KEGG   Chelonia mydas (green sea turtle): 102938251
Entry
102938251         CDS       T02989                                 
Symbol
BCAS2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102938251 (BCAS2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmy03041]
    102938251 (BCAS2)
   03400 DNA repair and recombination proteins [BR:cmy03400]
    102938251 (BCAS2)
Spliceosome [BR:cmy03041]
 Complex B
  Other components
   Prp19 complex
    102938251 (BCAS2)
 Complex C
   Prp19-CDC5 complex
    102938251 (BCAS2)
DNA repair and recombination proteins [BR:cmy03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    102938251 (BCAS2)
SSDB
Motif
Pfam: BCAS2 THOC7 YhjD SCRG1 INO80F ZapB_rel NOCA1_mid OmpH Tup_N
Other DBs
NCBI-GeneID: 102938251
NCBI-ProteinID: XP_037741324
LinkDB
Position
21:964649..973269
AA seq 229 aa
MSGPGPGPGLVAGEVAVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLPTP
DYSAFETEIMRNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEH
QAVRIENLELMSQHGCNAWKVYNEHLVHMIEQAQKELQKLRKNIQDLNWQRKNMQLTAGS
KLREMESTWVSLVSKNYEIERTIVQLENEILQIKQQHGEANKENIEQDF
NT seq 690 nt   +upstreamnt  +downstreamnt
atgtcggggccggggccggggccggggttggtggccggggaggtagcggtagatgcgcta
ccctacttcgaccagggctacgaggcgccgggcgtacgggaggcggctgcggccctggtg
gaggaggagacgcgacgctaccggcccactaagaattacctcagctacctgcccacacct
gactacagtgcctttgagacggaaattatgcggaatgagtttgagcgcctggcagctcgg
cagcccatagagctcctcagcatgaaacggtatgagctgcctgctccctcctctggtcag
aagaatgatatcacagcatggcaagaatgtgttaataactcaatggctcagctggagcat
caggctgttcggattgagaatctggagttaatgtctcagcatggctgcaatgcctggaaa
gtgtataacgaacacctggttcatatgatcgaacaagctcagaaagaactacagaaattg
aggaaaaacattcaagatctcaactggcagcgaaagaacatgcagctcacagctgggtct
aagttacgagagatggagtcaacgtgggtgtctctggtcagtaaaaactatgagattgag
cgaacgattgtgcaactagaaaacgaaatcttacaaattaaacagcagcatggggaggcc
aacaaggagaacatcgagcaagacttctga

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