Chelonia mydas (green sea turtle): 102937999
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Entry
102937999 CDS
T02989
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102937999 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cmy04091
]
102937999 (FREM1)
Lectins [BR:
cmy04091
]
C-Type lectins
Lecticans
102937999 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
102937999
NCBI-ProteinID:
XP_007053493
LinkDB
All DBs
Position
5:complement(106326412..106423891)
Genome browser
AA seq
2185 aa
AA seq
DB search
MKPFENSSLFPLLAVILRCVCSSFISVNLGVKVMKGQSVFLSEDDLQFSIPREKDACKVE
VVMNEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDMVVLRLYRFTETETFTEMF
ILQVQLLEPDCNIIKMSTNVLEVPEFYGLSREIDKNVLTFDYDKKTNLECTIRLASLETL
LPAHGQLVIGEPQQEEPRGDQPHSFFPRSKHRTSQRCASGNCVPELKVIQNTKMSCEEFL
LMGIRYQHLDPPSPNIDYIPIRLDLTDSRSKTLHKTEHAWLPVRIKGAIPNQNPRAAFMA
MFILEVDQFILSPMTTTTVDAEDSETPKSLLVFNITKPPPQGYITHLLDHTKPITSFTWK
DLSEMLIAYQPPNNSHTERRNYEVELEVHDFYFERSSPITVHISIRTTDTNAPRVSWNTG
LDLLEGQSRPITWQQFQIVDNDNIRGVRLVTVDGLQHGRLTVRGGKGFMFTVSDLRAGAV
RYHHDDSDSTKDFVVFRIFDGHHSIRHKFPINILPKDDSPPFLISNVVIELYEGQTILIQ
GYMLQASDMDSSDDYILFNVTKPPQAGEIMKKPGPNLIGYPVAGFLQRDLFNGLIYYRHL
GGEIFEDSLEFVLCDSHDPPNLSEPQVVIVHIIPVDDQLPKEASGVTRHLTIEETKIAHL
TKKHLHFIDMEAQERELIYTVTTSPFFSSTHGPSDAGKLFMVDSIPKLVKDLSAPALRSF
TQHAVNYMKVAYMPPIQDIGPEPQHVQFIFSVSNQHGGTLFGICFNITVLPVDNQAPEVF
TNNLKVEEGGLCTITGSHILLSDMDTKQETLHIYLQRQPLHGMVELDGFPMTDGDRFTCQ
DLHMLKVRYQHDGSETLQDDILFAATDGINSLEFVLRVKVLPVNDEPPIMKDGLIPLIRC
PEGEEVVITSEYLCATDADSDDMRLTFMLARQPNYGVVRKAGVVVDLFSQADVVSGVVTY
KHTSGEIGLTPCFDTLTLVISDGEAGVDVNDCCYDGLLPPPIPLHDSFPVYDLNISVFPV
DNQPPSIAIGAMFVVDEGFSAVITANNLFATDPDTAADDLEFVLVSPPQFGYIENILPSP
GFEKSNIGISIGSFQLIHLKALQINYVQSRHMRTEPTSDQFMIYVTDGKHHSVETPFYVL
INPTNDEVPEFIARNITVQEGQMKELDPSVINVLDLDVPQDHLRFTVVQQPQHGFLIHGV
YGNDVMSYKRFISSHHSHERPVHDFSMELLKNGMRLVYMHDDSENLTDGFTLQLSDGKHK
VLRTILVKVIPVNDEKPMLSKKDEIVVNMGETRIISSAVLSAEDKDTPRERIYYLFERIP
ENGQLQLKVGKDWVTLQTEMKCTQEEIDMNLVRYVHTGAMGSRNQDSFTFHLWDGDNKSP
PLDFYITIKDMEKGDIAVFVRPLTVSKGDRGFLTTDVLLAIDGTDKPEELLYVITSPPQY
GQIEYVSYPGVPITSFSQMDVAGQAVCYVHNSKAAVPRDLFRFIISNGLKTKHGTFEITL
ETVDQALPIVSRNKGLRLVEGTMALLSPDVLQLSDPDTSSKNLTFLLAQLPQYGHLCYRG
AVLLHHNFTQQDVDNMDMAYRHGGGASQIDRFTFVATDRTNEGFIIDGKVQMEPVAFTIQ
VDHLDKTAPKIVHLRCSSDVERLKNGNYGIYITARSLKAYDPDTEEDKVIFKILRGPRFG
YLENITTGGFIQEGFSQKDLNGKIIFYVINPSWEVNSDSLEFQVTDPTGNSAAPQTLELR
WSQIEMQQAEYEVCENVGMLSLKITRSGHSIDSAFIAVKVNEVSATLGKDFTVTPSKLIQ
FDPGMSTKTWNIAITYDGLEEDDEVFEVVLNSPVNAVLGTRTKAVVKILDSKGGQCSSFR
SSGQNKPNLWGTGTLLPVSSGSSSPSNPGTVHLEEIPLSSSRVMMVDRGDVLQEFNLVNL
SRMRLRAVRNGKIVHPSSVLRNGTHVAFKYHGLVSLRVEDDTSPANVNKANKSIINQGQT
KINVISSRKTEVPQADKAELMSESHSSHQDLVLSFPKSCTPDLDGLLHFEEGTQNLFQCD
GISWKLWTSESKDVSMKKCPSGWSHHGSSCYFLITDQKVTWNTAARACREQYFGSLASVV
TKQHMQWLWDFSGRKPFWIGFNDQVNPGHWEWNGGEPVTFTNWRRSPSRLSKQGKNCVLV
QRRGKWQAKDCRKGNRHNYVCSRKL
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atgaagccttttgagaatagcagtttgtttccactgctcgctgttatcctgagatgcgtc
tgctcctcctttatcagtgtcaaccttggggtgaaagtgatgaagggccagtctgtcttc
ctgtcagaagatgacctgcagttttccattcccagagagaaagatgcttgcaaagtggaa
gttgtgatgaatgagccaataacacagagggttgggaaactaactccacaggtatttgac
tgtcatttccttcctaatgaagtcaagtatactcataatggctgtccaattttggatgaa
gacatggtcgtgcttaggctgtacagatttacagaaacagaaacattcacagaaatgttc
atccttcaagttcaattacttgagccagattgtaatatcatcaaaatgagcaccaatgtg
ctggaggtccctgagttttatggcctgtccagggagattgacaagaatgtgctcactttt
gactatgacaagaagacaaacctggagtgtaccatcagacttgcctctttagaaactctt
ctaccagcccatggtcaacttgtcattggagaacctcagcaagaagagcctcgtggagat
caacctcatagcttcttccctagatccaagcacagaacaagtcaaaggtgcgcgagtggg
aactgtgttccagaactgaaggtgattcagaacaccaaaatgagctgtgaggaatttttg
ctgatgggaattagatatcagcatcttgaccctccttcacccaacattgattatattcct
atcaggctggacctcacagacagcagaagcaaaactctgcacaagacagagcatgcatgg
ctccctgtccgaatcaaaggtgccattcccaaccaaaaccccagagctgccttcatggct
atgttcatcctggaggtggaccagtttattttgagccccatgacaacaacaacagtggat
gctgaagacagtgaaacacccaaatccctgctagtgttcaacattaccaagccaccccca
caaggctacatcactcatctgttagaccataccaagcctatcacttccttcacgtggaaa
gatctcagtgagatgcttatagcatatcagcctccaaacaacagccatacagagaggagg
aattatgaggtggagttagaggttcatgacttctactttgaaaggagttcaccaatcact
gtgcatatttccatcagaacaacagatacaaatgctcctcgggtgtcatggaatacaggc
ctcgatctcctggaagggcagtcccgaccaatcacgtggcaacagtttcaaatagtggac
aatgacaacatcaggggtgttcgcctggttacagttgacggcttacagcatggacggctc
actgtaagaggagggaaaggattcatgttcacggtctctgaccttagggctggggctgtt
cgctaccaccatgatgacagtgactctacaaaggattttgtggtatttaggatctttgat
ggccaccacagtattcgccataagtttccaatcaatatcctgcctaaagatgacagcccc
cctttccttatcagcaatgttgtaattgaactgtatgaagggcagaccattctgatccag
ggctacatgcttcaagcttctgacatggactccagtgatgactacatactctttaatgtt
accaaaccaccacaggctggagaaatcatgaagaaaccagggccgaaccttatagggtat
cctgtcgctggcttccttcagagagatctgtttaatggactaatttactaccgtcacttg
ggaggagaaatatttgaggattcccttgagtttgtcctgtgtgatagccatgaccctccc
aatctctcagagccacaggtggtgatagtgcacattattcctgtggatgatcagcttcca
aaagaagcttctggggttacccgccacctcactatcgaggaaactaagatagctcatcta
actaagaaacatctccatttcatagacatggaagcacaagagagggaactcatctacaca
gtaaccacctccccatttttctcttctactcatggcccctccgatgctgggaagttgttt
atggtggacagcatccccaaactagtcaaggatctttctgctccagcactgagatcattc
actcagcatgctgtgaactacatgaaagttgcctatatgccccctatccaggacattggg
cctgagcctcagcatgtccagtttattttttcagtcagcaatcagcatggaggcaccttg
tttgggatctgctttaatattacagttcttccagtggacaatcaagctccagaggtattt
acaaataacttgaaagtggaagaagggggactatgcaccattacagggagccatattctg
ttgtcagatatggacacaaaacaggagaccctccacatctaccttcagaggcagccgttg
catggaatggtagaactggatggatttcccatgactgacggtgacaggttcacctgccag
gacctgcatatgttaaaagtcaggtatcagcatgatggctctgagactctgcaggatgac
atcctctttgcagccacagatggcattaattctttagagtttgtcctacgggtcaaggtg
ctccctgtaaatgatgagccgcctatcatgaaagatggcctcattcccctaatacgatgt
ccagagggtgaggaagtggtcatcacctcagagtacctttgtgccactgacgcagacagt
gatgacatgagactgacttttatgctggctcgacagcccaactatggggttgtgaggaaa
gctggtgtcgttgtggatctcttctcccaagcggacgttgtctctggagtagtgacctac
aaacatactagtggggagattggcctgactccttgctttgacaccctaactttggttatc
tctgatggtgaagctggcgtggatgtgaatgactgctgttatgatggacttcttcctcct
ccaataccacttcatgattcctttccagtatatgaccttaacatcagtgtatttccagtg
gacaaccagccaccatccattgcaattggtgccatgtttgttgtggatgagggtttctca
gctgtcattaccgctaacaatttgtttgctactgaccccgacaccgcagcagatgactta
gagtttgttttggtttctcctccccagtttggttacattgaaaatatactaccttcccct
gggtttgagaagagcaacattggtataagtataggttcatttcagctgatacacctgaaa
gccttgcagataaattatgtgcagtccaggcatatgaggacagaaccaacttcagatcag
tttatgatttatgtcactgatgggaagcatcattcagtggagaccccattttatgtcctg
atcaacccaacgaatgatgaagtcccagaattcatagcaaggaacataactgtgcaggag
ggccaaatgaaagaactggatccctctgtaatcaatgtccttgatctggatgtaccgcaa
gatcatttgagatttaccgttgtccagcaaccccaacatggattcctcattcatggagtc
tatggcaatgatgttatgagttacaaaagattcattagcagtcaccacagtcatgaacgt
cctgtgcatgacttttccatggagcttcttaagaatggaatgaggctggtgtacatgcat
gatgactctgaaaatctcactgatggttttacactccagctgtcagatgggaaacataaa
gtcctcagaaccattctggtaaaggtcatcccagttaatgatgagaaaccaatgctgagc
aagaaggatgagatagtggtgaacatgggtgaaacccgaataatttctagtgctgttctg
tcagctgaagataaagacacccccagggagagaatttactatttatttgaaagaattcca
gaaaatgggcagcttcagctcaaggtaggtaaggactgggtgacgctccaaactgaaatg
aagtgcactcaggaggaaatagatatgaaccttgtgagatatgtgcatacaggagctatg
gggtccaggaaccaagacagcttcacatttcatctgtgggatggggacaacaaatcccca
ccactggacttctacataactatcaaggatatggaaaaaggggacattgctgttttcgta
aggccacttactgtatctaagggggacagaggtttcttgacaactgatgttctccttgca
attgatggaactgacaaaccagaagagctcctctatgtgataacctccccacctcagtat
ggacagatagagtatgtcagctatcctggagtccctattacaagtttcagccaaatggat
gtagcaggtcaagcagtctgctatgtccacaatagcaaggcagctgttccccgagatctg
ttcagatttatcatcagcaacggactgaagactaaacatggaacgttcgagatcacgctg
gagacagtggaccaagctttgcccatagtgtctaggaacaaggggttaagattagtggaa
ggcactatggcactcctttctcctgatgtcctgcagctttcagatcctgacacttcctca
aagaaccttactttcctcttggcacagctccctcaatatggccatctgtgctaccgtggg
gcagtgctgctgcatcacaatttcacccaacaagatgtggacaacatggacatggcatat
agacatggaggaggggcttcccagattgacagatttacctttgttgcaacagataggact
aatgaaggcttcatcatagatgggaaggtgcaaatggagcctgtggcattcaccattcag
gtggaccatttggacaaaactgcaccaaaaattgttcacctccgttgttcttctgatgtg
gagcgcctgaaaaatggcaattatgggatttacattactgccaggtccttgaaggcatat
gaccccgatacagaagaggataaagtcatttttaagattttacgaggtccacgttttggc
tacctggaaaatataacaacaggtggatttatacaggaaggattcagccaaaaggattta
aatggcaaaatcatattttatgtcatcaatccatcctgggaggtgaattcggacagcttg
gagtttcaagtcacagatcccaccggaaactctgctgccccccaaactctggaactgagg
tggtctcaaattgaaatgcaacaagctgagtacgaagtatgtgagaatgtgggaatgttg
tctttgaaaatcaccagatcggggcactccatagactctgcctttattgcagtgaaggtt
aatgaagtgtctgctacattgggaaaggattttactgtgactccctctaagctcattcag
tttgatccaggaatgtcaaccaagacgtggaatatagcaattacttatgacggattagag
gaagatgatgaggtctttgaagtagttctgaactcccctgtgaatgcagttcttggcacc
aggacaaaagctgtagtgaaaattctggactcaaaaggaggtcaatgcagctctttccgt
tcctctggccaaaacaagcccaacttatgggggacaggcacattgcttccagtttcctca
gggtcctcatcgccctccaatcctggcactgttcacttggaagaaatcccgctgtcctct
tccagagtgatgatggtggatagaggggatgtgttacaggaattcaacttggtgaatctg
tcaaggatgaggcttagagctgtcagaaatggcaaaatagttcatccttcatctgtgtta
agaaatggaacccatgtggcttttaaatatcatggattggtgtctctcagagtagaggat
gacacctcaccagctaatgtaaacaaggctaacaagtcaataattaaccaagggcagaca
aagataaatgtgatatcctccaggaagacagaagtcccacaagctgataaggcagagctg
atgtctgaatcacactctagccaccaggacctggtcctctcctttccaaagagctgcacg
cctgatttagacgggctcttgcattttgaagaaggcacccaaaacttatttcaatgtgat
ggaatttcgtggaagttatggacttcagaaagcaaggatgttagcatgaaaaaatgtcca
tctggatggagccatcatggcagcagctgctatttcctgatcacagaccagaaagtcact
tggaatacagctgctcgggcttgccgggagcaatactttggaagtctagcaagtgtggtc
actaaacaacacatgcagtggctgtgggacttcagtggcaggaagcccttttggataggc
tttaatgatcaagttaatcctggccattgggagtggaatggaggagaacctgtcaccttc
acaaactggagaagaagtccatctcgcctttcaaagcaaggaaagaattgtgttttggtg
cagaggcgagggaaatggcaagcaaaagactgtaggaagggtaatcggcacaactatgtc
tgctcaagaaagctgtaa
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integrated database retrieval system
