Chelonia mydas (green sea turtle): 102938930
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Entry
102938930 CDS
T02989
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04270
Vascular smooth muscle contraction
cmy04625
C-type lectin receptor signaling pathway
cmy04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
102938930 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
102938930 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
102938930 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmy04131
]
102938930 (ARHGEF12)
Membrane trafficking [BR:
cmy04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102938930 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Ribonuc_2-5A
Motif
Other DBs
NCBI-GeneID:
102938930
NCBI-ProteinID:
XP_037738342
LinkDB
All DBs
Position
22:complement(12123426..12226530)
Genome browser
AA seq
1542 aa
AA seq
DB search
MSGTQSTITDRFPLKKPTRHGSILSRETPADKKQKVERCSSTHDFDPTDSSSKKTQSSSE
ESRSETYGLVQRCVIIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTNSNHGDVVKLIKSGSYVALTVQGRPPGSSQIPLADSEVDPAAFGHMSPIMTSPHSP
GTSGNTERITSPVLMEEENNIVHNQKVEILRKMLQKEQERLQSLQEDYSRTPTPRLLKEI
QETKKHIPQLQEQLSKATGSTQDGVLSSRSVTESLQISEVEAESGDGLSKIDYSSGDGSR
PNSDIADSPRSGLKERIYLEESPEKSEIQDTDSQSSIGSPSTRLAPQIIGAEDDDFDAEQ
EQINGQCSCFQNIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYTDLYKQTNSKETRRVF
LEFNQFFLDRAANLKVPVPDEICIDLEKRRPELIPEELHRHYIQTMQDKVYPDVQRHLED
FRQKRSMGLTLAENELTKLDAERVRDRITLERERACAEQIITKIEEVLMTSQPLEEDKSS
TMQYVILTYMKYLGVKVKEPRSLEQKRGRIGFLPKIKQSIKKEKEGEEKVKRRGFPSILG
PPRRPSRHDSSAIGRAMEMQKQRHPKHLSTVSSVSPEPPDSVKMRQSGSSSDGTDMTCPP
ANPMSPLAMGPFTSPEGSKDSETGPKQSGDAPPLSDSVDGAPRTPNTVFDFPSPLLDQLQ
EEEGELDRLADLGTPKPFRKMDSVGFGDIQSEDELFDFDTETDPPNWQQLVSQEVLLGLK
PYEIKRQEVINELFYTERAHVRTLKVLHQVFYQRVFREGILTPSDLRKIFSNLEDILLLH
TGLNDQMKAVRKRNETSVIDQIGEDLLTWFSGAGEENLKHATATFCSNQPFALEVIKSRQ
KKDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYSERPEEKEKVKK
AADHCRQILNYVNQAVKESENKQHLEDYQRRLDLSYLKQSEYPMLDEIRNLDLTKRKMIH
EGPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLRCHSKILASTSDSKHTFSPVIKL
NTVLVRQVATDNKAFFVISMSENGAQIYELVAQTVSEKTVWQDLIARMAGTVKVEASKRP
IPLPQSGPGDEEREEEEQQKLKDEQHDIPASGMQSPDKDLGLESPLMLKAQSPSAILAEK
SEVVDLLVTERHFEKEQRAELTLKEPSGHYGPAIPFQISEERWALDALRNLGLLKQLLVQ
QLGMPEKGTLEDWRCFPRYRAISRGAQAESGIQHGLRHSGDKMQQPGTDQRPPGTGTSES
AACYGLWTSSEFPAPLDAVQLGSRDTRSSNNLVMDHMSMNLETPTPELEGVGADDSGEHF
FDAREAHSDENPLEGEVMERKEDEEVHLRISGNYLILDGYGTVQESSTDEDVSSLVLQCT
AGHSSLDSAHQQPISPRDAQSDEGSSPFAEEFMASRWGPVDELCSDAPSPHLSVESRVQM
MQYIQKIEADLEHLKEVEENYTTLLRQRLAGSAPTDEHSDKS
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtccacaatcacggacaggtttcctctcaaaaaacctacaaggcat
ggcagcattctgagcagagagactccagctgacaagaaacagaaggttgaacgctgcagt
agcacacacgacttcgatccgacagatagctcctccaagaagacacagtctagctcggag
gagagtagatccgagacatatggtctcgttcagcgttgtgttattatccagcgggatgaa
aatggatttgggctgacagttagtggagacaatccagtctttgtgcagtcagtcaaagaa
gatggagcagctatgcgggctggagtgcagacaggtgatcgtatcatcaaggtgaatggg
actcttgtaacaaactcaaaccatggggatgtggtgaagctgataaagtcgggttcctat
gtagctctcactgtgcaggggcgcccaccagggtcgtcccagattccattagctgattct
gaagtggatccagcagcatttgggcatatgtctcccatcatgacatctccccattcgcct
ggcacatctggaaacacagagaggattactagcccagtgctgatggaggaggagaacaat
attgttcacaaccagaaagtggagattctgagaaagatgctgcagaaagagcaggagcgg
ctgcagtccttgcaagaagattacagccgaacacccaccccgcgactgcttaaggagata
caggaaactaagaagcacatccctcagctgcaagagcagctgtccaaagccacaggctct
actcaggatggagttttgtcctccagatctgtgacggagtcactgcagatcagtgaagta
gaagcagagagtggggatgggctgagcaaaatagactacagcagtggtgatggctcccgg
ccaaacagtgacattgctgatagtccccggagtggcctgaaggaacggatttacctggag
gagagtccagagaagagtgagattcaagatactgattctcaatccagtattgggagtccc
tccacccgcctggcacctcagatcattggagcagaggatgacgactttgacgctgaacag
gagcagatcaatgggcaatgcagctgtttccagaacatagagctgctgaaatctcgcccg
gctcacttggctgtgttcctgcatcatgtggtgtcccagtttgacccggcaacgctgctc
tgctatctttacacggacttgtacaaacagaccaactccaaagagactcgtcgtgtcttc
cttgagtttaaccagttcttcctggaccgagctgcgaatctgaaggttcctgttccagat
gaaatttgtatagatctagaaaaaagaaggccagaactcattccagaggaattgcaccgc
cattatatccaaactatgcaagataaagtctatccagatgtccagaggcatctggaagat
ttcagacagaagcgtagcatgggattgacgctggccgaaaatgaactgaccaagctggat
gcagaacgtgtccgtgaccggatcacgctggagagagagagagcgtgtgcagagcagata
attaccaaaatcgaggaggtgttgatgacttctcagcctctggaagaggacaagagttca
accatgcagtatgtgattctcacctacatgaaatatctgggcgtgaaagtcaaggagccc
cggagcttggagcagaagcgtggacgtattggtttcctgccaaagataaagcaaagtata
aagaaagagaaagaaggggaggaaaaagtgaagaggagaggcttccccagtatcctggga
cccccaaggagaccgagtcgccatgacagcagtgcaattggcagggccatggaaatgcag
aagcagcgccatccaaagcacttatccacagtctcttcagttagtccagagccgccagac
tctgtcaagatgcgccagagtgggtcctctagcgatggcacagacatgacgtgccctcct
gccaatcccatgtctcctttagctatggggccctttacctccccggagggaagcaaggac
agcgagacaggccccaagcaatctggagatgctccacctcttagcgactctgtggatggc
gcaccccgcacccctaacaccgtctttgatttcccatcccctctgctggaccagctgcaa
gaggaggaaggagaacttgatagattagctgacttgggaacaccaaaacctttccgaaag
atggacagtgtgggcttcggggatattcagagtgaggatgagctgtttgattttgacact
gagactgatcctcccaactggcagcagctggtgagccaagaggtgctgctggggctgaaa
ccctatgaaatcaaacgccaagaagtgattaatgagctgttctacactgagcgagctcac
gtccgcacgctgaaggttctgcatcaggtcttctaccagcgtgtattccgtgaaggcatc
ctgaccccctctgacctgcgcaaaatcttttcaaacctagaggatatccttctgctccac
actggtttgaatgatcagatgaaagctgtccgtaaacggaatgagacctctgttattgat
cagattggggaagacttgctaacctggttcagtggagcaggagaggagaacctgaaacac
gcaactgccaccttttgtagtaaccagccttttgctctagaggtgatcaaatcacggcag
aagaaagactctcgcttccaaacctttgtgcaggatgctgagagcaatccactgtgtcgc
cggttgcagctgaaagatatcattcccactgagatgcagaggctgactaagtaccccctt
ctgctggataatatcgctaagtactcagaacggcctgaggagaaggagaaagtgaagaaa
gcagcagatcactgccgtcagatccttaactatgtgaaccaggctgtcaaagaatcagag
aataagcagcatttggaagattatcagcgtcgccttgacctgtcctacttgaagcagtcg
gagtaccctatgctggatgagattaggaacttggatttaaccaagaggaagatgattcac
gaaggacctctgacctggaaggttaatcgggacaagactattgatctctacacgctgctc
ttggaggatattctagtgctgttgcaaaagcaagacgataaactggtgctgaggtgtcac
agtaagattctggcatccacctctgacagcaaacacacattcagtcctgttatcaagctg
aacactgtgctggttcgccaggtggcgacagataacaaagctttcttcgtcatctccatg
tccgaaaacggcgcccagatttatgaattggtggcacagactgtttctgaaaagactgta
tggcaggacctgatcgctcggatggcagggacagtaaaagtcgaggcatctaaaaggccg
attccattaccacaatcaggacctggcgacgaggagcgtgaggaagaggagcagcagaag
ctgaaagacgaacagcatgatatccctgccagtggtatgcagagtccagataaagatttg
ggacttgagtctcccttgatgctgaaggctcagtctccttcggcaatcctggctgagaag
tcggaggtggtagatcttcttgtgactgaaagacattttgagaaagagcaacgggcagaa
ctgactctcaaagaaccctctgggcactatggaccagcgatccctttccagatctcagaa
gagcggtgggcactggatgcactaagaaacttgggcttgctgaagcagttgttggtgcag
cagctgggcatgcctgagaaggggacccttgaagactggcgatgttttcccaggtatagg
gccatttcccggggggcccaggcagagagtgggatccagcatggactacggcattctggc
gacaagatgcagcagcctggaacagaccagaggcctcccggaacaggaactagtgaatcc
gcagcttgttatggtctctggacttcatccgagtttccagctccactggatgctgtgcag
ctggggtctagagacaccaggtctagtaacaatttagtaatggaccatatgagcatgaac
ctggagacccctaccccggagctggaaggggtgggtgctgatgacagtggagagcacttc
tttgatgctcgtgaggcccacagcgatgagaatccattggaaggtgaagtaatggagagg
aaggaggatgaggaggtgcacttacggatctcaggaaattatttgatccttgatgggtat
ggaaccgtgcaggagagctctacagatgaggacgtgtcctctctagtcctacagtgcact
gcgggccactcctctttggactcagcacaccagcagccgatttccccacgagatgcccag
tccgatgaagggagctccccgtttgccgaggaattcatggcctcgcgctgggggccagtg
gacgaattgtgctccgatgcaccgagcccccacctctccgtagagtcgcgtgtccaaatg
atgcagtacattcagaagatagaggctgaccttgaacacttaaaggaagtcgaggaaaat
tacaccactctccttcgccaaaggctggctggctcagcccccacagatgagcattcagac
aaaagttag
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integrated database retrieval system
