Chelonia mydas (green sea turtle): 102938055
Help
Entry
102938055 CDS
T02989
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03082
ATP-dependent chromatin remodeling
cmy03083
Polycomb repressive complex
cmy04110
Cell cycle
cmy04330
Notch signaling pathway
cmy04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102938055 (HDAC1)
03083 Polycomb repressive complex
102938055 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
102938055 (HDAC1)
04350 TGF-beta signaling pathway
102938055 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102938055 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmy03036
]
102938055 (HDAC1)
Enzymes [BR:
cmy01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
102938055 (HDAC1)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
102938055 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
102938055 (HDAC1)
BRAF-HDAC complex
102938055 (HDAC1)
REST complex
102938055 (HDAC1)
SHIP complex
102938055 (HDAC1)
MiDAC complex
102938055 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
102938055 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
102938055 (HDAC1)
Chromatin remodeling factors
NuRD complex
102938055 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
102938055
NCBI-ProteinID:
XP_007067627
LinkDB
All DBs
Position
19:complement(6560803..6581029)
Genome browser
AA seq
480 aa
AA seq
DB search
MALTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTASFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVISKVMETFQPSAVALQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQPIPEDAVQEDSGDEDEEDPDKRISMRSADKRIACDEEF
SDSEDEGEGGRKNVANFKKSKRVKAEDDKEEEEKKDEKEEEKAKEEKAEPKGVKEETKSA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacacaggggaccaagcggaaagtctgttactactatgacggggatgttgga
aactactattatggccagggccatccaatgaaaccccacaggatccgaatgacccacaac
ctactgctgaactatggcctttacagaaaaatggagatctatcgcccccacaaagcaaat
gcagaagaaatgaccaagtatcatagtgatgactacattaaatttctgagatctattcgc
cctgataacatgtctgagtacagcaagcagatgcagagattcaatgttggggaagattgc
ccggtgtttgatgggttgtttgaattttgtcagctgtcggcaggaggctctgttgccagc
gctgtgaagctgaacaagcaacagacagatattgctgtgaattgggcaggaggccttcac
cacgccaagaagtcggaggcttctggcttctgttatgtcaacgacattgtgttagccatc
ttggagctattaaagtaccaccagagggtgctgtatattgacattgatattcaccatgga
gatggcgtggaggaagccttttacaccacagaccgtgtcatgactgcatcctttcataag
tacggagaatacttcccaggaacaggggatctgcgggatattggtgcaggcaaaggcaag
tattatgctgtcaactatcctctccgggatggaattgacgatgaatcctatgaggcgata
tttaagccggtgatatctaaagtgatggagacgttccagcctagtgcagttgccttacag
tgtggatcggattctctgtcaggggacagattgggctgttttaatctgaccatcaaaggt
catgccaagtgtgtggagttcgtaaagagttttaacttgcctatgctgatgctaggagga
ggtggctacacaatccgcaacgtggctagatgctggacttatgagactgctgtggctttg
gacacggaaattccaaatgagcttccatataatgactattttgaatactttggaccagac
tttaagctccacatcagtccttcgaacatgaccaaccagaacaccaatgagtatcttgag
aagattaagcaacggctatttgagaatctgcgcatgctccctcatgcccctggtgtccag
atgcagccaattcccgaggatgccgtgcaggaggacagcggagatgaagatgaagaggat
cctgacaaacgcatttcaatgcgctctgccgacaagagaatagcctgtgatgaagaattc
tcagactctgaagatgaaggggaaggtggtcgcaaaaatgttgccaattttaagaagtca
aagcgtgtaaaagcagaagatgataaggaggaggaggagaagaaagatgagaaagaagag
gaaaaagccaaagaggagaaagcagaacccaaaggggtaaaggaagagactaaatcggcc
taa
DBGET
integrated database retrieval system
