Chelonia mydas (green sea turtle): 102938142
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Entry
102938142 CDS
T02989
Symbol
SF1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102938142 (SF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmy03041
]
102938142 (SF1)
Spliceosome [BR:
cmy03041
]
Complex A
Other components
Complex A specific factors
102938142 (SF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
102938142
NCBI-ProteinID:
XP_037759835
LinkDB
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Position
7:complement(32414274..32431523)
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AA seq
776 aa
AA seq
DB search
MAATGANATPLGKLHPPPPPGKPGYPMPPPGPPGLVLPGPPPPPPPGPGQAQAALLGPMA
AAAYPFAALPPPPPPPPPPPPPPQPQPPPQQPQPPPPPPPPPPPQQQQPPPQAGGPQPPP
QYGQYRYPSPPPPPQGHEQQQPPPPQQQQQDESGPGGGSNHDFPNKKRKRSRWNQDTMEQ
KTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNS
EGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPE
INFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTA
NTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSAE
TRSITNTTVCTKCGGAGHIASDCKFSRPGDPQSAQDKARMDKEYLSLMAELGEAPVPASV
GSSSGPTNTPLSSGPRPSGPGNNPPPPNRPPWMNSGPSDNRPYHGMHGGPGGPGGPHNFH
HPMPNMGGHGGHPMQHNPNGPPPWMQPHHPPMNQGPHPPGHPGPHHMDQYLGNTPVGSGV
YRLHQGKGMMPPPMGMMAPPPPPPSGQPPPPPSGPLPPWQQQQQPPPPPPSSSMASSTPL
PWQQNTTTTTTTSAGTGSIPPWQQQGAAVAASTGAPQMQGNPSMVPLPPGVQPPLPPGAP
PPPPPPPPGSAGMMYAPPPPPPPMDPSNFVTMMGMGVPALPPFGMPPAPPPPPPQN
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgactggagccaacgccacgccgctagggaagctccatccacccccaccgccg
gggaaaccgggctacccgatgcctccaccgggtcccccagggctggtccttccaggccct
ccccctccaccacccccaggcccgggccaggcccaagccgctctgttaggccccatggcg
gctgctgcctaccccttcgccgcgctgccgccgccgccccctcctcctccgccgccccct
ccgccaccccagcctcagcccccgccgcagcagccgcagcccccgccgcccccaccccct
cctcctcccccgcagcagcaacagccgccacctcaggctggggggcctcagcccccccct
cagtacggacaataccggtacccgtcgccgccgccgcccccgcagggccacgagcagcag
cagccgccgccgccgcagcaacagcagcaggatgagagcggcccgggagggggcagtaat
cacgatttccctaataagaagcggaagagaagcagatggaaccaagacaccatggaacag
aagactgtcatcccaggaatgcccactgttatccctcctggactcactcgtgagcaagag
agagcttatatagtgcaactgcagattgaagacctgactcgtaaactgcgcacaggagac
ctgggcatcccccctaacccagaggacaggtccccttcccctgagcccatttacaatagc
gaggggaagcgcctgaatacccgtgagttccgcacccgcaagaagctggaggaggagagg
cataacctcatcacagaaatggtggccctcaacccggacttcaagccaccagctgattac
aaacctccagcgacccgcgtgagtgataaggtgatgatcccacaggatgaatatcctgag
attaactttgtggggcttctgattggacccagaggtaatacgctgaagaatattgagaag
gaatgcaatgccaagatcatgatccggggcaaggggtcggtgaaggaagggaaggtgggc
cgaaaagatggccagatgctgcctggagaagatgagcctcttcacgctctggtcactgcc
aacaccatggagaatgtgaagaaggctgtggaacagatccggaatattctgaagcaaggc
attgaaacaccagaggaccagaacgacttgcggaagatgcagctgcgtgagctggcccgg
cttaatgggactctgcgggaagatgacaacagaatcctgcggccttggcaaagcgcggag
acccgcagcatcaccaacaccactgtgtgtaccaaatgcggaggagctggacacattgcc
tctgactgcaagttctctagacctggtgatcctcagtctgctcaggacaaagcccgcatg
gacaaagaatacctgtccctgatggcagagttgggagaagcgccagtcccggcatctgtg
ggatcttcctctggccccaccaatacacctctgtcaagtgggcccagaccctcgggacca
ggaaacaacccgccgcctcctaaccgtcctccatggatgaactctggcccctctgataac
cggccctaccatggcatgcatggaggacctggaggtccaggtgggcctcacaacttccac
caccccatgcccaacatgggtgggcatggtggccatccaatgcagcacaatcccaatggc
ccaccaccctggatgcagccacatcatccacccatgaaccaggggccacatcctccaggt
cacccgggcccccaccacatggatcagtacctgggaaatacgcctgtgggctctggggtc
tatcgcctacatcaaggaaaaggtatgatgccgccgccgatgggtatgatggccccgccg
ccccctccgcccagtggtcagcctcccccgcctccctctggtcctctccccccatggcag
cagcagcagcagcctccgccgccacctcccagcagcagtatggcgtccagtactcccttg
ccatggcagcaaaatacgacgaccaccaccaccacgagcgctggcaccgggtccatcccg
ccatggcagcagcagggggctgcggtggcggcttctacgggggccccgcagatgcaaggc
aacccctccatggtccctttgcctccaggggtccagcctccgctgccgcccggggccccg
ccgccgccgccgccgccgccgcctggctccgcgggcatgatgtacgccccgccccctccc
ccgccccccatggacccttctaatttcgtcaccatgatggggatgggggtgccggccttg
ccaccattcggcatgccccccgcgcctccgccacccccaccacagaactga
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