KEGG   Chelonia mydas (green sea turtle): 102938417
Entry
102938417         CDS       T02989                                 
Symbol
BCAN
Name
(RefSeq) brevican core protein isoform X2
  KO
K06795  brevican
Organism
cmy  Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:cmy00535]
    102938417 (BCAN)
   00536 Glycosaminoglycan binding proteins [BR:cmy00536]
    102938417 (BCAN)
   04091 Lectins [BR:cmy04091]
    102938417 (BCAN)
Proteoglycans [BR:cmy00535]
 Extracellular matrix (ECM) proteoglycans
  Aggrecan / versican family
   102938417 (BCAN)
Glycosaminoglycan binding proteins [BR:cmy00536]
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   102938417 (BCAN)
Lectins [BR:cmy04091]
 C-Type lectins
  Lecticans
   102938417 (BCAN)
SSDB
Motif
Pfam: Xlink Lectin_C Sushi V-set EGF hEGF EGF_TEN Izumo-Ig EGF_3
Other DBs
NCBI-GeneID: 102938417
NCBI-ProteinID: XP_027682830
LinkDB
Position
24:4417175..4469357
AA seq 1170 aa
MMNMMLLLWVFSRLAFTDAFISGDSADDLKALRVSIAKHPPVRAVLAGTLTIPCHVTYLR
PLATSSTAGRRAVLGAPRVKWTFISEGKEAEILVARGQKVKVSEGYRYRVSLPFYPATPT
DATLVMSELRSNDSGIYRCNLQHGIEDGHDLLEVKVKGVVFLYREGSTRYAFTFAKAREA
CARIGAQIATPEQLYAAYFSGYEQCDAGWIADQTVRYPIHTPREACYGDMDGLPGVRNYG
AVDPEDMYDVYCYVEDLHGELVLGTAPDKFTLEEAKAHCQDLGAEIATPGQLYAAWNEGL
DHCSSGWLADGSVRYPIVTPRERCGGSQPGVKTVFQFRNQTGFPDAQSRYDVYCFREETD
SFTESPEKYRATEPEGVKEIVTVTDKMEELQLPRAEVENESRGAIYAVPLFQDMSDAEQQ
KPSSAPEEASIPISREALLDNSVSSDLGLHLPSRFPESPASPEAGLISSDVKPGSPAPPA
EEGEKGRIGNCTETPRNEEEHGTDPKQTLSSSLEGENVRTAEEKQTPGSSHQGSDGVNLV
LPTEMTPGEPQSMVPHAEVEMTGGDMTASPTNAPAEISPKLAGSGDAIKPNMSHVPVSSH
QERREEPTAEGSSADGLGVDFIPGSSLDLEVVATKKADALEQLARTTSSRGIKEDSGMQE
HSPTVAASAAPTAGWKAEDLKEPGQRLFTERAQTYATPPSGLVSGMSSTGFPDPGRRPGA
SEDTELSGDVALGPVWPEGTSMIQDTPLSASPGTGTSGLQENEEHSGSTWLLQPAAPRSQ
TEDIRSASRPEGTMFALTISHTEVGQVHTVLPPSGEPPAEDDSQTVGRKRVEPPDSDASG
PLSGESSEEEKAIEEQTVPSATPAMAAISPTGTPGEPEGDGCSSTAKHGLTSPTADVFKE
ASGPALEGIPFTDAPLTTTSPLPVLPTDSASLGAGVNISDDCIPNPCMNGGTCSEEEYRI
SCICLPGYGGDICETDLEKCSPGWDSFQGSCYKHFATRRSWEDAETQCRRYGGHLANIMT
PEEQNFINNQYKEYQWIGLNDRTIEGDFQWSDGSPVLYENWHHGQPDSHFLSGEDCVVIV
WHNGGQWSDVPCNYHLSYTCKMGLVSCTSPPEITNAHRFGKPKQRYEINSIVLYQCLDGF
TQRHSPVVRCQEDGRWEWPQLSCIPIGPNP
NT seq 3513 nt   +upstreamnt  +downstreamnt
atgatgaacatgatgctgctgctttgggtattttcccgccttgcttttacagacgcattt
atctctggggacagtgcagatgacctcaaggctctgagggtctccattgccaaacacccg
ccagtccgggcagtgctggcaggcaccctcaccattccgtgccacgtcacctacctgcgt
cccctggccacctctagtacagcggggcgccgggcggtgttgggggcgccccgggtcaaa
tggaccttcatctctgaggggaaggaggctgagatcctggtggcccgggggcagaaggtg
aaggtgagcgaaggctaccgctaccgcgtctccttgcccttctacccggccacgcccact
gacgccactttggtgatgagcgagctccggtccaatgactccgggatctaccgctgtaat
ttgcagcacggcatcgaggacgggcatgacctgctggaggtgaaggtcaaaggggtggtg
ttcctttatcgggagggctccacgcgctacgccttcacctttgccaaggctcgggaggcc
tgcgccaggataggggcacagatcgccacccccgaacagctgtacgccgcctatttcagt
ggctacgagcaatgcgacgcgggctggatcgcagaccagacggtcaggtacccaatccac
acccctcgtgaggcctgttatggagacatggatggattgccaggggtccgtaactatgga
gcagtggacccagaagacatgtacgatgtatactgttacgttgaagatctgcacggagaa
ctcgttttggggaccgccccagacaaattcaccctggaggaggccaaggctcactgtcag
gatctgggagcggagatagcgacgccgggccagctgtacgcggcctggaacgaagggctg
gaccactgcagctcgggctggctggctgacggcagcgtccgctaccccattgtcaccccg
cgggaacggtgcggagggagccagccgggagtcaaaaccgtcttccagttccggaaccag
actggattccccgatgcccagagcagatacgacgtgtactgctttcgagaagagacagac
tctttcacggagtctccagaaaaataccgagccactgagcccgagggggtcaaggagatt
gttacagtgacagacaagatggaggagctgcagctgcccagagcggaagtggagaatgag
tcgagaggggctatatacgccgtccctctttttcaggacatgagtgacgctgagcagcaa
aagccaagcagtgcccccgaagaggcatcaattcctatctcccgggaagccctgctagat
aactccgtatcctcagatctaggacttcacctgccatcacgtttccccgagagcccagcc
agtcccgaggcaggtctgattagcagcgatgtaaaaccagggagccctgcccctccagct
gaggaaggggaaaaggggagaattggaaattgcacagagacacccaggaatgaggaagaa
catggaactgacccgaaacaaaccttgagttcttcgttggagggagagaacgtgaggact
gctgaagagaagcagactccaggcagcagccaccagggatcagatggggtgaatctagtt
cttcccactgagatgactccaggagagccccagtccatggtcccccacgcagaggtagaa
atgactggtggagacatgaccgccagccctacaaatgcgccagcggaaatctcaccgaaa
ctagctggatccggtgatgcaatcaaacccaatatgtctcacgtccctgtcagttcccac
caagaacgcagagaggagcccacagcagaaggcagctctgctgatggcttaggggtggat
ttcatccctggttcatccctggacctagaggtcgttgccacgaagaaggcggatgctctg
gagcagctggctcgcaccaccagctccaggggcatcaaggaggactctgggatgcaagag
cactctcctaccgtcgctgcttctgctgccccaactgcggggtggaaggcagaagatctc
aaagaaccaggtcagcggctctttacggaacgtgcccagacctacgccacacctccaagt
gggcttgtttccgggatgagcagcacaggcttccctgacccgggcagacgcccgggtgct
tctgaagatacagagctgtctggagatgtggctcttggcccagtgtggccagaagggacc
tcaatgattcaggataccccactgtctgcatcccctggtacgggaacatccggcctccag
gagaacgaggagcactcgggttctacctggcttctgcagcccgccgccccccgctcccag
acggaggacatccgctctgcctcccgaccggaggggacgatgtttgccctcaccatttcg
cacaccgaagtaggccaggtccacaccgtgctgccacccagcggggagcctccagcagag
gacgacagccagacggtgggacgcaagagggtggagccgcccgactctgacgcgagcggc
ccgttgtcaggtgaatcatctgaggaggagaaggccattgaagagcaaactgttccctcc
gcgaccccggcaatggcggccatctcccccacgggtactcctggagaaccagaaggggac
ggatgctcatccaccgccaagcacggcctcacttcccccactgcagacgtcttcaaagaa
gcatcgggcccagcgttggaggggatccctttcacagacgcccctttgaccaccaccagc
cctctccccgtcctgccaacagacagcgccagcctgggagcaggggtgaacatttcagat
gactgcatcccaaacccttgtatgaatggagggacctgcagcgaagaagaataccgcatc
agctgtatatgtctgccaggctatggaggagacatctgtgaaacagatctggagaagtgc
agcccaggctgggacagcttccagggttcctgctataaacatttcgccacccgaaggagc
tgggaggatgcagaaactcagtgccggcgttatggtggccacctggccaacatcatgacc
cccgaagagcagaacttcatcaacaatcagtacaaggaatatcagtggatcggcttgaat
gatcgaaccatcgaaggagattttcagtggtccgatgggagccccgtgctgtatgagaac
tggcaccacgggcagcccgacagccatttcctgtccggagaagactgcgtggtcatagtg
tggcataacgggggacagtggagtgatgtgccttgcaactaccacctgtcctacacctgt
aaaatgggtctagtgtcttgtacctccccgcccgagataacaaacgcccaccgatttggc
aaaccaaagcagcgctatgagatcaactccattgtactgtaccaatgcctggacggcttc
acccagcgccactcacccgtggttcggtgccaggaggacggccggtgggagtggccgcag
ctcagctgcattccgattggaccaaacccttga

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