Chelonia mydas (green sea turtle): 102938588
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Entry
102938588 CDS
T02989
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmy03000
]
102938588 (SOX5)
Transcription factors [BR:
cmy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102938588 (SOX5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Cob_adeno_trans
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
102938588
NCBI-ProteinID:
XP_037771736
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All DBs
Position
1:complement(231029231..231431973)
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AA seq
791 aa
AA seq
DB search
MEFGAEETLVLLPGPFAALCGKQELTVRPTEMSSKRPASPYGEADGEVAMVTSRQKVEEE
ESDGLPAFHLPLHVSFPNKPRSEEFQPVSLLTQESCGHRTPTSQHNTMEVDGNKVMSSFA
PHNSSTSPLKAEEGGRQSGESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEET
PSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDE
QKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIP
VFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQL
YAAQLAAMQVSPGGKIPGIPQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKP
KTSEGKSPTSPTSPHMPALRINSGAGSLKSSVPATLASPSARVNTIDILSSITSSGYLND
HDAVTKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNCRTEKDKTTLDSLTQQLAVKQ
NEDGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERR
KILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRT
CLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIATTGVVYPGAIAMAGMPSPHLP
SEHSSVSSSPEPGMPVIQSTYGIKGEEPHIKEEMQASDINGEIYDEYDEEEDDPDVDYGS
DSENHIAGQAN
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggagtttggagctgaggaaactttggttttgttgccaggaccgttcgcagcactttgt
ggcaagcaagagctaacagtgagaccgacagagatgtcttccaagcgaccagcctctccg
tatggggaagcagatggagaggtagccatggtgacaagcagacagaaagtggaagaagag
gagagtgacgggctcccagcctttcaccttcccttgcatgtgagttttcccaacaagcct
cgctctgaggaatttcagccagtttctctgctgacgcaagagagttgtggccataggact
cccacttctcagcacaatacaatggaagttgatggcaataaagtgatgtcttcatttgcc
ccgcacaactcatctacctcacccttgaaggcagaagaaggtgggcgtcagagtggagag
tcattgtccagcacagccctgggaacccctgaaaggcgtaaaggcagcttagcagatgtt
gtagacactttaaagcagagaaaaatggaagagctcatcaaaaacgagccagaagaaact
cccagtattgaaaagctactatcaaaggactggaaagacaagcttcttgccatgggatca
gggaactttggagaaataaaagggactccagaaagcctagctgagaaagaaaggcagctt
atgggtatgatcaatcaactgaccagtttgcgtgagcagctgctggcagctcatgatgaa
cagaagaaactggctgcatcacaaatcgagaaacaacgccagcaaatggagctggctaag
cagcaacaagaacagattgcaagacaacagcagcagcttctgcagcagcaacacaaaatt
aaccttcttcagcaacagatccagcaggttcaaggtcagcttcctccattgatgattcca
gtgttccctccagatcaacgaaccctagcagcagccgctcagcaaggattcctccttcct
cctggtttcagctacaaggcaggatgcagtgacccttaccctgttcagctgatcccaact
accatggcagctgctgccgcagcaacaccaggcttaggcccactccaactgcagcagttg
tatgctgctcagcttgctgcaatgcaagtgtctccaggaggcaagatacctggcataccc
caaggcaaccttggtgctgctgtttcccctaccagtatccacacagacaagagcacaaac
agtcctccacccaaaagcaaggatgaagtggcccagccgctgaacctctcagctaaaccc
aagacgtctgagggaaaatctccgacatcgcccacttctcctcatatgccagctctgaga
ataaacagtggggccggttcactcaaatcctcagtgccagcaacattagccagtccttca
gccagagttaacacaatagatattctttcttctatcacgtcgtcaggttatttaaatgac
cacgatgctgtcaccaaggcaatccaggaggcccgacagatgaaggagcaacttcggagg
gagcaacaggtgcttgatgggaaggtggctgttgtgaatagtctgggtctcaataactgc
aggacagaaaaggacaaaacaacactggatagcttgactcaacagctggcagtaaaacag
aatgaagacgggaagtttagccatgctatgatggatttcaacatgagtggggattctgac
ggaagtgcaggtgtctcagaatctagaatttatcgggaatccagagggcgtggaagtaat
gaacctcatatcaagcgtccaatgaatgccttcatggtgtgggctaaagatgagcgaagg
aagatccttcaagccttccctgacatgcacaactccaacattagcaagatactgggatct
cgctggaaagctatgacaaacctagagaagcagccatactatgaggagcaggcccgactc
agcaagcaacacctggagaaatacccagactataaatacaagcccaggccgaagcgcacc
tgtcttgtggatggcaaaaaattgcggatcggcgagtacaaggcaatcatgcgcaacagg
cgacaagagatgaggcagtattttaatgttgggcaacaagcacagattcctatcgccacc
actggtgtagtctacccaggagccatcgccatggcaggaatgccctccccccatctgcca
tcagagcactcgagtgtgtccagcagcccagagcccgggatgcctgtcatccagagcact
tatggcatcaaaggcgaggaaccccacatcaaagaggagatgcaggccagtgacatcaat
ggagaaatctacgatgagtacgacgaagaagaggacgaccctgatgtggactacggcagt
gacagtgaaaatcacattgcaggacaagccaactga
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