEACPTISSTEGSLQGFDMMEAFGLVEKEYASIKGVAMEPYVFSG
TRTYTLFRDIQLTQRTSEVLLSGIPSVHTISILLRLLPETPKVPFAVWQLTDEDFQPLLG
VILDSSKKSLTYFNHDYKADLQEVTFDQQEVKKIFYGSFHKVHIAVSHFRIKLYLDCKKI
AEKPINAMGSISSAGFIMLGKLTGTRGPRSGSAAFQLQSLQIVCSGSWAEEDRCCDLPAL
RNEETCPALTPSCTCTSGIPGPPGPPGSPGSPGRRGPQGEQGEPGPKGEPGPPGQVGPEG
PSGQQGSLGSQGITVQGPVGPPGIKGDKGDTGIPGIQGIPGAQGAPGRDGIQGAKGVRGL
EGTAGPPGPPGPRGFQGITGARGSSGERGPPGDVGPTGLPGPKGERGEKGEPQSLATIYQ
LVSQACEQMIQTHVLKFDSFIHEHTRKPVPVWDDTLKPGGPGPPGLPGIAGTRGERGEDG
IPGQPGKDGYPGERGGPGPKGEKGMAGAREEGVQGPRGRAGPPGEQAIGDSGPKGSPGST
GPPGFPGARGNPGAPGYPGGCANSGCYRASIRDFIP
NT seq 4431 nt   +upstreamnt  +downstreamnt
atgctgtgtcaccgttccttcttgtttgcctgcataaccttggcgagtcatgtcacagga
cacgtgcatggtcaagggccaaaccggttgaaactaaccgtcctctcggaagaccggcta
cagatgaaatggaaagaaacagaagggaccatcagcgggtacaaggttcaagtgaagccc
atggcaggtgacctggaacaggaagtcatgctgaaaaccaaaacgcctaaggcaacagtg
ggagggctaagccccacgaaggaatacaccctgcaaatctacgtgctcaatggctcccaa
gaagccctgtttgctaaaaggaaatttgtgattcaggagctgaaaaacatctcgcaggct
agaaatacccgaaggaacacagcgacctccccaagaaagagcatcacccctttgagaaat
acagcaaccgagcacattccagtggctaagacaacgtcaccggctccaagtgaagcctca
acacagacagcaaaagacagacctgaaaagagaagacagaaggcagcagtatccaaggac
tcaagtgaaaccctcggaaggaaaccaaacatcaagttcagtgtgacagaaacaccaaca
acgttgaaaacaactctgcgcagtcccacaaaatctgagcgaggagatctaggccaagaa
aaacacacaaagggaactttaaagagaggtcctcagtttcaatgtgacacatctgccaca
actgatattgtcctgctggtggatgggtcttggagtattggacgcagaaacttcaagctt
gtcagggagttcctgagcaccttggtttcacctttcaatattgcccgggataagataagg
ataggtttgtcccagtacagcagtgatccacggacagagtggaacctgaacacctacgtc
acaagggacgaggtgttagaggcggtgaggaacctgcgatataaaggcggcaacactttc
acaggccttgctttgtcctatgtcctagaacaaaatctgaaacctgaagctggtgccagg
tcggatgcagtcaagctggtgatcctcttgactgatggaaaatcacaggatgatgccaac
ctgtctgcccagaccttgaaaaatatgggcatagagatatttgccattggggtgaaaaat
gcagatgaggcagagctgagacaggtggcatcagagcccctggagctcactgtttataac
gtgctggatttccccctgctcagctctctggtcagcaggctcagccgggtcttgtgcacc
aggatcaaagagaagcacaagagtgaaaacacagacagtcctgtgaaagctgtctcagcc
aacactggtccccatctgagtcccaccaaccttataatatcagaggtgacctccagaagc
atgcacctttcctggactcctccgctgagaccaccaaagaaatataggattgtatattac
ccatccaggggaggaatccccaaagaggtagttttagacggatctacctcctccactcag
cttgtcaatttgacctcgcacacagaatacctggtttcggtgtttcctatttatgaaaat
gccgttggagatgggctgaggggcatcacctcgacatctttgtcaccacccctttccctg
cgcgcattggaagtgagccacaacagtctaacactgagctggcagccgtcaagtggagct
actcagtacctggtgctctgttcagcggcccccaatggagcggaggatgataccaaagag
gtgaaagtggaacagcctgaggttctgctggacgggctgtctcccagcacggagtactcc
gtagcagtgtatgcaatgtacggggaagaagcaagtgatccagccagcatccaggaaacc
accttggcactgagccctcctagacacctaagtttctctgagatcagccatggggctgtc
aaggtcagctgggacgcggcttcgcgtgctgtgagagctcaccgtgtgacctacgtctca
agcagagggagcaatgccggggaggtcgaagttcccagcagtgcatcatccactgtgctg
agacctctgtcctctctcacccagtacttcattagtgtcagctccatttatagtgaaggc
gaatcctttccgcttacaggcaatgttaccacattaaaggttccaccaccaggtgacctg
aaggtgactgaactctcaggaaacaatgtccggttgcagtgggaagcagccgctgcctct
gatgtcctggtttatcagattaaatggaatgcacttggagaagagagctcccaggagctg
tctgttgctgggaacctggctgctgccagtttaccaggattgaaaaagaacacagaatac
cagatatcgatctgggcatattacaaggatggagctcgaagcgacactgtctctattctg
cacagaactacttcccagagcccacccaccgatctcgttatagactcggagacccccaat
agcctgcaagtccactggagaccccctggcagccacatacaatactaccgagtaacctac
actcctgaatctgacgacagtgctcagcaaacagtaatggtttccggtaaaagcagcgga
gtgaccctgcagtcgctgcttcccaacacagcatacaaggtgatggtttctgctgtccat
gacgcaggagagagtgatgctgtgtcgacaactggccaaactggtaggcaaatcacttct
gtcttggctaaactgccctcaacacaaggctccgttcccttcaaaacagaggcttgcccc
actatcagttccactgaaggctctctgcaaggatttgacatgatggaggcttttggactg
gtggaaaaagaatatgcctccattaaaggagtggccatggaaccatatgtgttcagcggg
acccgtacttacactctcttcagagatattcagctaacccagagaacaagtgaagtgctt
ctctctgggattccgtctgtgcacaccatcagcatcctactccggctccttccggagact
cccaaagtgccctttgccgtgtggcagctaacagatgaggacttccaaccactcctcggg
gttatacttgactccagtaagaaatccttgacctatttcaatcatgactacaaggctgat
ttacaggaagtcacctttgaccaacaggaagtgaagaagatattctatgggagctttcat
aaggtgcacatagctgtgagccatttcaggatcaaactctacttggactgtaagaaaata
gcggagaaaccgatcaatgctatgggaagcatctcctctgccggcttcatcatgctagga
aaactgacaggaaccagaggacccaggagtgggtcagcagcattccagctgcagtcttta
cagatagtttgcagtggctcatgggcagaggaagatagatgttgtgatctcccggcactg
agaaatgaagagacctgccctgccttaactccttcctgcacctgcacttcaggtatccca
ggcccgccaggtcctccagggtcccctggcagtcctgggagaagaggaccacaaggggaa
caaggggaaccagggccgaagggtgagccaggtcctcctggacaagtcggaccagagggt
cctagtggacaacaagggtcactaggctcccaaggaatcaccgtgcagggcccagtggga
ccaccaggaattaaaggggataaaggagacactggaatcccaggcattcagggtattcct
ggtgcccagggagccccaggcagagacggcattcagggtgcaaagggggtgagaggactg
gaaggcacagcagggcctccggggccaccaggacccaggggtttccaaggaataacaggt
gcccgaggcagtagcggagagcgaggacctccaggtgatgttggacccacaggtctgcct
ggtccaaagggggaaaggggagagaaaggtgaaccacaatccctggccaccatttaccag
ctggttagtcaggcttgtgagcagatgattcagactcatgtgttgaaatttgactcattc
atccacgagcatacaaggaagccagttcctgtgtgggatgacacattgaagccaggagga
cctggaccaccaggtcttccgggtatcgctggtaccagaggagaaagaggagaagacggt
atcccaggacagccaggcaaagatgggtatcctggagaaagaggaggaccaggacccaag
ggtgagaaagggatggctggagccagggaggaaggagttcagggaccaagaggacgagca
ggccctccaggagaacaagccataggggactcaggtccgaagggttcccccgggagcacc
ggtcctccaggttttcctggtgccagaggcaatcctggggcacctggctacccaggtggt
tgtgctaattcaggatgctacagggcaagcataagagatttcatcccctga

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