Chelonia mydas (green sea turtle): 102938312
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Entry
102938312 CDS
T02989
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter isoform X2
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
102938312 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmy02000
]
102938312 (SLC6A4)
Transporters [BR:
cmy02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
102938312 (SLC6A4)
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GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
DUF3439
MUCL1
Motif
Other DBs
NCBI-GeneID:
102938312
NCBI-ProteinID:
XP_007057739
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Position
17:complement(2630677..2674226)
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AA seq
669 aa
AA seq
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MEKSSSNENQPLTSKKELLDCTEGEDCKENGLLVKNPKSALQLVEDGNKVHPSQGDKGEA
GQISNGYSVVQNPAPCDGIADGEDVQCMAPAATTTTTTTTSTTCGVEAQPQLLEPEERET
WSKKMDFLLSVIGYAVDLGNIWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALGQ
YHRNGCISIWRKICPIFKGIGFTICIIALYIAFYYNTIMAWALYYLISSFTVELPWISCN
NAWNTGNCTNYFINASITWTPHSISPAEEFYTRHVLQVQRSKGLDDLGGISWQLTLCLLL
IFTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVVFYLKPDWQKLL
ATEVWVDAAAQIFFSLGPGFGVLLAFASYNKFHNNCYQDALVTSTVNCMTSFVSGFVIFT
VLGYMAEMRNEEVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLITLGLDSTFA
GLEGVITAVLDEFPHVWGKRREWFVLGLIITCFLGSLTTLTFGGAYVVKLFEEYATGPAV
LTVVFLESIAVAWFYGVNQFCSDMKEMLGFTPGWYWRLCWIAISPIFLLFIICSFISSPP
DLRLFDYNYPYWTTIVGYCIGTSSVICIPIYMAYRLIITPGTFKERILKSITPETATEIP
FGDIRMNAV
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtcatccagcaatgagaaccagcctctgacttctaagaaagagctcttggac
tgtacagaaggtgaagattgcaaagagaatggactcctggtcaagaaccctaaatccgct
ctgcagctggtggaggatgggaataaggtccaccccagccagggagataaaggggaagca
ggtcagatctcaaatggctactcagtggttcagaacccagctccttgcgatggaatagca
gatggggaagacgtccagtgcatggccccagcagccacaactaccaccaccaccaccact
tccaccacttgtggggtggaggctcaaccacagctgctggagccggaggaaagagagacc
tggagtaaaaaaatggactttcttctctctgtcatcggctatgcagtggatctgggcaac
atatggcgatttccctatatatgctaccaaaatggaggaggagcgtttctcatcccgtac
acgatcatggccatctttggaggcatccccctcttttacatggaactagctctgggacag
taccacaggaatgggtgtatctcaatttggaggaaaatttgtcctattttcaaaggaatt
ggctttactatctgcataatagctctctacatagccttttactacaataccatcatggct
tgggccctctactacctcatttcatccttcacggtggagctgccatggatcagctgcaac
aatgcttggaacaccggcaactgcacaaactacttcatcaatgccagcattacctggacc
ccacactccatctcccctgcagaagaattttatacccgccatgttctacaggtgcaaaga
tccaaagggctggatgatctgggaggcattagctggcaattgaccctctgcttattgttg
attttcactattgtgtacttcagcatctggaaaggggtcaaaacatctggcaaggtggtg
tgggtgactgccacgttcccttacatcatactctttatcctgttagtacgaggggccaca
ttgcctggagcctggaggggggttgtcttctacctgaagcctgactggcagaaactcctg
gccactgaggtctgggtggacgctgcagctcagattttcttctctctaggtccaggtttt
ggggtcctactagcttttgccagctacaacaaattccacaacaactgctaccaggatgca
ctggttaccagtactgtgaactgcatgactagttttgtgtctggatttgtcattttcact
gtgcttggatatatggctgaaatgaggaatgaagaggtgtcggaggttgctaaagatact
gggcccagccttctcttcattacctacgcagaggccattgcaaacatgcccgcttcgacc
ttttttgccatcatatttttcttgatgttaatcactctgggattagacagcacgtttgca
ggactggagggggtgatcactgcagtgctggatgaatttccacacgtctggggcaagcgc
agggaatggtttgtccttggtctgatcattacttgcttcctggggtcattaacaactctg
acatttggtggtgcatacgtagtgaagctgtttgaagaatatgctacaggccctgctgtc
ctaacagtggtgtttctggaatccattgcggtggcctggttctatggcgtcaaccagttt
tgcagtgacatgaaggaaatgctgggcttcactccaggctggtactggcgactctgctgg
atagcaatcagccccatctttcttttgttcatcatttgcagttttatatccagccctcct
gatctacggctttttgattataactatccctattggaccactatagtgggttactgcata
ggaacctcctctgttatctgcattccaatctacatggcttatcggttgataatcacccca
ggaacatttaaagagcgtattctaaaaagcattaccccggagacagccacagaaattccc
tttggggacatccgcatgaatgcagtttaa
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