Chelonia mydas (green sea turtle): 102938052
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Entry
102938052 CDS
T02989
Symbol
NECTIN1
Name
(RefSeq) nectin-1 isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03266
Virion - Herpesvirus
cmy04514
Cell adhesion molecule (CAM) interaction
cmy04517
IgSF CAM signaling
cmy04520
Adherens junction
cmy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
102938052 (NECTIN1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102938052 (NECTIN1)
04517 IgSF CAM signaling
102938052 (NECTIN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102938052 (NECTIN1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102938052 (NECTIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmy04515
]
102938052 (NECTIN1)
04090 CD molecules [BR:
cmy04090
]
102938052 (NECTIN1)
Cell adhesion molecules [BR:
cmy04515
]
Immunoglobulin superfamily
Nectin family
102938052 (NECTIN1)
CD molecules [BR:
cmy04090
]
Proteins
102938052 (NECTIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
ig
Ig_2
I-set
Ig_6
Ig_PVRIG
C1-set
Insulin_TMD
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
102938052
NCBI-ProteinID:
XP_037738184
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All DBs
Position
22:12718838..12873161
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AA seq
523 aa
AA seq
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MAPHRRSSRPGCWWTTGVCLLVASLFPGLRAQTVLVNDTVSGFIGTDVVLHCSFTNPLPS
VKITQVTWQKATNGSKQNVAIYNPAMGVSILSPYKERVTFRNPSFKDGTIQLSRLELEDE
GVYICEFATFPTGNRESQLNLTVLAKPTNRMESTTRPLVARSGKTEKILVATCMSSNGKP
PSTVTWDTKLKGEAEFQEIKNSNGTITVISRYRLVPSREAHRQQLMCVVNYQLDRFTDSM
TLNVQYEPEVTIEGFDGNWFLNRKDVKLTCKSDANPPATTYQWRLLNGSLPENVEVQNNT
LFFKGPVSYSLAGTYICEATNTIGTRSGLVEVNVTDKPLPQGPPGGIIGILGGVIAAALI
IGVAVTVFIIYRRQQKSRTETDNDLIDLPPSHKPAPPPKRKQEMKSHLTAEDIQVVHLDN
MKQEEEIQKLPLQTPYYDMAASEPSPYSDKLNFGKCHSEIPDASDHLTCCCSPEDQYLEK
IPSVYNPLSYLPEDLYPHRADISFCCPPPGSRAPYICPKEQYV
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggctccgcaccggcggtcgagtcgcccggggtgctggtggactactggagtttgcttg
ctggtggcttccctcttcccagggctccgggctcagaccgtcctggtcaatgacacagtc
tcggggttcatcgggacggatgtggtccttcactgcagcttcaccaacccgctccccagt
gtgaagatcacgcaggtcacgtggcagaaggccaccaatggctccaagcagaatgtggct
atctacaaccctgccatgggagtctccatcctctccccctacaaggagcgcgtgaccttc
cgtaacccctcctttaaggatggcaccatccagctgtcccggctggagctggaggatgag
ggcgtgtacatctgcgaatttgccaccttcccaaccggcaaccgggagagccagctgaac
ctcaccgtgctggccaagcccaccaaccggatggagagcaccacccggcccctcgtagcc
agatccggcaagacggaaaagatcttggtagccacctgcatgtcctccaatgggaagccg
cccagcaccgtcacctgggacaccaagctcaaaggggaggcggagttccaggagatcaag
aacagcaacggcaccatcacggtgatcagccggtaccgcctcgtgccgagccgggaggcc
caccggcagcagctcatgtgcgtggtcaattaccagctggaccgtttcaccgacagcatg
accctcaatgtgcagtatgagccagaagtcaccatcgagggctttgacggcaactggttt
ttgaaccggaaggatgtgaaactgacgtgcaaatccgatgccaacccccccgctaccacc
taccaatggaggctgctgaatggctcactgcccgagaacgtagaagtccagaacaacacc
ctcttcttcaaaggacccgtctcctacagcctggcagggacatacatctgtgaggccacc
aacaccatcggcacgcggtcggggctcgtggaagtcaatgtcacagataagccgctgccg
cagggacccccagggggcattatcgggatcctggggggcgtaattgctgcggctctcatc
atcggcgtggccgtcactgtgttcatcatctacaggcgacagcagaagagccgcacggag
accgacaatgacctaattgatctgcctccgtcccacaaacctgccccgccaccaaagagg
aaacaggagatgaaaagccacctgacggcagaagacatccaggtcgtccacctagacaac
atgaagcaggaggaagagatccagaagctccctctgcagacgccgtactacgacatggca
gccagcgagccctctccgtactctgacaagctgaactttggaaagtgtcactcagagata
ccggatgcgagtgatcacctgacctgctgttgctcacctgaagatcaatatctggagaaa
atacccagtgtctataaccccttatcgtatctcccagaagatctgtatcctcaccgtgct
gatatctccttttgctgcccaccaccaggttcccgggcgccgtacatctgtcctaaggaa
cagtatgtttaa
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