Chelonia mydas (green sea turtle): 102938796
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Entry
102938796 CDS
T02989
Symbol
AMBRA1
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1 isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04137
Mitophagy - animal
cmy04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102938796 (AMBRA1)
04137 Mitophagy - animal
102938796 (AMBRA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmy04131
]
102938796 (AMBRA1)
03029 Mitochondrial biogenesis [BR:
cmy03029
]
102938796 (AMBRA1)
Membrane trafficking [BR:
cmy04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
102938796 (AMBRA1)
Mitochondrial biogenesis [BR:
cmy03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
102938796 (AMBRA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
eIF2A
PRIMA1
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
102938796
NCBI-ProteinID:
XP_037756104
LinkDB
All DBs
Position
6:complement(60925558..61120137)
Genome browser
AA seq
1302 aa
AA seq
DB search
MKVVPEKNAVRILWGRERGTQALGAQRLLQELVEDKTRWMKWEGKKVELPDSPRSTFLLA
FSPDRTLMASTHVNHNIYITEVKTGKCVHSLVGHRRTPWCVTFHPTIPGLIASGCLDGEV
RIWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEM
ERVRLVRFDPLGHYLLTAIVNPSNQQSDEEVEIPVDSTDMPHYRQRSILQSQPVRRTPLL
HNFLHMLSSRSSSIQVGEQNTVQDSATPSPPPPPPPPPPPLPPASENTRASAYTRLRERV
NYPTTECCQHLGMLCLCSRCSSARLPSSLFPHQENAPSTSSGATGTSFSSVQTEPYQPPE
QVSTTQQEQGLLNRPSAFSTVQSSTAGNTLRNLSLGPTRRSLSGPLSGHPSRYQSAREMA
SGLGGSDWTRTVLNMGSRSELEAMPPPRTSASSVSLLSVLRQQEGGSQSSVYTSATEGRG
FLAPGAEADSSGGAGPSNPASIRNELQCDLRRFFLEYDRLQELDQGIGGEPSQSQQAQEM
LNNNIEPDRPGPSHQQTPHSSENNSNLSRGHLNRCRACHNLLTFNNDTLRWERSTPSYPS
GQVQSTFDGVPPSSSQAQPAERTEGRAPTSSRLQLGSSSNPQEERTVGVVFNQETGHWER
VYSQSASSRPGNVSQEALSQEMPEESSEEDSLRRRLLESSLISLSRYDGAGSREHPIYPD
PARLSPAAYYAQRMIQYLSRRDSIRQRSMRYQQNRLRSSSSSASASENQGPSVEGNDLEF
EDFERDNGDRSRHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLATHSSV
NRVLAGAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASC
DISADGQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRY
VMVGLASRRILLHPSTEHMVAQVFRLQQPHGGETSMRRVFNVLYPMPADQRRHVSINSAR
WLPEPGLGLAYGTNKGDLVICRPEALNSGVEYYWDQLNETVFTVHSSNRSTERPGTSRAT
WRTDRDMGLMNAIGLQPRNPTTSVTSQGTQTLAPLLQNAETQTEREVQEPGAATSGTGEG
EGPEYGASGDDALSRIQRLMAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRSSQTG
VESVGADGALMQQSTSRELAAELEGRILSESMQLAEHGQSPQTAPGRSEGQGADGLDLPE
QSQSSMDTEGPIEYSDLANNNHLPDNTNYYSNDSTSGESRNR
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttgtaccagagaagaatgctgtgcggatcctgtggggcagagaacgtggcacc
caagccttgggtgctcagcggcttttgcaggagctggtggaggataaaacccgatggatg
aaatgggagggcaagaaagttgagctaccagacagcccacgttccacgttcttgctggcg
ttcagcccagataggaccctcatggcttccacccacgtgaatcacaatatctacatcaca
gaggtgaaaacgggcaagtgtgtccattctttggttggacatcggcgcacaccgtggtgt
gtgacctttcaccctactatcccgggactcattgcttcagggtgcctagatggggaggtt
agaatctgggatttacatggtggaagcgagagctggttcacagacagcaacaatgccatt
gcatccctggcttttcatcctacggctcagctcctgctgattgcaacagccaatgagatc
catttctgggactggagtcgtcgagaaccctttgcagtggtgaagacagccagtgagatg
gagcgagtccggctggtacggttcgatcccttgggacactacttgctcacagcgattgtc
aacccttctaaccaacagagtgacgaggaggtggagatccctgtggatagcacagatatg
ccacattatcgccagcgctctattctccagtctcagcctgtgaggcgtacgcccctcctc
cacaacttcctgcacatgctgtcctcacgctcctctagcatccaggtgggagagcaaaac
actgtgcaagattctgccaccccatccccaccacctccgccacccccaccacctccacca
ctgcctccagccagcgagaacaccagagcatcggcctacaccaggctccgtgagcgtgtc
aattaccccacaacagagtgctgtcagcacctggggatgttgtgcctttgcagtcgatgc
tctagtgcaagacttccttcttctctcttcccgcaccaggaaaatgccccctccacttcc
tctggggccactggcacttccttttcctctgtgcagacggagccataccaacccccagag
caggtgtccacaacacagcaggagcagggtctgcttaacaggccttctgctttcagtact
gttcagagcagcactgctggcaacaccctacgcaaccttagcctgggccccactcgcaga
tccctcagtgggcccttgtcaggccatccctccaggtaccagtctgcgagagagatggca
tctggcttaggagggtccgactggactagaacagtgctgaacatgggctctcgctcggag
ttggaagccatgcctccacctagaaccagtgcctcttcagtgagtttgctgtcagtgctc
agacagcaggagggaggttcccagtcctcggtgtatacatctgctacagaagggaggggc
ttcctggcaccaggggctgaagcagacagcagtggtggtgctggcccaagcaatccagcc
agcatccgcaatgagctccagtgcgacttgagacggttcttcttggagtacgaccgactt
caagagctagatcaagggattggtggggagcccagccagtcgcaacaggctcaagaaatg
ctcaacaacaacattgagcctgataggccaggtccctcccaccagcagactccacatagc
agtgaaaacaattccaatttgtctcggggccacctgaaccgctgtcgcgcctgtcacaat
ctgctgacctttaacaatgacacactacgctgggaaagaagcacacccagctatccatca
gggcaggtccaaagcacatttgatggcgtgccaccaagcagcagccaggcgcagcctgca
gagagaaccgagggcagagctcctacctctagcaggctgcagctgggaagctcttccaac
ccgcaggaggaaaggactgtgggagtggtctttaaccaggagacagggcactgggagaga
gtttacagccagtcagcttcgagcagacctgggaatgtatcacaggaggccttaagccag
gaaatgcctgaggaaagttctgaggaggattcgcttaggaggagactgctggagtcttcc
ctcatttcattatcacgctatgacggagcagggtcccgggagcacccaatctacccagat
ccagccaggttgtctcctgcagcatattatgcccagagaatgatccagtatctttcccgg
agggatagcattcgccagcgctccatgcgttaccaacagaatcgtcttcgctcttcctcg
tcatctgcttccgcctcagagaaccaaggcccgtctgtagagggaaatgatctggagttt
gaagactttgaaagggacaatggagacagatcaaggcaccgagctccccggaacgcccgt
atgtctgcaccatcgcttgggcgcttcgtccccaggcgtttcttgctgccagagtactta
ccttatgctgggattttccatgaacgcggacagccagggttggccacccactcctctgtt
aaccgggtcttggcaggggctgtgattggagatggacagtcagctgtagccagcaacatt
gccaataccacctaccggctccagtggtgggacttcaccaagtttgacctgcctgaaatc
agcaatgcctctgtgaatgtgcttgttcagaactgcaagatttataatgatgctagctgc
gatatctctgcagatgggcagctcctggcagccttcattcccagcagtcagcggggcttt
cctgatgaaggcatactggctgtgtattctctggcacctcacaacctgggcgagatgcta
tacacgaaaagatttggccccaatgcaatttctgtgagcctgtctccaatgggcaggtat
gtgatggtgggactggcttcccggcgcattctcctgcacccttccacagaacacatggtg
gctcaggtcttcaggctgcagcagccacatggtggagaaacatccatgaggagagttttc
aacgtcctatacccgatgcctgctgaccagaggagacacgtcagcataaactctgctcgc
tggctacctgagccaggcctgggattggcatatggcactaacaagggggacctggtgatt
tgccgaccagaggccttaaactctggagttgagtactactgggaccagctgaatgaaact
gtcttcactgtgcattccagcaaccggagcaccgagcggcctggaacaagcagagccaca
tggaggacagacagagacatgggcctaatgaatgccataggtctgcagcccaggaacccc
accacctcggtaacatcacagggtacccagaccctggctcctctgctgcagaatgcagag
actcagacagagagggaggtacaggagccaggtgctgctacctcaggaaccggagaaggt
gaaggtccagaatatggagccagtggggacgatgccctcagcaggatccaaaggctgatg
gctgagggtggcatgactgctgtggtccagcgggagcagagcaccactatggcatccatg
ggcggctttggcaacaacattattgtgagtcaccggattcaccgcagctctcagactggt
gtggaatctgtgggagctgatggtgccttgatgcagcagtccacctcgcgtgagctggca
gccgagctggagggacggatcctttcagagtctatgcagctggcagagcatggccagagc
ccgcagacagctcctggcaggagtgaaggacaaggagccgatggactggatctgccagag
cagtcccagtcctctatggacactgagggaccaattgaatacagtgacctagccaataat
aaccatcttcccgacaataccaactactatagtaacgacagcaccagtggggagtcgcgg
aacaggtag
DBGET
integrated database retrieval system
