Chelonia mydas (green sea turtle): 102938417
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Entry
102938417 CDS
T02989
Symbol
BCAN
Name
(RefSeq) brevican core protein isoform X2
KO
K06795
brevican
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cmy00535
]
102938417 (BCAN)
00536 Glycosaminoglycan binding proteins [BR:
cmy00536
]
102938417 (BCAN)
04091 Lectins [BR:
cmy04091
]
102938417 (BCAN)
Proteoglycans [BR:
cmy00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
102938417 (BCAN)
Glycosaminoglycan binding proteins [BR:
cmy00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
102938417 (BCAN)
Lectins [BR:
cmy04091
]
C-Type lectins
Lecticans
102938417 (BCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
hEGF
EGF_TEN
Izumo-Ig
EGF_3
Motif
Other DBs
NCBI-GeneID:
102938417
NCBI-ProteinID:
XP_027682830
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All DBs
Position
24:4417175..4469357
Genome browser
AA seq
1170 aa
AA seq
DB search
MMNMMLLLWVFSRLAFTDAFISGDSADDLKALRVSIAKHPPVRAVLAGTLTIPCHVTYLR
PLATSSTAGRRAVLGAPRVKWTFISEGKEAEILVARGQKVKVSEGYRYRVSLPFYPATPT
DATLVMSELRSNDSGIYRCNLQHGIEDGHDLLEVKVKGVVFLYREGSTRYAFTFAKAREA
CARIGAQIATPEQLYAAYFSGYEQCDAGWIADQTVRYPIHTPREACYGDMDGLPGVRNYG
AVDPEDMYDVYCYVEDLHGELVLGTAPDKFTLEEAKAHCQDLGAEIATPGQLYAAWNEGL
DHCSSGWLADGSVRYPIVTPRERCGGSQPGVKTVFQFRNQTGFPDAQSRYDVYCFREETD
SFTESPEKYRATEPEGVKEIVTVTDKMEELQLPRAEVENESRGAIYAVPLFQDMSDAEQQ
KPSSAPEEASIPISREALLDNSVSSDLGLHLPSRFPESPASPEAGLISSDVKPGSPAPPA
EEGEKGRIGNCTETPRNEEEHGTDPKQTLSSSLEGENVRTAEEKQTPGSSHQGSDGVNLV
LPTEMTPGEPQSMVPHAEVEMTGGDMTASPTNAPAEISPKLAGSGDAIKPNMSHVPVSSH
QERREEPTAEGSSADGLGVDFIPGSSLDLEVVATKKADALEQLARTTSSRGIKEDSGMQE
HSPTVAASAAPTAGWKAEDLKEPGQRLFTERAQTYATPPSGLVSGMSSTGFPDPGRRPGA
SEDTELSGDVALGPVWPEGTSMIQDTPLSASPGTGTSGLQENEEHSGSTWLLQPAAPRSQ
TEDIRSASRPEGTMFALTISHTEVGQVHTVLPPSGEPPAEDDSQTVGRKRVEPPDSDASG
PLSGESSEEEKAIEEQTVPSATPAMAAISPTGTPGEPEGDGCSSTAKHGLTSPTADVFKE
ASGPALEGIPFTDAPLTTTSPLPVLPTDSASLGAGVNISDDCIPNPCMNGGTCSEEEYRI
SCICLPGYGGDICETDLEKCSPGWDSFQGSCYKHFATRRSWEDAETQCRRYGGHLANIMT
PEEQNFINNQYKEYQWIGLNDRTIEGDFQWSDGSPVLYENWHHGQPDSHFLSGEDCVVIV
WHNGGQWSDVPCNYHLSYTCKMGLVSCTSPPEITNAHRFGKPKQRYEINSIVLYQCLDGF
TQRHSPVVRCQEDGRWEWPQLSCIPIGPNP
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacatgatgctgctgctttgggtattttcccgccttgcttttacagacgcattt
atctctggggacagtgcagatgacctcaaggctctgagggtctccattgccaaacacccg
ccagtccgggcagtgctggcaggcaccctcaccattccgtgccacgtcacctacctgcgt
cccctggccacctctagtacagcggggcgccgggcggtgttgggggcgccccgggtcaaa
tggaccttcatctctgaggggaaggaggctgagatcctggtggcccgggggcagaaggtg
aaggtgagcgaaggctaccgctaccgcgtctccttgcccttctacccggccacgcccact
gacgccactttggtgatgagcgagctccggtccaatgactccgggatctaccgctgtaat
ttgcagcacggcatcgaggacgggcatgacctgctggaggtgaaggtcaaaggggtggtg
ttcctttatcgggagggctccacgcgctacgccttcacctttgccaaggctcgggaggcc
tgcgccaggataggggcacagatcgccacccccgaacagctgtacgccgcctatttcagt
ggctacgagcaatgcgacgcgggctggatcgcagaccagacggtcaggtacccaatccac
acccctcgtgaggcctgttatggagacatggatggattgccaggggtccgtaactatgga
gcagtggacccagaagacatgtacgatgtatactgttacgttgaagatctgcacggagaa
ctcgttttggggaccgccccagacaaattcaccctggaggaggccaaggctcactgtcag
gatctgggagcggagatagcgacgccgggccagctgtacgcggcctggaacgaagggctg
gaccactgcagctcgggctggctggctgacggcagcgtccgctaccccattgtcaccccg
cgggaacggtgcggagggagccagccgggagtcaaaaccgtcttccagttccggaaccag
actggattccccgatgcccagagcagatacgacgtgtactgctttcgagaagagacagac
tctttcacggagtctccagaaaaataccgagccactgagcccgagggggtcaaggagatt
gttacagtgacagacaagatggaggagctgcagctgcccagagcggaagtggagaatgag
tcgagaggggctatatacgccgtccctctttttcaggacatgagtgacgctgagcagcaa
aagccaagcagtgcccccgaagaggcatcaattcctatctcccgggaagccctgctagat
aactccgtatcctcagatctaggacttcacctgccatcacgtttccccgagagcccagcc
agtcccgaggcaggtctgattagcagcgatgtaaaaccagggagccctgcccctccagct
gaggaaggggaaaaggggagaattggaaattgcacagagacacccaggaatgaggaagaa
catggaactgacccgaaacaaaccttgagttcttcgttggagggagagaacgtgaggact
gctgaagagaagcagactccaggcagcagccaccagggatcagatggggtgaatctagtt
cttcccactgagatgactccaggagagccccagtccatggtcccccacgcagaggtagaa
atgactggtggagacatgaccgccagccctacaaatgcgccagcggaaatctcaccgaaa
ctagctggatccggtgatgcaatcaaacccaatatgtctcacgtccctgtcagttcccac
caagaacgcagagaggagcccacagcagaaggcagctctgctgatggcttaggggtggat
ttcatccctggttcatccctggacctagaggtcgttgccacgaagaaggcggatgctctg
gagcagctggctcgcaccaccagctccaggggcatcaaggaggactctgggatgcaagag
cactctcctaccgtcgctgcttctgctgccccaactgcggggtggaaggcagaagatctc
aaagaaccaggtcagcggctctttacggaacgtgcccagacctacgccacacctccaagt
gggcttgtttccgggatgagcagcacaggcttccctgacccgggcagacgcccgggtgct
tctgaagatacagagctgtctggagatgtggctcttggcccagtgtggccagaagggacc
tcaatgattcaggataccccactgtctgcatcccctggtacgggaacatccggcctccag
gagaacgaggagcactcgggttctacctggcttctgcagcccgccgccccccgctcccag
acggaggacatccgctctgcctcccgaccggaggggacgatgtttgccctcaccatttcg
cacaccgaagtaggccaggtccacaccgtgctgccacccagcggggagcctccagcagag
gacgacagccagacggtgggacgcaagagggtggagccgcccgactctgacgcgagcggc
ccgttgtcaggtgaatcatctgaggaggagaaggccattgaagagcaaactgttccctcc
gcgaccccggcaatggcggccatctcccccacgggtactcctggagaaccagaaggggac
ggatgctcatccaccgccaagcacggcctcacttcccccactgcagacgtcttcaaagaa
gcatcgggcccagcgttggaggggatccctttcacagacgcccctttgaccaccaccagc
cctctccccgtcctgccaacagacagcgccagcctgggagcaggggtgaacatttcagat
gactgcatcccaaacccttgtatgaatggagggacctgcagcgaagaagaataccgcatc
agctgtatatgtctgccaggctatggaggagacatctgtgaaacagatctggagaagtgc
agcccaggctgggacagcttccagggttcctgctataaacatttcgccacccgaaggagc
tgggaggatgcagaaactcagtgccggcgttatggtggccacctggccaacatcatgacc
cccgaagagcagaacttcatcaacaatcagtacaaggaatatcagtggatcggcttgaat
gatcgaaccatcgaaggagattttcagtggtccgatgggagccccgtgctgtatgagaac
tggcaccacgggcagcccgacagccatttcctgtccggagaagactgcgtggtcatagtg
tggcataacgggggacagtggagtgatgtgccttgcaactaccacctgtcctacacctgt
aaaatgggtctagtgtcttgtacctccccgcccgagataacaaacgcccaccgatttggc
aaaccaaagcagcgctatgagatcaactccattgtactgtaccaatgcctggacggcttc
acccagcgccactcacccgtggttcggtgccaggaggacggccggtgggagtggccgcag
ctcagctgcattccgattggaccaaacccttga
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