Chelonia mydas (green sea turtle): 102938237
Help
Entry
102938237 CDS
T02989
Name
(RefSeq) sodium channel protein type 1 subunit alpha isoform X2
KO
K04833
voltage-gated sodium channel type I alpha
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmy04040
]
102938237
Ion channels [BR:
cmy04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102938237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
FraC
ATP-synt_B
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
102938237
NCBI-ProteinID:
XP_037768511
LinkDB
All DBs
Position
11:complement(36197460..36368938)
Genome browser
AA seq
2011 aa
AA seq
DB search
MEQSVLVPPGPDSFHYFTRESLAAIEQRIAAEKAKCSKQDRKDDDENGPKPNSDLEAGKS
LPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNRGKAIFRFSATSALYILTPFNPLRKI
AIKILVHSLFSMLIMCTILTNCVFMTMSNPPEWTKNVEYTFTGIYTFESLIKIFARGFCL
EDFTFLRDPWNWLDFTVITFAYITEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLQWPPDNFTLETNITSYFNSTIG
ENGTFVNLTVTPFDWKGYTEDEGNFYVLEGQNDALLCGNGSDAGQCPEGYICVKAGRNPN
YGYTSFDTFSWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLIL
AVVAMAYEEQNQANMEEAEQKEAEFQQMLEQLRKQQEAAQAAAVATASAGSRDPSAEGGI
GGLSESSSDASKLSSKSAKERRNRRKKRKQKEQYGGEEKDEDEFQKSESEGSIRKKTFRF
SIEGNRLTYEKKYSSPHQSLLSIRGSLFSPRRNSKTSLFSFRGRARDIGSENDFADDEHS
TFEDNDSRRDSLFVPRRHGERRNSNISQASRSSKVQAVFPANGKMHSTVDCNGVVSLVGG
PSVPTSPVGQLLPEVIIDKPATDDNGMTTETETRKRRSSSFHVSMDFLEDPAQRERAMSI
ASILTNTMEELEESRQKCPPCWYKFANIFLIWDCSPHWLKVKHIVNLVVMDPFVDLAITI
CIVLNTLFMAMEHYPMTEEFSNVLSVGNLVFTGIFTAEMFLKIIAKDPYYYFQEGWNIFD
GFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLV
LAIIVFIFAVVGMQLFGKNYKECVCKIASDCVLPRWHMQDFFHSFLIVFRVLCGEWIETM
WDCMEVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAV
ARIEKGIDYVKRKVREFIQKAFIKKQKALNEIKPLEELNKKDSCISNHLTVEINKDLDYL
KDGNGTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESD
LEESKEKLNLSSSSEGSTVDIGHPEEEQHAAEPEEVAEPEACFTEGCVRRFKCCQVSLEE
GRGKQWWNLRKTCFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKV
FTYIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTL
RALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVN
TTTDKRFEVDRINNFSQCEELIKNNETARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIM
YAAIDSRAVQDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDI
FMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTKQVFDIGIMILICLNMVTM
MVETDDQSDEMQTILQRINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVG
MFLAKVIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLF
LVMFIYAIFGMSNFAYVKREAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGE
PDCDPNKPHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAE
PLSEDDFEMFYEVWEKYDPDATQFMEFEKLSDFAAALDPPLHLAKPNKVQLIAMDLPMVS
GDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMASNPSKASYEPITTTLKRKQEEAS
AVIIQRAFRRYLLKRTVKQASFAYNKNKIQGGVGQCIKDEILIDKLNENSFTEKTDMTTS
TAVCPPSYDCVTKLVKEKHEKEDKDVRKKEK
NT seq
6036 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtcagtgcttgtaccaccaggacctgacagcttccactacttcactagagag
tctcttgcagctattgaacaacgcattgctgcagaaaaggctaagtgttccaaacaagac
cgtaaagatgatgatgaaaatggcccaaaacctaatagtgacttggaggcaggaaagtca
cttccatttatttatggtgacatacctccaggaatggtgtccgagcccttggaggatctg
gacccatattatatcaataaaaaaacttttatagtattgaatagagggaaggcaatcttc
cgattcagtgccacctctgccctgtacattttaactcctttcaatcctcttagaaaaata
gctattaaaattttggtacattcattgttcagcatgcttattatgtgcactattttgacc
aactgtgtgtttatgaccatgagtaaccctccggaatggacaaagaatgtagagtatacc
ttcactggaatatatacatttgaatcacttataaaaatttttgcaaggggcttctgttta
gaagattttactttccttcgagacccatggaactggcttgatttcactgtcattacattt
gcgtatataacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcagagta
ttgagagctttgaaaactatttctgtaatcccaggcttgaagactattgtgggagcctta
attcagtctgtgaagaagctctcagatgtcatgattctgactgtattttgcctgagtgta
tttgcactaatagggctgcagctgttcatgggtaacttgaggcataaatgcttgcaatgg
cctccagacaattttactctggaaacaaatattacttcatatttcaacagcacaataggt
gaaaacggtacatttgttaatttaacagtgactccgtttgactggaagggctacactgag
gatgaaggtaatttttacgttctggaagggcaaaatgatgctctgctttgtggaaatggc
tcagatgcaggtcaatgtccagaaggatatatatgtgtgaaagctggtagaaatcccaac
tatggctacacaagttttgacacattcagctgggcattcttgtcactgtttcgactgatg
actcaagactactgggaaaacctttatcagttgacactacgtgctgctggcaaaacatac
atgatattttttgttctggtgattttcctgggctctttctatctgattaacttgatcctg
gctgttgttgccatggcctatgaagagcagaatcaagcaaacatggaagaagcggaacag
aaagaggcagaatttcagcaaatgcttgaacagctgagaaagcaacaagaagcagctcag
gcagcagcagtagcaacagcctctgctggatcaagagatcccagtgcagaaggcggaata
gggggactctcagaaagttcttctgatgcatcaaagttgagttcaaagagcgctaaagag
aggaggaacagaaggaagaagagaaagcagaaagaacaatatggaggagaagagaaggat
gaagatgaatttcaaaaatctgaatcagaaggcagcatcagaaagaaaactttccgattt
tccattgaagggaacagactgacatacgaaaaaaagtattcgtccccccaccagtctttg
ctgagcattcgtggctccctgttttctccaaggcgcaacagcaaaacaagtcttttcagc
ttcagaggtcgagcaagggatataggatcagaaaatgactttgctgatgatgaacacagc
acttttgaagataatgatagcagaagagattctctttttgtgccacgcagacatggtgaa
cggcgcaacagtaatattagtcaggccagtaggtcatccaaggtccaggcggtgtttcca
gcgaatgggaagatgcatagcactgtagattgcaatggagtagtttccctggttggtgga
ccatctgttcctacgtcgcctgttggacaacttctgccagaggtgataatagataaacca
gctactgatgacaatggcatgactactgaaacggaaacaagaaagagaagatccagttcc
tttcatgtttctatggattttctggaagaccctgctcaaagagagagggcaatgagtata
gctagcatactcacaaatactatggaagaacttgaagaatcaagacagaaatgcccacca
tgctggtacaaatttgcaaacattttcttgatatgggactgcagtccacattggttaaaa
gtaaaacatattgtcaatttagttgtgatggacccatttgttgatctcgctattactatt
tgcattgttttaaatacactatttatggccatggaacattatccaatgactgaagaattc
agtaatgtactttctgttggaaacctggtcttcactgggatcttcacagcagaaatgttt
ctgaagataattgccaaggatccttattattatttccaagaaggctggaatatttttgat
ggttttattgtaacacttagtttggttgaacttggtcttgcagatgttgaaggactatca
gttctccgatcattcagattgttacgagttttcaaattggcaaaatcttggccaacactg
aatatgctgataaagattattggtaactcagttggggctctgggaaatttgaccttggtg
ctggccatcattgtcttcatttttgctgtggttggtatgcagttgtttggtaaaaactac
aaggaatgtgtctgcaaaatagcaagtgactgtgtacttccacgctggcacatgcaagac
ttcttccactctttcttgatagtattccgagtgttgtgtggagaatggatagagactatg
tgggactgcatggaggttgcaggccaagctatgtgccttactgtcttcatgatggtcatg
gtgattggaaatctagtggttctgaacctatttttggccttgctactgagctcatttagt
gcagacaaccttgctgccactgatgatgataatgaaatgaataatctccagattgctgta
gcaagaattgagaagggaatagattatgttaaaagaaaagtacgtgaattcatccaaaaa
gccttcattaaaaaacaaaaagctttaaatgaaatcaaaccacttgaagaactaaacaaa
aaagacagctgcatttctaatcatctaacagtggaaataaacaaagaccttgattatctt
aaagatggcaatggaactagtggcataggcacaggcagcagcgtggaaaaatatatcatt
gatgaaagtgattacatgtcgttcataaacaacccaagcctcactgtgacagtaccaatt
gccgttggagaatcagactttgaaaatttaaatacagaagagtttagcagtgagtcggat
ctggaagaaagcaaagagaagctaaatttgtccagctcatctgaaggtagcacggttgat
attggacatcctgaagaagagcaacatgcagctgaacccgaagaagttgctgagccagag
gcctgttttacagaaggctgtgtacgaaggttcaagtgctgtcaagtcagcttagaagag
gggagaggaaaacaatggtggaatcttaggaaaacctgcttcaagatagttgaacacaac
tggtttgagactttcattgtctttatgattctccttagtagtggtgctctggcttttgaa
gacatatatatagagcagcgcaagactatcaagaccatgctggaatatgctgacaaggtc
ttcacgtacatcttcattctggaaatgctgctcaagtgggtggcatatggctatcaaaca
tacttcactaatgcttggtgttggctggacttcctaattgttgatgtctccttggttagc
ttaacagcgaatgcattaggttactcggaacttggtgccattaagtctcttaggacacta
agagctttgagacctctgagagccttgtcacgatttgaagggatgagggtggttgtgaat
gcccttttaggagcaattccatccatcatgaacgtgcttctcgtttgtctcatattctgg
ctaattttcagcatcatgggagtaaatctgtttgctgggaagttctactactgtgttaac
accacaactgataaaaggtttgaagtcgacagaatcaacaattttagtcagtgcgaggaa
ctcataaaaaacaatgaaactgcccgatggaaaaacgtgaaagtaaactttgataatgta
ggatttgggtatctttctttacttcaagtagctacatttaaaggatggatggatattatg
tatgcagctattgattcaagagctgtgcaggatcaacctaaatatgaagacaacctatac
atgtatctttattttgtcatctttatcatttttggatctttttttaccctgaatttgttc
attggtgttatcattgataacttcaaccagcaaaaaaagaagtttggaggtcaagatatc
tttatgacagaagaacagaagaaatactacaatgcaatgaaaaagctaggatccaagaaa
ccacaaaaacctatacctaggccagggaacaaattccaaggcatggtatttgattttgtg
acaaaacaagtatttgatattggcatcatgattcttatctgccttaacatggtcaccatg
atggtagaaacagatgatcagagtgatgagatgcaaactattttacagcggattaacctg
gtgtttattgtcctgttcactggagaatgtgttctgaaactgatttcactccgttattac
tacttcaccataggctggaacatttttgattttgtggttgtcattctctccatagtaggt
atgtttctagcaaaggtcatcgaaaaatattttgtgtcccccaccttgttcagagttatc
cgacttgccagaataggtcgaatcctgcgtctcattaagggagctaaagggattcgcact
ctgctttttgctttgatgatgtctcttcctgctttgtttaacattggtctcctgcttttc
ctggtcatgtttatctatgctatatttggaatgtccaactttgcctacgttaagagggaa
gctgggattgatgacatgttcaactttgaaacttttggcaacagcatgatctgcctattt
caaattaccacatctgctggttgggatggcttgttagcaccaattcttaacagtggagaa
ccagactgtgatcctaataaacctcacccgggaagctctgttaaaggagactgtggtaac
ccttcagttgggattttcttttttgtcagctatattatcatctcatttctagttgtagta
aacatgtatattgctgttattttggagaacttcagtgttgctacagaagaaagtgccgag
cccttgagtgaggacgactttgagatgttctatgaggtttgggaaaaatatgatccagat
gccacccagttcatggaatttgagaaactgtctgattttgcagctgcacttgatcctcct
cttcatttagcaaaaccaaacaaagttcagcttattgcaatggatctgcccatggtgagt
ggtgacagaattcactgccttgacatcttgtttgcttttacaaagcgtgttttgggggaa
agtggagagatggatgcacttcgaatacaaatggaagaccggtttatggcatccaatcct
tcaaaagcctcctatgaaccaattacaaccacattaaaacgaaaacaagaggaggcatct
gctgtcattattcagcgtgctttcagacgttaccttttaaaacgaacagtaaaacaggct
tcatttgcatacaacaaaaataaaatccaaggaggggttggtcaatgtatcaaagatgaa
attcttattgacaagttaaatgaaaattcatttacagagaaaacagacatgaccacctca
acagcagtttgtccaccttcctatgattgtgtaacgaagctagtaaaagaaaaacatgaa
aaggaagacaaagatgttagaaagaaggaaaaataa
DBGET
integrated database retrieval system
