Chelonia mydas (green sea turtle): 102938574
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Entry
102938574 CDS
T02989
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmy03009
]
102938574 (UTP20)
Ribosome biogenesis [BR:
cmy03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
102938574 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
102938574
NCBI-ProteinID:
XP_037740101
LinkDB
All DBs
Position
1:complement(262194493..262278449)
Genome browser
AA seq
2800 aa
AA seq
DB search
MKPKSASHKSENTHRFLTFSERLGNVNIDIIHRIDRTGSYAEEVETYFYEGLQKWRELNL
TQHFVKFYKEVAGKCQSFNQLVYYQDAIVQSLKTHLQVKNSLAYQPLLDLVVQLARDLQT
DFYPHFQDFFLTITMLLDTQDTELLEWAFTTLSYLYKYLWRLMVKDMANIYSLYSTLLAH
NKQHIRNFAAESFTFLMRKVSDKNALFNVMFLDLGEHPEKVEGVGQLLFEMCKGVRNMFH
SCAEKAIKFILLKLGPITEIEAKLPWIIVGEAFKHMVKSAAVHIYKEHFEVLFKCLEESV
LELQERITKANCCEISEQMERILQVYLILAEHANGSKISQPEAVCKTLAKMLQTSDLSVP
CCKTLLKTLSVLLLADNVILPDAVTKETIEKVFGSGFERRLLLDFSKTVFSMNEFEQHFL
PCFLEYVEDCFSGEDVLARDEAMAILAKLILEKAEPPTVGSMAFEKYPLVFTEPPIGSNT
RQKMSKRNGERKQMPVLDHILSLIHLPENEDIIDLSHPWAALVVLPHVRPIDKEKMLLPV
TSFIESLFLAIDRGRLRKGGLYVACQAVSTLLSLAESSEILHLLPVERVKNLVSTFPSDP
SALLLADLYYTRLALCGCQDPLSHENLMDLFDKLKANISSSISKVRLLTIRILNHFEAQL
PTSTKEDGTGELQSVFAILLQAELVPASVNDYREKLLHLRKLRHDVVQSAVPDGPLHEVP
LQYLLGMLYINFSPLWDPVVELITSHANEMENKQFWKVYYEHLEKAAVYAERELQDELSE
EQAGAADAESEKIREGNVGSLYLEQLRFRTDCSERIDYANFRFLLWKALAKVPDRVEPRS
RELSPLLLRFISNEYYPADSLVAPTQDLRKKNSGVVEEEEKPTEEIHQATKEEEKEEVEG
MDEPVVEGLQKKKTRRAAAKQLIAHLQVFSKFSNPRALYLEPKLNELYNQLLSHQDQNVQ
KVALDCIMTYKHPHLLPYKENLQRLLEDKSFKEEIVHFSISEENTIVKMQHRPDLVLVLM
RILYGRMRNKTGSRTQGKSAAGTRMSIVLRFLAGSLPEEIRMFLDLLFEPVKHFSAGPCQ
VAVLQTISELDLSKVLPLGRQHSLFNSFEVVLKNMGHLITRYLPEILQILLCMTATVSHI
LQQREKIQLRFINPLKNLRRLGIKLVAEFFSDFETYSFTVDEIDAIFEAVIWPQISRLAS
ESQYSPTLLLKLIHIWSKNSRYFPLLAKQRPGHPEYDTLLNVFALLSTKNLCEATAGVVM
DVADNLLNSPDFEPTDLVSSLTVTDCVCLESDTDGMTEESPSLGARLILPHVPAVLQYLS
KTMLNVEKVKKKKFRAQVSKELNILSRISKFIQDKGQSSVLISLLLPFLHQSSIMQDTEI
DILVTVQNLLRHCLNPTSFLKPLAKLFSVIQNKLSRQTLCVVFQTLSDLEGELKYITEVV
KLNAFDQRHLDDINFDVRLSAFQGITSQVKEMQRVDINFLIPVMHNCFYTIQLGDMSLSD
SASLCLTSIIHRIAEISHTEDEYKEIIQHTLLLSLRKGLKSKTENIQQDYTSLLSCLIRT
FPKHPEFQDLVQLTDCHDPEMDFFENMKHIQIHRRARALKKLAKQLTEDKIVLSSKSLQN
YIMPYATTTIFDEKMLKHENMITASVEVVGAVCRHLSWSAYMYHLKHFIHVLQTGQMNQK
LAVSLLVTVLEAFHFDHETLEKQLETLQNEDAEAMDAEEAAENEAMELEQSEGEEEAEGD
KSKNLPEDSEKQGDPALIQHEQAGTGESEETQKATKSISSLPRNKEELECLIEHIQGTVT
GSILPKLHRCLAAKVKRDEEHKLVKSKAVNDEEVVRVPLAFAMVKVMQSLPQEVMEANLP
SILLKVCSLLRNRAQEIRDIARNTLTKIMEALGARYLQYVLREMQSILIHGYQVHVLTFT
VHLLLKGLTSRLSTGDLDTCLDIMIEIFNQELFGDVAEEKEVKGIVSKVMEARRSKSYDS
YEILAKYVGKDQVTKLILPLKEILESTMSLKMSRKVHETLRRIMSGLILNPEMSAESILV
LSHGLISENLPLLTEKARTKAPAPPDPRLQPESCLLLPPVPARGGQKAPVSSKTNMHILV
DSGLRLLHMSLKRSKINSSDEHVLEMLDPFVQLLIDCLQSTDVKVITGALQSLVWILKFP
LPSIEKNTEQLTKQLFLLLKDFAKPGAARGQNFHLVVNCFKCVTRLVRNTNSHITEKQLQ
VLLGYAEEDIYDSSRQATAFGLLKAILSRKLIVPEIDAVMQKVAKFAITGQSEPVRVQCR
QIYLKYILDYPLGDKLKPNLEFIFAQLNYDYETGRESALEMIAYLFEMFPQGLLHQYCGL
FFVPLCMMMVNDDSAKCKKMAAMANKSLLIKVDSANRDLMFSLVTMWFNSEKSSHKRLAT
QACGLFVEAEGVAFESQLGAVLPLIEKEIEPLKFEDITEETEEKAADRLLFSFLTLIIKL
IKECNIILLTKHNEILSNIWRHVQSHLWYPHSWVWLTAAQIFGLLFASHKPEELVSKWNE
RKAGKSKKTTVEPAATRFFTDELDKKMKELALAFCHQLQSKFLDQSLGEQVIKNLLFVAR
VLYLLVPDSEEGEETKDYEMGGQENASEDEGEKAASAQEEKEGEAEEKSRPATVLWVMKR
LSLMAKREAAYSPKNPVKRTCIFKFLGAVAVDLGKDRIKPYLPTIITPLHRELSSTYAEQ
DPTLKNLSQEIIELLKKLVGLETFSLAFASVQKQASQKRAIRKKQRALQTVANPEIAARK
KLKKHKNKIEARKRKIEFLRPGYKAKKPRSHALKDLAMVE
NT seq
8403 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccaaatccgcctcgcacaagtccgagaacacgcacaggtttctcaccttctct
gaacgcttaggcaatgttaatatcgatattattcatcggattgacaggactgggagctat
gctgaggaggttgaaacctacttttatgaaggactgcagaaatggagagaactgaacctc
acacagcactttgtgaaattctacaaagaagtggccggcaaatgccagtcattcaaccag
ctggtgtattatcaggatgccatagtgcagagcttgaagactcatctgcaagtcaaaaac
agtcttgcgtatcagccccttttggaccttgtggtacagctggctcgagatctccagaca
gacttctaccctcactttcaagacttttttctgaccatcaccatgttattggatacccaa
gacacagagctgctagaatgggcttttaccactctttcctacctttacaaatacctgtgg
agactgatggtgaaggatatggccaatatatatagtttatacagtaccttgttggcacac
aacaaacaacacatcagaaactttgctgcagaaagcttcacctttctaatgaggaaggtt
tctgataaaaatgcacttttcaatgtaatgtttcttgacctgggagagcacccagaaaaa
gtagaaggcgtgggacagttactctttgagatgtgcaagggggttaggaacatgtttcac
tcctgtgcagagaaggctataaagttcattctgctaaagcttggacccattaccgagatt
gaagctaaactcccatggattattgttggagaagctttcaaacatatggtaaaatcggct
gcagtgcatatctacaaggagcattttgaggttcttttcaaatgtttggaagaatcagtg
ttagaattgcaggagagaataacaaaggccaactgctgtgaaatctcagaacagatggaa
aggatattgcaagtgtatttgatcctagcagaacatgcaaatgggtccaaaatctctcaa
cctgaagcagtttgtaagacgttagcaaaaatgttacaaacatctgatctctcggtgcct
tgctgtaagaccctgcttaaaacgctttctgttttgctgcttgctgacaatgttatcctg
ccagatgctgtgaccaaggaaaccattgagaaggtatttggaagtggctttgaaaggcgc
ctccttttggatttctccaaaacagtgttttcaatgaatgagtttgagcagcattttctt
ccatgctttctagagtacgtcgaggactgcttctctggagaagatgtgctagctagggat
gaggcaatggcaattttggctaaactcattctggagaaagcagaacctcccactgttggc
tcaatggcttttgaaaaatatccccttgtttttacagaaccaccgataggatccaataca
agacagaagatgagtaagagaaatggagaaaggaaacaaatgccagtgttggatcatatt
ctgtctctaatccacttaccagaaaatgaagacattattgatctttcacacccttgggct
gcccttgttgtacttccgcatgttagaccaatagacaaggaaaaaatgctgctaccagtt
acaagttttatagaatctctcttcctggctattgacagaggaaggctccgcaaaggaggc
ttgtatgtggcctgccaagctgtgagcacgctacttagtttagcagaatcttctgaaatt
ctccatttgttacctgtggaacgtgtgaagaacttggtgagcacctttccttcagaccca
tcagccttgctactggctgatctctattatacgcggttggctttgtgtggttgccaggat
cctctttcccatgagaacttgatggatttgtttgataaactgaaagcaaatatttcctcc
agcatctccaaggtccgactcttgacaataaggattttaaatcattttgaggctcagctt
cctacatcaaccaaggaagatggaacaggagagcttcagtccgtgtttgccatattactt
caagctgaactcgtgccagccagtgtgaatgattatagagaaaaacttcttcatttaagg
aaactgaggcatgatgtggtgcagtctgcagtaccagatggacctttacatgaggtgcct
cttcagtatttactgggaatgctctacattaacttcagccctctctgggatcctgttgtt
gagctcataacatctcatgcaaacgaaatggagaataaacagttctggaaagtctattat
gagcacttggagaaagcggctgtctatgctgagagggagctgcaagatgagctgagtgaa
gagcaggcaggcgctgcagatgcagaaagtgagaagatccgagaaggaaatgtgggaagc
ctgtatctcgagcagctgaggtttagaacggattgcagtgagcggatagattacgcaaac
ttccggtttctgctttggaaggcattggccaaggttccagatagagtggagcccaggtca
agggagctttccccgcttctcttgagattcattagcaatgagtattacccagcagattct
ctggtggctccaacccaggatcttagaaagaaaaacagtggtgtagtagaagaggaagaa
aaacccactgaagagatacaccaagctaccaaggaggaggagaaagaggaggtggaggga
atggacgaaccggtggttgaagggttgcaaaaaaagaaaacaagaagagctgcagcaaag
cagctaatagcccatttgcaagttttctccaagttttcgaatccacgtgcgctgtatctg
gaaccaaagttaaatgagttgtacaatcagctgttgtcccatcaagaccagaatgtgcaa
aaagtagcccttgactgcatcatgacttacaagcatccacatctactgccatacaaggag
aacttgcaaaggttactggaagataagagctttaaagaagaaatagtccatttcagcata
tctgaggagaacactatagttaaaatgcaacaccgaccagatcttgttcttgttcttatg
agaattctgtatgggcgcatgagaaacaaaactggaagcagaactcagggcaaatctgct
gcaggcactcgtatgtcaattgttctgaggttccttgctggatcgctgcctgaagagatc
agaatgttcctggacctgctctttgaacctgtgaagcacttcagtgctggaccgtgccag
gttgcagtactccaaacaatatcagaactggatttatctaaagtcctgcctctaggccgc
cagcacagtctgttcaacagctttgaggttgtactgaaaaatatgggccatctgatcacc
cggtacttacctgagattttacagattttactttgtatgacagcaacagtatcccacatc
cttcaacaaagagagaagatccaactaaggtttattaacccactgaaaaatttgaggcgt
cttgggatcaaacttgtggcagagtttttttctgattttgagacctacagctttacagtg
gatgagattgatgccatttttgaggcagtgatatggccccagatcagcaggctcgcttcc
gagagccagtattctcctactctgttactcaaactcattcacatctggagcaagaattcc
aggtatttccctttgctggccaagcagagaccagggcacccagaatacgatacgctgttg
aatgtctttgctctgctatcgaccaagaatctctgtgaggcaacagctggtgttgtgatg
gatgtggctgacaacctcctcaatagtccagattttgaacccacagacctggtttccagc
ttgacagtgactgactgcgtttgtttggagtctgacaccgatggaatgacagaagagtcc
cccagcttgggtgcacggttaattctgcctcacgttcctgcagtacttcagtatctcagc
aaaaccatgttaaatgtggaaaaggtgaaaaagaaaaagttcagagctcaagtcagcaaa
gagctcaacattctttccaggatcagcaagtttatacaggacaagggtcagagttctgtg
ctcatcagcctcctcctccctttccttcaccagagtagcattatgcaggatacagagatt
gacatcttggtgacagtgcagaacttgctgaggcattgcttaaaccccacaagcttcctt
aagcctctggcaaaactgttttcggttatccagaacaaattatctcgacagacactctgt
gtggtttttcagactttatctgatctggaaggtgaattgaaatacattacggaggtagtt
aagttgaatgcctttgatcaacgacatctcgatgatatcaattttgatgttcgcttgtca
gcgttccaaggaatcacttctcaggtcaaagaaatgcaaagagtggacatcaactttctt
attccagttatgcataactgtttctacaccatacagttaggggacatgtctttaagtgac
agtgccagcctgtgcttgaccagtattatccaccggatagcagaaatcagccacacagaa
gatgaatacaaagaaataatccagcacactctcctgctgtctctgagaaaaggactgaag
agcaagactgagaacattcaacaagactatacttcattactttcctgcttgattcgaact
tttccaaagcacccagagtttcaagacttggtccagctaactgactgtcatgatcctgag
atggatttctttgagaacatgaaacatattcagatccacagaagagctcgagccttaaag
aaattggcgaagcagctaactgaagacaaaatcgtactgtcctccaaatctctgcagaac
tacatcatgccttatgcaactacgacgatttttgatgagaaaatgcttaagcatgaaaat
atgataacggcttcagttgaagttgtaggcgctgtttgcaggcatctctcttggtcagca
tatatgtaccatttaaaacatttcatacacgttttgcaaactggacagatgaatcaaaaa
ctggctgtcagcttgttagtgactgtgctagaagcttttcattttgaccatgaaaccctt
gaaaagcaacttgagactcttcagaatgaagatgcagaggccatggatgctgaggaagca
gcagagaatgaagccatggaattggagcagagtgagggggaggaggaggctgagggagac
aagagcaagaacctgcctgaggacagtgagaagcagggggatcctgcactgattcagcat
gaacaggcaggcaccggagaatctgaggagacccagaaagccacaaaatccatttcttcc
cttcccagaaataaggaggagctggagtgtctgattgaacacattcaaggaacagtaaca
ggcagcatcttgcccaaattacacaggtgtcttgccgcaaaggtgaaaagagatgaggaa
cacaaacttgtgaaatccaaggctgtgaacgatgaagaggtggttcgggtgccgttagcg
tttgccatggtcaaggtgatgcagtctctcccacaagaggtcatggaagctaacctgcca
agcattcttctgaaagtctgctcgcttctgaggaaccgggcgcaggaaatccgggacatc
gcacgcaacaccctcaccaaaatcatggaggctttaggagcacggtacctgcagtatgtc
ttaagagagatgcagtcgattctcatccatggctaccaggtccatgtgctgactttcact
gtgcacctgttactgaaaggcctgaccagcaggcttagcactggcgatttggacacctgc
ttagacattatgattgagattttcaatcaggagctgtttggggatgttgctgaggaaaag
gaagtgaaggggatagtctccaaggtcatggaggctcgcagaagcaagagttacgattct
tacgaaatccttgccaagtacgtagggaaggaccaagtcacgaagctcattcttccattg
aaagagattttagagagcaccatgagcttgaaaatgtcccgcaaggtgcacgaaacgtta
cgtcgcatcatgtcagggttgatcctaaatccggaaatgagcgcagaatccattctcgtg
ctcagccacggcctgatcagcgaaaatctgcccctgctaacggaaaaagccagaacgaaa
gccccggctcctccagatcctcgtctgcaaccagaaagctgcctgttactcccacccgtc
ccagctcgaggcgggcagaaagcacctgttagcagcaagactaacatgcatatcttggtc
gactcaggacttaggctactacacatgagcctgaagagatccaaaataaattcctcagat
gagcatgtgttagaaatgttggatccttttgttcagctgcttatagattgcctgcaatcc
acggatgttaaggtgatcaccggcgccctgcagtctttggtgtggattttaaagttccct
ttgccttctattgaaaagaatacagagcaactaaccaagcagctttttctgctgctgaag
gactttgccaagccaggagcagccaggggccagaacttccatttggtggtgaactgtttc
aaatgcgtaactagacttgtgaggaacacaaacagtcacataacagagaaacagctccaa
gtgttgctgggatatgctgaagaagatatctatgattcctcgcgtcaagccactgccttc
ggccttttaaaggctattttatccagaaagctgattgttcctgaaatcgatgccgtcatg
cagaaggttgccaagtttgccatcacaggccagagtgagccagtgcgagtccagtgcagg
cagatttacctgaaatacattctcgactatccccttggtgacaagctgaaacccaatttg
gagttcatatttgctcagctcaattatgactatgagacaggaagagagtctgcgctggag
atgattgcttacctcttcgaaatgttccctcagggattactccatcaatactgtgggctg
ttctttgtccctctctgtatgatgatggtaaatgacgactctgccaagtgcaagaaaatg
gcagccatggcaaacaaatctctgctcattaaagtagactctgcaaaccgagatctgatg
ttctcactagtcactatgtggtttaacagcgagaagagctcacacaagaggctagccacc
caggcctgtggtttgttcgtggaagccgagggagtggcgttcgaaagtcaacttggagcc
gttctcccactgatcgaaaaagaaattgaacctctgaaatttgaagatataacagaagag
actgaagaaaaggcagcagacagattgttgttcagttttcttactttgataataaaatta
atcaaggaatgcaacattattctgttaaccaaacataatgagattttgagcaatatctgg
cgtcatgttcagtcccatttgtggtacccgcacagctgggtgtggctgactgctgctcag
atttttggcttgttgtttgcttctcacaagccagaggaacttgttagcaaatggaatgag
aggaaggcaggcaaaagcaaaaagaccacggtggagccagcagcgaccaggttcttcaca
gatgagctggacaaaaagatgaaggaacttgctttagcgttctgtcaccagctgcagtcc
aagttcctggatcagtctctgggagagcaggttataaagaacttgttgttcgtggccaga
gttctctaccttctggtcccagattcagaggaaggggaggagaccaaagattatgaaatg
ggagggcaggagaatgcttctgaagatgaaggtgaaaaggcagcatctgctcaggaagag
aaggaaggcgaagcggaagagaaaagcagaccagccacagtgttgtgggtgatgaaaaga
ctctctctgatggcaaagcgagaagcagcatattcccctaaaaaccctgtgaagagaact
tgcatctttaagttccttggagctgtagcagtggatcttgggaaagacagaatcaagcca
taccttccaacaatcatcacccctctgcacagagagctgagtagcacctacgcagaacaa
gatccaacactgaagaacctctcccaggaaatcatagaactgctcaagaaattagttggc
ctggagaccttttcacttgcctttgcttctgtgcagaaacaggctagtcagaagagggct
atcaggaaaaaacagagagcactgcagactgtagcgaaccctgagattgctgccaggaag
aagctgaagaaacacaagaataaaatagaagcaaggaagaggaaaatagaattcctgcgc
cctggctacaaggcaaagaaaccaagaagccatgcgctaaaagacttagcaatggtggaa
tga
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integrated database retrieval system
