Chelonia mydas (green sea turtle): 102938358
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Entry
102938358 CDS
T02989
Symbol
PDZD2
Name
(RefSeq) PDZ domain-containing protein 2 isoform X4
KO
K24058
PDZ domain-containing protein 2
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cmy04990
]
102938358 (PDZD2)
Domain-containing proteins not elsewhere classified [BR:
cmy04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
102938358 (PDZD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
102938358
NCBI-ProteinID:
XP_027687354
LinkDB
All DBs
Position
5:complement(22112554..22424075)
Genome browser
AA seq
2542 aa
AA seq
DB search
MFRRIKRKAPLPPSNGNNSNSCEPKAKPASERSDRAAQNGKRTRKFGVIARTPASKDSKE
SKDSQNSEQENGRHTPMEVDSSQPEASNTEDRFRNADSEGRYRSRRSDGGVPDLNPSDLP
SQREGCHIWKMHMVKGTDGLGIQITGGRGSKRSPHGIIVAHVEEGGSAHRDGRLTAGDEL
LMINGQSLVGLSHQEAVAILRSATGLVELVVASREGTEEESLKYPSTSLPDLLSTCSVQD
TASCTDNKENEEPEDEDAKGVSMSPEAQVAMTETDKSPDPANVEVTKGNCQSPTLGGGIL
KYRSRSQGAGSRLESVGENDELTVENGESNYEIAVKYSRGGRKHSLPQQLESSGTRQEYH
IVKKSTRSLSAAQVESPWRLAQPSIISNIVLMKGQGKGLGFSIVGGQDSARGRMGIFVKT
IFPNGAAAADGRLKEGDEILEVNGESLQGLTHQEAIQTFKQLKKGVVTLTVRTRLRSPSL
TPCPTPTLMSRSSSPSSSASGGTPAPGSEDGDTFSSCRKGPGPKDRIIMDVTLNKEPGVG
LGIGACCLTLENSSPGIYIHSLAPGSVAKMDGRLSRGDQILEADSVSLRHAALSEAYAIL
SECGPGPVSLIISRHPNPKVSEQEMDEAIACTTHRESKDAYPPHVTGILQKSPSPSVKAK
QGEASSPLSWTMKRFLEPASRQGSVSSETELSQYFSQDGPSQVSFSDTQVTVSSDEEQLR
QKSGNSSLDDSSLPPSNLTAKEAGTTKVDSLASPTSGKSPGLFNKHVESARQGSLNGSPK
SVRSPLLRQRRVVFYDDDVSDEDDFVKQEEVDFQRSQRDKSQKNAKEDSGMVITTSFVEV
DDECQDGELSRHPGRKAATPVFSNSSVTEESALEQMADLSFFQIKALDYSGMPEIHPTNL
GVKELREAQLESMRSPKLEHKAVTRVKSMMSTECRNLPRQKMEEHGSCHKPVARTLPHSK
KTEGPDIPRQSNAETVNLLRNEDESFGLDLEIQATPVRVVITGLQSGGAAERGSMGKLTV
GDEILSINSTPVSGMTSQEICLFIQNLPRSVTLEVQKAVSAVDRLTNLLMSSGTDGSDQA
DPCSILVAEEETSSGRCEEKTLRNENPDNVTKRTMLPPDAKTEEVQAGFSEVSCAKDCAV
SPITDIDDFISKLNSSEDRTLQSLLTVASPRDEYTAECSCETEEGCSTNSEPDITKQELS
EKTVNYAANAQGILGLSVLDSINTGKLFTVNKSCLNNYSRNFSSLSVDDLPAADSVEDTR
NEPFPKSMYGAAEDSPSDTESLTEAPDSTGDSLLLPSADGKSSETCNVTESDEEQIEICC
MTNEPHQPIQENQQLTSARSVFHHSPPSSHTAEVLQTESGAVYSSLDTNNDKAPFILEDQ
CNSILPTPQHLNTVPATPLHSFPSVSLPDKETLNPPLALHPVCSFHNNGALSTEDRMGLE
NNEKSVKPCESSKDNMALQSKNMSFCTTGKVNGLESNLLDKEQHDKEQISNFASELVANE
CNHKVSYHSALTKKETNSLANFNKTDSNRVDSLSQRSTLTSRSPTPTKSKDLSKAGTTQD
LSGKNEKVNGGPLGRSSNAKIQSSSTSYSKGVTIQHSPTSQKKSHHEIKAMAQRTIVETL
LNSQRAKTGPKLKGLTIKSKTKANSEAPSFNPAKASGTDQRRTSVSPQLSPKLLGKKVSV
SRNVPTNVEPGKSTPPVSKTLKSEQENKPSLAVLEETSPSLLNGSSSSVENNEKQSRGNS
ELSVAGETEHQREGEKQKERLASVQQHVCNEKGVKMHVGDFKAREDPTKVTTSPKQTLKG
EYVKKRAENHGAGINLINSSYSEDDIQQLGAQNLEVCNNHSSSLSSPPIQQEQPEGQEIQ
RTFIEVRLSSSCSSLAPSSEQLLLEKAEATNTKVSQLTEEIGDGQYFTQVDTVGDGNRHS
ASKTVTRTYSMPAQLSSHLRKDSNVIDVSAHPMQGVQNNVSGMLKIVHLRVLNGQGTQDG
KEEIHTPQSVQKPSLEQLSLANENSCPATDKLKTFKRNYYYYELNWPQESTSSFSVKQRI
KSFENLANFDRPVVKAIDIHSTSMSSKPYVGRRSSSGISSISTTSTNDAVQTLRRSLSSC
SDSQSPTYPQKSQTNVILAHVQQNSADSSKDDIHLKKSKGEDTSGDLHVSSPTTPHIRRS
RGYGRHSLSRMKLRELRALSMPNLDKLCNEDFSVEPEATHFKTELEITPRKSLGLPVENV
SNLNASSALSNLAKMNRLCSKGSSPWNSGLGTPGSASDDDVPHDSSPARKPSEKSWSISL
DQLLVSTLDQQKLQSVLSSVKAKCDIITVLQEVKEQAESKEEAYFVVLNKEEGAGLGFSV
AGGIDLEQKSIIVHRVFSKGVASQEGTIHCGDLILSINGMSLAGSVHGDVLNAVHQARLH
KYAVIVIEKKKDREKISSRLEISATGRKHFVPGKDVTMEIGTGPIVDMSDVVSVELWKTS
AGLGFSLDGGKASISGDRPLLVKRIFKGGAAEQAGKIEAGDEIVAISGKSLLGLMHYDAW
NIIKSVPEGPVQLLIRKHRTSV
NT seq
7629 nt
NT seq
+upstream
nt +downstream
nt
atgttccgtcgcattaagcgcaaagcccctcttcctccatcaaatggcaacaacagcaac
agctgtgaacccaaagcaaagcctgcctcggagcgaagtgacagagccgctcaaaatggg
aaaagaactagaaagtttggggtcattgccagaactccagccagtaaggacagcaaggaa
agcaaagacagccagaattcagagcaggagaatggacgccacacacctatggaggttgac
agctcacagccagaggcaagcaacacagaggatcggtttcgaaatgcagactctgaggga
cggtacaggtctcgccgttcagatggtggggtgccagaccttaatccaagtgacctgcct
tcacagcgagaaggatgccacatctggaagatgcacatggtgaaggggacagacgggctg
gggatccagattacaggaggaagaggatcaaagcgatcccctcatggcatcattgttgcg
catgttgaggaaggaggctctgctcatagggatggtaggttgacagctggtgacgagctc
ctaatgatcaatggtcagtctttggttggactctcccatcaggaagctgtggctattctg
cgatctgctacaggtctagtcgagctggtggtagctagcagggaagggactgaagaggag
tctctcaagtatccatctacaagtttgcctgacttacttagtacctgttcagtccaagat
actgcctcttgcactgataacaaagagaatgaagagccagaggacgaagatgccaaagga
gtgagcatgtctcctgaagctcaggttgctatgacagaaaccgataagtctccagatcct
gctaatgtggaagtgaccaaagggaattgccaaagtccgaccctgggaggtggtatattg
aaatacagaagccgatcccaaggggctggatcccgtttagaatctgtgggagaaaatgat
gaactgaccgtggagaatggtgaatcaaattatgaaatagcagtgaaatattcccgggga
gggagaaaacattctcttccccagcagcttgaatcctcaggaacaaggcaggaataccat
attgtgaagaaatccacccgctcactgagtgcagctcaggtggaatctccatggagactg
gcccagccgtccattatttccaacattgtcctgatgaaaggacaaggcaagggtcttgga
ttcagcattgtgggaggccaggattctgctcggggacgcatggggatttttgtgaagact
atcttcccaaatggagcagctgctgctgatggaagacttaaagaaggggatgaaattcta
gaagttaatggagaatctttacaagggctgacccatcaggaggccattcagacgtttaag
caactcaagaaaggtgtagtgaccctcacagtgcgcacgagactgcgcagcccgagcctc
accccatgtccaactcccactttaatgagcagatcaagctccccaagctccagtgcgagt
ggaggaactcctgcacctggctctgaagacggagacactttctcctcgtgtcgcaaaggc
ccaggaccaaaggacaggatcatcatggatgtgacgctcaacaaagagccaggggttggg
ttaggcattggtgcctgttgtctcacactggaaaatagctctccagggatatacattcac
agcttggccccaggatcggtggctaaaatggatggtagattaagccggggtgaccagatc
ctggaggcagattcagtgagtctgcgccatgcagcactaagtgaagcctatgccattctg
agtgaatgtggtccgggtccagttagccttatcattagtcgtcatcccaatcccaaggtt
tctgaacaggagatggatgaagcaatagcgtgcaccactcatcgagagagcaaggatgcc
tatccccctcatgtcacagggattcttcagaaaagtccatcccctagtgtgaaagccaaa
caaggagaggcctcatcgcccctgagctggacaatgaaacgattcctggagccagcaagt
cggcagggatctgtcagttctgaaactgagctttcccagtacttctcacaagatgggcca
agtcaggtgtcattttctgacacacaagtaacggtctccagtgatgaagagcagctccgt
caaaaaagtggaaacagctctttggatgacagctctcttcctcccagcaatctaactgct
aaagaagcaggaacaaccaaagtcgacagtcttgcttcaccaaccagtggaaagtcacct
ggtcttttcaacaagcacgtggaatctgcccgacaggggagccttaatggtagtcccaag
tctgtccgcagcccactgctgaggcagagaagagttgttttctatgatgacgatgttagc
gacgaggatgattttgtcaagcaagaagaggtcgacttccaaaggagccagagggacaag
agccagaaaaatgccaaggaagactctggcatggtcatcacaacctctttcgttgaagtt
gatgatgaatgccaggatggtgaattgtctcgacaccctggccgtaaggcagctacccct
gtgttcagcaactcctcggtgactgaggagagtgccctggagcaaatggcggatttgtcc
ttctttcaaatcaaagcacttgattactcaggtatgcctgagattcatcctactaatctg
ggagtgaaggagctccgagaggcacagcttgaatctatgagatcccctaaactggagcac
aaagccgttacaagagtaaaaagcatgatgagcactgagtgccgcaatctcccaaggcag
aagatggaggagcatggttcctgtcataagcctgttgccaggacacttccacacagtaaa
aagactgaaggacccgacatccccaggcagagcaatgctgaaacagttaatctgctgcgg
aatgaagatgaatcatttggcctggatttggagatccaggccactcccgtaagagttgtg
ataacaggtttacaatcaggcggagcagctgaaaggggatctatgggaaagctgacagta
ggagatgagattttatccatcaacagtaccccagtcagtggaatgacatcccaggaaata
tgtctgttcatacagaatctccccaggtctgtaacactagaggtgcaaaaggcagtatca
gctgtggacagacttacaaacctcctcatgtcttccgggacggatggttcagatcaggct
gacccctgcagcatccttgtagctgaagaagaaaccagttctgggagatgtgaagaaaag
actttgcgaaacgaaaatccagacaatgtcacaaagagaacaatgctgccacctgatgcc
aagaccgaagaggtgcaagcaggtttctcagaggtcagctgtgccaaggactgtgctgtg
agcccaatcactgatattgatgacttcatcagcaaattgaattcttcagaggatagaact
ttgcagtctctactgacagtagcaagccccagagatgagtacactgccgagtgcagttgt
gagacagaggaaggttgttctactaattctgagccagatataacaaagcaggagctatct
gaaaaaactgtgaattatgcagctaatgcacaggggattttggggttatcagtactggat
tccattaatacaggcaaacttttcactgtgaataaaagctgcttaaataactattctagg
aattttagcagtttaagtgtagatgatttgcctgcagcagactctgtggaagatacaaga
aatgaaccatttccaaaatcaatgtatggcgctgcggaggattccccttcagacacagaa
tctctcaccgaagccccagattctactggtgacagtttgctcttgccatccgctgatggt
aaatcctctgaaacctgcaatgttacagagtcagatgaggagcaaattgaaatttgctgc
atgactaatgagccacatcagcccattcaggagaatcagcagctcacgtctgctagaagc
gtatttcatcattccccaccatcctctcacacggcagaagttttacaaacagagagcggt
gcggtatatagttcactggatacaaacaatgacaaagctccatttatactggaagatcaa
tgtaattcaattctacccaccccacagcatttaaatactgttccagccactcccttacat
tctttcccctcagtttctctaccagataaagagaccctcaaccctccattggctcttcat
ccagtttgctccttccataacaacggtgccttaagtacagaagacagaatgggcttggag
aacaatgaaaaatctgtgaaaccgtgtgagtcttccaaagataatatggctttgcaaagc
aaaaatatgagtttctgcactactggtaaggtgaatggcttggaaagcaatttgctggac
aaagaacaacatgataaagaacaaatatccaattttgcaagtgaactggtggctaatgag
tgcaatcacaaggttagttatcattctgctttgacaaagaaggaaacaaacagtttggct
aattttaataaaactgatagtaatcgggtagactctttatcacaaagatcaacactcact
tccaggtcacccactcctactaaatcaaaagatctaagtaaggctggtacgacccaggac
ttgtcagggaaaaatgaaaaagttaatggtgggccattgggaagaagttctaatgcaaaa
atccaaagttccagcacaagctacagcaaaggagttacaatacagcacagcccaacctca
cagaaaaaatcgcatcatgaaattaaggcaatggcccaaaggactattgtggaaacactt
ttaaatagtcagagagccaaaacaggaccaaagctaaagggccttactatcaaaagtaaa
acaaaggcaaattcagaagctccgagctttaatcctgcaaaagctagtgggactgatcag
agaagaacttctgtttctccacagttatcacccaagcttctaggaaagaaagtctctgtg
tcccgtaacgtacctacaaacgtggaacctggcaagagcaccccaccagtctctaagact
cttaaatccgagcaagaaaataaaccatctctagctgtgcttgaagaaacatcaccatct
ctgttgaatggcagcagcagctcagtggaaaacaatgaaaagcaatccaggggcaatagt
gagctaagcgttgctggggaaacggagcatcagagagaaggtgaaaaacaaaaagaaagg
ctggcttcagtgcagcagcatgtgtgtaatgagaagggagttaagatgcatgttggtgat
ttcaaagctagggaagatccgaccaaagtaactacctctcctaagcagacgctgaaaggt
gagtatgtgaaaaagagagctgaaaaccatggcgcaggcataaacctgataaacagcagt
tacagtgaagatgatattcagcaattaggtgctcaaaacctagaagtctgtaacaatcac
tcctcctcactgagttctcccccaattcagcaggagcagccagaaggccaggaaatccaa
cgcacattcattgaggtgaggttatcctcctcctgttcctccctagcaccatcatcagag
cagctgttgctggaaaaggcagaagctaccaatacaaaggtcagccagttaactgaggag
ataggggatggccagtatttcactcaagtagataccgttggggatggaaatcgacacagt
gcatccaaaaccgtgacgaggacttactcaatgccagcccagttgtcgagtcatttgaga
aaggacagtaatgttatagatgtttcagcacaccccatgcaaggtgttcagaacaatgtt
tcagggatgctaaaaattgtccatctcagggtgctgaatggccagggcacccaggatgga
aaagaggaaatacacactccccaaagtgtccagaaaccaagcctggagcagctctcttta
gctaatgaaaatagctgccctgccacagataaactaaaaactttcaagagaaattattat
tattatgaactgaactggccacaagaatctacctcatctttctctgtgaaacagaggatc
aaatcttttgagaatctggcaaatttcgatagaccagttgttaaagctatagacatacat
tcaacctccatgagttctaaaccatacgttggtagacgatcatctagtgggatatcctcc
ataagcactaccagcacaaatgatgcagtgcagacattgaggcgaagtttgagttcatgt
agcgacagtcaaagtccaacatatcctcagaaatcgcaaacaaatgtaatcttagcacat
gtacagcagaattcagcagacagcagcaaagatgacattcatttaaagaaaagcaaggga
gaagacacttcaggagatctgcatgtctcatcacccaccacacctcacatccgaagaagc
aggggttacggcaggcattcgctgtcccgcatgaagctccgagagctcagagcattgagc
atgccaaatcttgacaagttgtgcaatgaggacttctcagtggaacccgaggccacccat
ttcaaaacagaactggaaattacacccaggaaatcactcggcctgcctgttgaaaatgtt
tcaaatctgaatgcatcgtctgccctctccaaccttgcaaaaatgaatcggctatgttct
aaagggagtagtccttggaatagtggcttggggactcctgggtcagcatctgacgatgat
gtaccacatgacagctccccagctaggaagccatcagaaaaaagctggtcaatcagcttg
gaccagctattagtctcaaccctggaccagcagaaattgcaatctgttttatcatcagta
aaggcaaaatgtgatatcatcactgtgctccaagaagtcaaagaacaggcagagagcaaa
gaagaggcttactttgtggtcttgaataaagaagaaggtgctggcctgggatttagtgtc
gctggagggatagatctggagcagaaatctatcatagtccacagggtgttttcaaagggt
gtggcgtctcaagaaggaactatccattgtggagatctcattctgtcaattaatggcatg
tctctggcgggttcagtccatggagatgttctgaatgctgtgcatcaggcaagactgcac
aaatatgcagtcattgtcatcgagaaaaagaaagaccgagaaaagatttcatccagactt
gaaatatcagctaccggcagaaaacactttgtgcctggaaaggatgttaccatggaaata
ggaacaggtccaattgtggatatgagtgatgtcgtttctgttgaactgtggaaaacctct
gctggcttagggttcagccttgatggtggaaaagcttcaatttctggagacagacctttg
cttgtaaaaagaatatttaaaggtggcgctgcagaacaagctggaaaaatagaagctgga
gatgaaattgttgccattagtggaaaatcattacttggtctcatgcactatgatgcctgg
aacatcattaaatctgtcccagagggaccagttcagttgctgatcagaaagcacagaact
tcagtatga
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integrated database retrieval system
