Chelonia mydas (green sea turtle): 102937721
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Entry
102937721 CDS
T02989
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03013
Nucleocytoplasmic transport
cmy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102937721 (UPF3B)
03015 mRNA surveillance pathway
102937721 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102937721 (UPF3B)
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
102937721 (UPF3B)
mRNA cycle factors
P-body specific factors
102937721 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
102937721
NCBI-ProteinID:
XP_037764266
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All DBs
Position
9:88175312..88185638
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AA seq
465 aa
AA seq
DB search
MKEDKENTRPKEKRAPGAPLDLRGGGEPERPKDKKETLSKVVIRRLPPSLTKEQLEEHLQ
PLPEHDYFEFFANDSSLYPHMFSRAYINFKNQEDIVLFRDRFDGYVFVDHKGQEYAAIVE
FAPFQKSAKKKNKKKDAKTGTIDDDPEYKKFLESYSADDEKLTSTPETLLEEIEARNKEL
IAKKTTPLLNFLKNKQRLREEKREERRRRELERKRQREEERRKWKEEERRKRKEAEKLKK
VDKCPEKERDKSKDEPKIKLLKKPEKDERDLEKKEKFKKLEKENVREEKAAGTLSSVSAK
RSDGETKEEKGKKSEDEYGKDYRDRERDFEREREYERLQREKQRRQDEERRRQKERFEKE
KVFRRKEEEVKKEINSLREKGRKSDLPDFTGNTEKSEKITKDDKKEDAAKRDRIRNKDRP
AMQLYQPGVRSRSRLCPYEDIATKSADQGADKKQESETSNTKEEE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggataaggagaacactaggcctaaggagaagcgggcgcccggggcccccctg
gatctccgggggggcggggagcccgagcggcccaaggacaagaaggagacgctcagcaag
gtggtaattcgacgcttgcctcccagtttgaccaaggaacagcttgaagaacatcttcag
cctttgcctgaacatgactattttgaattctttgctaacgattccagtttgtatcctcac
atgttttccagagcatacatcaactttaaaaaccaagaagacatagtactgttcagggat
cgttttgatggttatgtttttgttgatcacaaaggtcaggagtatgctgccatagtcgaa
tttgcacctttccaaaaatctgcaaaaaagaagaataagaaaaaggatgccaaaactggg
actattgatgatgacccagagtataagaagtttttggaaagttacagtgcagatgatgaa
aagttaacatcaactcctgaaacactactagaggaaatagaggcaagaaacaaagagtta
atagctaaaaagacaactccccttctgaacttcttgaaaaacaaacagagactgagagaa
gaaaaaagagaggagaggagaagaagggaactggaaagaaaaagacaaagagaagaagaa
aggaggaaatggaaagaagaagaaagaaggaagagaaaagaagcagaaaaactgaagaaa
gttgacaaatgcccagagaaagaaagggataaatcaaaggatgaaccaaagattaaacta
cttaagaaaccagagaaagatgaaagagacttggagaaaaaggaaaagttcaagaaactg
gaaaaagaaaatgtgagggaggaaaaggctgctggcacgctaagcagtgtgtcagccaaa
cgatccgatggagagactaaagaagagaagggaaaaaaatctgaagatgaatatggaaaa
gattacagggaccgggagagagactttgaaagagagagagaatatgagagactgcagcgg
gagaaacagagacgccaagacgaagagcgtcgtaggcagaaggaacgctttgagaaagaa
aaagtttttagaagaaaagaggaagaggtgaaaaaggagataaactcactcagagagaaa
ggaaggaaaagtgatcttccagattttacaggcaacacagaaaaatctgagaaaataacc
aaagatgacaaaaaagaggatgcagctaagagagatcgcatcagaaacaaggatcgtcca
gcaatgcagctataccagccaggagttcgaagtcgaagtagactgtgtccttatgaagac
attgctacaaagtctgcagaccaaggagcagataaaaaacaggaaagtgagaccagtaat
acaaaagaagaggagtga
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