Chelonia mydas (green sea turtle): 102938458
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Entry
102938458 CDS
T02989
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta isoform X5
KO
K17301
coatomer subunit beta
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmy04131
]
102938458 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmy04147
]
102938458 (COPB1)
Membrane trafficking [BR:
cmy04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
102938458 (COPB1)
Exosome [BR:
cmy04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
102938458 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
102938458
NCBI-ProteinID:
XP_037755677
LinkDB
All DBs
Position
6:34502202..34560347
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AA seq
954 aa
AA seq
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MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADV
LEFVREAIQRFDNLRLLIVEKMLEVFHAIKTVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGDLKPEEEVTVGPTQKLVTEMGTYATQSALSSSRPAKKEEDRP
PLRGFLLDGDFFVAASLATTLTKIALRYMALVQEKKKQNSFIAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEK
RNVTVQPDDPISFMQLTAKNEMNSKEDQFQLSLLAAMGTTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNIIDLNEYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIHLGPDAPVTGHIRIRAKSQDFQIQKNHLLDAIGRILKWF
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgcagagaatgtatgttatacgttgattaatgttccaatggattcagaacca
ccatctgaaatcagcttaaaaaatgacctagaaaaaggagatgtaaagtctaagacagag
gccttgaagaaagtaattatcatgatcctgaacggtgaaaaactacctggacttctgatg
actattattcgttttgtactgcctcttcaagatcataccatcaaaaaactgctgttagtc
ttttgggagatagttccgaagaccactccggatggcaaactgttgcaagaaatgatcctt
gtatgtgatgcctatagaaaggatcttcagcaccccaatgaatttatccggggttctact
cttcgttttctttgcaagctgaaagaagcagaattactggaacctttgatgccagctatt
cgtgcatgtttagaacatcgtcacagctatgtgcgcagaaatgcagtcctggcaatctac
acaatttacagaaactttgaacatcttatacctgatgctcctgaattgatccatgatttc
ctggtgaatgagaaagatgcaagctgcaaaagaaatgcatttatgatgctaattcatgca
gatcaggatcgagctttggattatttgagtacctgcattgaccaagtccagacatttggt
gacattcttcagctggttattgttgaactaatttacaaggtctgccacgctaatccatca
gaaagagctcgatttatacgctgtatttacaacttattgcaatcatctagtcctgcagta
aaatatgaagcagcaggaacactagttacactctccagtgcaccaacagcaatcaaggca
gcagctcagtgttacattgacttgattattaaagagagtgataacaatgtgaaactgatt
gtactggatcgcttgattgagctgaaagagcatcctgctcatgaacgagtgttacaagat
ctggttatggacatactgagagtgctgagtactccagatttagaagtgcgcaagaaaacc
cttcagttagctctggatcttgtatcttctagaaatgtggaagagctggtgattgttttg
aagaaagaagtgattaaaacaaacaatgtgacagagcatgaagatactgacaaatacagg
cagttgcttgttcggacactgcattcctgtagcgttcggtttccagatatggctgcaaat
gttattcctgtgttgatggagttcctaagtgataataatgaagctgcagctgctgatgtc
ttggaatttgtgcgtgaagcaattcagcggtttgataatctcagactacttattgttgag
aagatgctggaagtctttcatgccattaaaactgtcaagatttacaggggagctttgtgg
atccttggagaatattgcagcacaaaggaagatatacaaagtgtaatgacagaagtccgc
aggtcgctgggagagatcccaatagtggaatctgaaataaagaaagaagctggtgatctg
aaaccagaagaggaggtgactgtgggtccaacccaaaaattggtgacggagatgggcacc
tatgctacacagagtgccctcagtagttcccgacctgccaaaaaggaagaggatagacct
ccattacgaggatttttgctggatggggatttctttgttgctgcttcccttgccacaact
ttgactaagattgctctacgctatatggctcttgttcaggaaaagaagaaacaaaattct
tttattgctgaggctatgttgctaatggccactattctccatttgggtaagtcctctctt
cccaagaagccaattacggatgatgatgtggatcgtatctccctatgtctgaaggttttg
tcagagtgttctcctctaatgaatgatattttcaacaaggagtgcagacagtccctttct
catatgctgtcagctaaactagaagaggagaaactttctcagaagaaagagtcagagaag
aggaatgtgacagttcagccagatgaccccatttccttcatgcagcttactgctaaaaat
gaaatgaactcaaaggaagaccaatttcagctgagccttctggcagcaatggggaccacg
caaagaaaagaagctgctgatcccttggcatccaaactcaacaaggttactcagttgaca
ggtttctcagatcctgtctatgcagaagcatatgttcatgtcaaccagtatgatattgta
ttggatgtgcttgtagtaaaccagaccagtgatactttgcagaactgcacattagaacta
gccacactaggtgacttgaaattagtggagaaaccatctcctttgacgcttgctcctcat
gattttgcaaacattaaggctaatgtcaaagtagcctcaacagaaaatggtatcattttt
ggtaatattgtgtatgatgtatctggagcagccagtgacagaaactgtgttgtcctcagt
gatattcatattgacatcatggattacattcagcctgcttcttgtactgatgcagagttc
cgccagatgtgggcagaatttgaatgggaaaacaaagttacagttaatacaaacatcatt
gatctaaatgaatacttacagcacatactaaaatcaaccaacatgaaatgccttacccca
gagaaggcactttctggttactgtggctttatggctgccaatctgtatgcacgttccata
tttggagaagatgcacttgcaaatgtcagcattgaaaagccaattcatcttggaccagat
gctcccgtcactggccacatacgaattcgtgcaaagagtcaggactttcagattcaaaag
aaccatttacttgatgctattggaagaattttgaaatggttttaa
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