Chelonia mydas (green sea turtle): 102937732
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Entry
102937732 CDS
T02989
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102937732 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmy03000
]
102937732 (ARID1B)
03021 Transcription machinery [BR:
cmy03021
]
102937732 (ARID1B)
03036 Chromosome and associated proteins [BR:
cmy03036
]
102937732 (ARID1B)
Transcription factors [BR:
cmy03000
]
Eukaryotic type
Helix-turn-helix
ARID
102937732 (ARID1B)
Transcription machinery [BR:
cmy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102937732 (ARID1B)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102937732 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
102937732
NCBI-ProteinID:
XP_037750964
LinkDB
All DBs
Position
3:114911024..115309286
Genome browser
AA seq
2453 aa
AA seq
DB search
MIMAAQVAAAPAGAKNNKGKTPSLPGNLSQDLSSGGAAAAAAAGGPGPGSMLGVGDGTNS
SSLNNVDHHLLHHHNELNMANNATSAAATGNNNNNANTSSSCSSSSESALKEGGSSSGLP
SSSSSSSSSSSSNPGSAMETGLLPNHKLKNVGGDHPAAPPHHHHAHHPHHHAHHHHAHHQ
HHHHHALQQQLNQFQQQQPPPQHHPMQNNNSLGGGGGNNNNGGGGAAQPSADMEQQQHGG
KDSVLGNQAEPPPPPQQQMLNKGGEEEELPSKMGEQIGGRYDHPSLGPLGGQQQQQPQSA
GSGSGNSSLGGGSGGGGGGPSAVGVSEFNSYYGNPAPASSATASRAGPCFDQHGGQQSPG
MGLMHPTAAPNSMDPLQNSHEGYPNSQYNHYPGYGRAGGAAAGGAGAAAAAVAAAAAAGA
GGGGYGGSSSGYGVLSSPRQQGSSMMMGPGGGASLGKAAATSGAGGFQRFSGQNQHPSGA
TPTLNQLLTSPSPMMRSYGSSYPDYSNPTAPPQQQPQPQAAAAAPGSQQAAAGMGMGMGK
DMGSQYGSANPAWAAAQQRAHPAMSPGSTGQTISRTQGSPMDPMVMKRPQLYGMGNNPHS
QTQQSSPYPGQSYGPPGAQRYPMGMQGRTSGALGGIQYPQQQMPPQYGQQGVSGYCQQGQ
QPYYNQQPQPQHLPPQAQYLSQAHQRYQTQQDMSQEGYGNRSQPPIASGKPNHEDLNLIQ
QERPSSLPVEVLASEDAAFGLKDLSGSIDDLPTGTEATLSSAVSASGSTSSQGEQSNPAQ
SPFSPHASPHLSGIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSS
HPALSQSPMPQDRGFMAGIQRNPQISQYGPQQTGPSMSPHPSPGGQMHPGIGSFQQSNSS
GTYGPQMSQYGPQGNYSRPPTYSGVTNTSYSGPGPGMGINANSQMHGQGPSQPCGTMPLG
RMPSAGMQSRPFPGNMGSMTPNSPGMSLQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSA
QSRPPYIRSPAYPSQSGAGGRPMFSSQHPNYGSAQAPMMHQPDQYGQGSFPGMNQSGIMG
SSSPYTQPMNNSSGLMNPQAPPYSMAPNMVNSSTGNAPMGLADMMTPGESKLPLPLKVDG
KEEGPPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSISSPGWP
KTPSSPKSSSSTTTGEKITKVYELGSEPERKMWVDRYLTFMEERGTPVASLPAVGKKPLD
LFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIERG
EEPPPEVFSTGDTKKQPKIQPPSPANSGSLQGPQTPQSTGSNSMTEVPGDLKPPTPASTP
HGQMTPMQGGRNSAVSVHDPFSDVSDSAFPKRNSMTPNAPYQQGMNMPDMMGRMPYEPNK
DPFGGIRKVPGSSEPFMAPGQMPNSGIQDIYNQTPSGAMSTMSMSQRQQFSYGSGYDRRS
DHGLGPEGSMGPPGQSNMVPSNSDPSMYSPNRYPGQQRHEPYGQQYPGQGPPSGQPPYGG
HQPGMYPQQQNYKRHMDGMYGPPAKRHEGDMYNMQYGNQQQEMYNQYSNTYSGPDRRPIQ
GQYPYPYNRERMQGPGQIQQHGIPPQMIGGPMQSSSTSEGPQQNMWPTRNDMPYPYQNRQ
GPGGPAQAPPYPGMNRTDDMMVPDQRINHESQWPSHVNQRQTSYMSSSASMQPITRPPQS
SYQTPPSMPNHISRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVIPTVPVSQVTGPPPQ
PPPIRREITFPPGSVEASQPVLKPRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTI
NILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPGHKALDHNAVKK
DDSQSLAVDTGKEEENDECIDYFEEEEEEEWEEEDEIEKTEGEEKSTVFATPSAIADPSE
RPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFES
KMEIPPRRRAPPALNSPSKKKDLEGKGEPEEQHEKSITATIDDVLSARPGALPEDSNPGS
QTESSKFPFGIHQAKSHRNIKLLEDEPRSRDETPLCTITHWQDSLAKRCICVSNIVRSLS
FVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEEEDKGVACSKDEWWWDC
LEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVL
SPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKLYATLVRYVGDRKNPVCREMSMALLS
NLAQGDVLAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMC
RAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSMVASVICDVLFQIGQL
NT seq
7362 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggccgcgcaagtagcagcggctccagcgggtgcgaagaacaacaagggcaaa
accccgagtttgccgggcaacttgagccaggatctcagctcggggggagcagcagccgcc
gcagccgctgggggacctggaccgggctccatgctgggggtcggagatgggaccaacagc
agcagcctgaataatgtagatcaccatctcctgcaccaccataatgaactgaacatggcc
aataatgcaacttctgctgctgccaccggtaataataacaacaacgctaacaccagcagt
agctgcagctcctcttcggagtccgctctgaaagaaggtggaagctcatcggggttaccg
tcttcttcttcttcttcctcctcctcctcctcctccaacccgggctcggccatggagacg
gggctgctccccaaccacaaactgaaaaacgttggaggcgatcaccctgctgcacctccc
caccaccaccatgcccaccaccctcatcaccatgcccaccaccaccatgcccaccaccag
caccaccaccaccatgcactacagcagcaactaaatcaattccagcagcagcagccgccg
cctcagcaccatccgatgcagaataacaacagcctcggcggcggcggcggcaacaacaac
aacggcggtggcggcgctgctcagcccagtgcagacatggagcagcagcaacatggagga
aaagacagtgttttgggaaatcaggccgagcccccgccgccgccgcagcagcaaatgctg
aataaagggggcgaggaggaagagctgcccagcaaaatgggagagcagatcggcggccgc
tacgatcaccccagtttgggacctttgggcgggcagcagcagcagcagccccaaagcgct
gggagcggcagcggcaatagtagcctcggcggcgggagcgggggaggcggcggcggcccc
tccgctgtgggtgtctcggagtttaacagctattacggcaaccctgcccctgccagcagc
gctacagcgagccgagccgggccttgctttgatcaacatggcggacaacaaagccccggg
atggggctgatgcaccccacggcggcccccaacagcatggaccccctgcagaactcccac
gagggttaccccaacagccagtacaaccactaccctggctacggccgggccggcggcgcc
gcagcgggaggagcaggagcggcggcggcggcggtagcagccgcggctgcagcaggagct
ggaggaggcggctatgggggctcgtcctctggctacggggtgctgagctccccccggcag
cagggcagcagcatgatgatgggcccaggtggaggggccagccttggcaaggctgctgcg
acttctggggctggaggctttcagagattttccgggcagaaccagcacccgtccggggcc
acccctaccttgaaccagctgctcacttcccccagccccatgatgaggagctatggcagc
agctaccctgattacagcaaccccactgccccaccacagcagcagccacaaccccaggca
gcggcggcagcgccaggaagccagcaggcagcagcgggcatgggcatgggcatgggcaaa
gacatgggctcccagtatggatctgcaaacccagcctgggcagcagcacaacaaagagct
catccggctatgagccctggaagcactggtcagaccatcagcagaacccagggcagccca
atggatccaatggtaatgaagagacctcagttgtatggaatgggcaataaccctcattcc
cagacacagcaaagcagtccatacccggggcagtcatatggccctccaggagctcaacga
tatccaatgggaatgcagggacggacctcgggagccctgggaggaatacagtatccacag
caacagatgccgcctcagtatggtcagcaaggggtaagtggctactgccaacagggccaa
cagccatattacaaccagcaaccgcaacctcagcatctgccaccccaggcacagtatctg
tcgcaggcccaccagaggtaccagacacagcaggacatgtctcaggaaggctatggaaac
agatcccaaccccctatagcctcaggaaagcctaaccatgaagacttaaatctaatacaa
caagaaagaccatcaagcttaccagttgaagtcttggcctcggaggatgctgcatttgga
ctgaaggatttatccggctccattgatgacctgcccactggaactgaagcaacactaagt
tcagcagttagtgcatcaggttctacaagcagccagggagagcagagtaaccctgcacag
tcgcctttctcccctcatgcctccccacatctctctggcatcccaggcggtccatcacct
tcccctgtaggctctcctgttggaagcaaccaatcaagatctggtccaatttctcctgca
agtattccaggtagtcaaatgccacctcagcctcctggtagccaatcagaatccagctcc
catcctgccttgagccagtcaccaatgccacaagatcgaggttttatggcaggcatacaa
aggaacccacaaatatcccaatatggacctcaacaaactgggccttccatgtcaccacat
ccttcacctggaggccaaatgcatcctgggattggtagtttccagcagagtaattcaagt
ggtacttacgggcctcagatgagccagtatggaccacaaggaaactactccagaccgcca
acatacagtggggtgactaacacaagttacagtggcccaggacccggcatgggtataaat
gccaatagtcagatgcatggacaagggccaagccagccatgtggtaccatgcccctggga
cggatgccatcagctgggatgcaaagcagaccatttcctggaaacatgggcagtatgacc
cccaattctcctggcatgtctctgcagggaggccctgggatgggcccacccatgccaact
gtgaaccgtaaggcacaggaggcagctgctgcagtgatgcaggctgctgcaaactccgct
cagagcaggccaccatacattaggtcgcctgcttatcccagccagtctggggctggcgga
cgccccatgttttcttcacagcaccccaactatggcagcgctcaggctcccatgatgcac
cagcctgaccagtacgggcaaggcagttttcctggcatgaatcagagtggtattatggga
tccagttctccctacacgcagccgatgaacaacagctctggcctgatgaacccacaagct
cctccttacagcatggcacctaacatggtgaacagttcaacaggtaatgcacctatgggt
cttgcagatatgatgacacctggtgagtccaaactgccccttcctctcaaagtagatggc
aaagaagaaggacccccacagcccgagagcaagtcaaaggatagctacagctctcagggt
atttctcagcccccaaccccaggcaacctgccagtcccttccccaatgtccccaagctct
gctagcatctcctcatttcatggagatgaaagtgatagcattagcagcccaggctggcca
aagactccatcaagccctaaatcaagttcctccaccacaactggagaaaagatcacaaaa
gtctatgagctgggaagtgagccagagcgcaagatgtgggtggatcgatacctcaccttc
atggaagaaaggggcacgcctgtggccagtctgccggctgtaggcaagaagccactggac
ctgttcaggctttatgtctgtgtcaaagagattggaggtttagcacaggttaataaaaac
aagaagtggcgcgagttggcaaccaacctgaatgttggcacttcaagcagcgcagccagc
tccctgaaaaaacagtatattcagtacctgtttgccttcgagtgtaagattgaacgaggg
gaggagccccctccagaggtcttcagcactggagatactaagaaacaacctaagattcag
ccgccatctcctgctaattctggttccctacaaggtccacagactccccagtctactggt
agtaattccatgacagaagtgccaggcgacctgaagcctccaacaccagcatcaacacct
catggacagatgacacccatgcagggcggcagaaacagtgctgttagtgtgcacgatccc
ttttctgatgtaagtgattccgcattcccgaagcgaaactccatgacgccaaatgcacca
taccagcaggggatgaacatgccagatatgatgggaaggatgccctatgaaccgaataag
gacccttttggtgggataagaaaagtgcctggaagcagtgagcccttcatggcccctgga
caaatgcccaatagtggaatacaggatatctataaccagactccatctggagcaatgtcc
accatgagcatgagccagcggcagcaattctcttatggaagtggctatgacaggaggtcg
gatcatgggctgggtcctgaaggcagtatgggaccacctggtcagagcaacatggtgcct
tcaaacagtgacccaagcatgtactctcctaatcgttaccctggccagcagaggcatgaa
ccatatgggcagcagtatccagggcaaggacctccttcaggacaaccaccgtatggagga
catcaacctggaatgtatccacagcagcagaactataaacgtcatatggatggcatgtat
gggcctccagcaaaacgccatgaaggggatatgtataacatgcagtatggcaatcagcag
caagaaatgtataaccagtacagtaacacttactctggaccagacaggaggcctatccag
ggacagtatccatatccttataacagggagaggatgcagggccccggacaaatccagcag
catggaatacccccgcagatgattggtggccccatgcagtcatcatccaccagtgaaggt
cctcagcagaacatgtggccaacacgaaatgatatgccttacccttaccagaacaggcaa
ggccctggaggccctgcacaggctccaccctatccagggatgaaccgcactgatgatatg
atggtacctgaccagaggataaaccatgagagtcagtggccttctcatgtcaaccaacgt
cagacttcttacatgtcatcctcagcctccatgcagcctatcactcgacctcctcagtca
tcctaccagacaccaccctcaatgccaaaccacatctctagggctccaagtccagcatcc
ttccagcgctctttagagaaccgtatgtctccaagcaagtctcctttcctaccctctatg
aagatgcagaaggttatacccacagttccagtgtcacaagtcacaggacctccaccccag
ccaccaccaattaggcgagaaattactttccctccaggctctgtagaagcatcgcaacca
gtcttaaaaccaagacgaaagattacctcaaaagatattgtaactcctgaggcctggcga
gtgatgatgtctcttaaatctggccttttggctgaaagtacctgggctctagacactatt
aatattcttctgtatgatgacagcactgttgctactttcaacctttcgcagttatctgga
tttcttgagcttttggtagaatatttcagaaaatgcctgattgacatttttggaatcctt
atggaatatgaagtgggagatccaggtcacaaagcacttgatcacaacgcagtcaagaag
gatgacagccagtccttagcagtggatacgggaaaagaggaggaaaatgatgaatgtatt
gactactttgaggaagaggaggaggaagagtgggaggaggaagatgaaatagaaaaaaca
gaaggagaagaaaagagcactgtttttgccactcccagtgccattgctgatccaagtgag
aggccaaaacaagccagtaaatttgacaagctgccaataaagattgtaaagaaaaataat
ctatttgttgttgacagatctgacaaactggggcgtgttcaggaattcaacagtgggctt
ctccactggcagcttggggggggtgatacaactgaacacatccagactcactttgagagc
aagatggagattcctccacgaaggagggcccctccggccttgaactctccaagcaaaaag
aaggatctagaggggaaaggtgaacctgaagaacaacacgaaaaaagtataacagctacc
atcgatgatgtcctgtcagctcgaccaggagcattgcctgaagactcaaaccctggttcc
cagacagagagcagtaaatttccctttggaatccatcaagccaaaagccaccggaatatt
aaactgctagaagatgagccaaggagtcgggatgagactcctctatgcaccataactcat
tggcaagactccttggctaaacgctgcatctgtgtgtcaaatattgtccgtagcttgtct
tttgtgcctggcaatgacgccgaaatgtccaaacatccaggcttggtgctgatcctggga
aagttgatcctccttcaccatgagcatccggaaagaaagcgagcgccgcagacatatgag
aaggaggaagaggaggacaaaggggtggcctgcagcaaggatgagtggtggtgggactgc
ctcgaggtcttgagggataatacattggtcacattagccaacatttctgggcagctagac
ttgtctgcttatacagaaagcatctgtttgccaattttggatggcttgctgcactggatg
gtgtgcccatctgcagaggcacaggatccttttccaaccgtggggcccaactcagtccta
tcgcctcaaagacttgtgctggagaccctgtgtaagctcagtatccaggacaataatgtg
gaccttatcttggccactcccccattcagtcgtcaggagaaactctacgctactttagtt
aggtacgttggggaccgcaaaaacccagtctgccgagaaatgtccatggctctcttatcg
aaccttgcccagggggacgtgttagcagcaagggcaatagctgtgcagaagggaagcatt
ggaaatttgataagtttcttggaggatggggtcactatggcccagtaccaacagagccag
cataacctcatgcacatgcagcctccacctctggagccacctagcgtagacatgatgtgc
agggcagccaaggccttgctagccatggctagagtggacgagaaccgctcagagttcctt
ttgcatgagggtcgtttgctggatatctcaatatctgctgtcctgaactctatggttgca
tctgtcatctgtgatgtactttttcagattgggcagttatga
DBGET
integrated database retrieval system
