Chelonia mydas (green sea turtle): 102939095
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Entry
102939095 CDS
T02989
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102939095 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cmy04990
]
102939095 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
cmy04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
102939095 (LDB3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
102939095
NCBI-ProteinID:
XP_037761137
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All DBs
Position
7:complement(71554380..71754941)
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AA seq
835 aa
AA seq
DB search
MSYNVTLNGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSHMNQGDLVVTIDGVNTDGM
THLEAQNKIKSASYNLSLTLQKSKRPAPVPTATPKVDSPRPVIPHQKDPALEVSGNRTIF
SPLTSTATGPLGSILATNGTFSGYLSKQEISCSNSSSFLKTTAVRTSMASLSVTPDISPA
KSDLGSKLSPVFTDGSSPKHQLSPARQYNNPIGLYSAETLKEMVEMHKLSLKRRASEGGL
PRGHDLLFMIQRDGARRRAKVIANTAANTEYVERFNPNVLKDSALSTHKPIEVKGPGGKA
TIIHAQYNTPISMYSQDAIMDAIAGQAQAQGGELAGESPLASLPVKDPHIDSASPVYQAV
LKTQNKSEDELDDWTRRSANLQSKSFRILAQMTGTEYMQDPDEEALRRSSTPVEHAPVST
SSASVPVPVASANQPATATQNTSNQMTPPSATPISVVQDSFSSSFQRVLAGPSSLSQPKP
FPGSKNMSLAASTVSSAISAQSSFNRHSSTSISYQSKKRGTGQSYTSTPVFQGTAPSSGY
SESPVPAPKPRVVTTASIRPSVYQPAPAPVHSYTPGKADPSCRPPWVTDDSFSQKFAPGK
TTTSVTKHTLPRGAPAPSPASTSAYSSPSISASSQTPAVARGTIQRAERFPASNRTPLCG
HCNSIIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNSVYCERCYEQFFAPTCAR
CNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYIALFSTKCHGC
DFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacaacgtgactctcaatggacctggaccatggggtttccgactgcaaggggga
aaggacttcaacatgcccttgaccatatccagaatcacccctggcagcaaagcagcccaa
tcacacatgaaccagggggaccttgtggtaaccattgatggagtcaacacagatggcatg
acccacttagaggcccagaacaagatcaaatcagccagctacaacctgagccttaccctt
caaaaatctaaacgcccagctccagttccaacagccacacctaaagttgactctcccagg
cctgtaattccccatcagaaggaccctgctttggaagtcagtggcaacagaacaatcttc
agtcctctaactagcacagcgactgggcctttgggtagtatattagccaccaatggaaca
ttttcaggctacctcagcaagcaggagatcagctgttcaaatagctcttccttcttaaag
actactgcagttagaacttccatggcctctctgtctgtgacacctgacatttcacctgca
aagagtgacctaggttcaaaactaagccctgtgttcactgatggcagtagtcctaaacac
cagctgagccctgcaaggcagtataacaaccccattggcctttactcagcagagactcta
aaggaaatggttgagatgcataaattaagtctcaaacgaagggcttcagaaggtggactt
cctagaggacatgatctcctattcatgatccagagggatggggcaagaaggagggcaaag
gtcatagccaacactgctgccaacactgagtatgtggaacgcttcaaccctaatgtcctg
aaggactctgccctgtctacacacaagcccattgaggtgaaaggcccaggtggcaaggcc
actataattcatgcccagtataacaccccgatcagcatgtattcccaggatgctatcatg
gatgccatcgctggccaggcacaggcccaaggtggtgaacttgctggtgaatctccattg
gctagccttcctgttaaagatcctcacatagacagtgcctctccagtgtatcaggctgtg
cttaaaactcagaacaagtctgaggatgagcttgatgactggactcgccgttctgccaat
ctgcagtccaagtctttccgcatcctcgcccagatgacaggaacggagtacatgcaagac
ccggatgaagaagccctgaggagatcaagtacccctgttgagcatgcgccagtgtctacc
agctctgcctctgttcctgtaccagttgcttcagccaatcagcctgctactgctactcaa
aacacgtccaatcagatgacaccaccatcagccactcctatctctgtagtgcaagattcc
ttctcttcctctttccaaagagtgcttgcaggccccagctctctgtcacagcctaaacct
ttccctgggtccaagaacatgtcactagcagcttccactgtttcgtctgctatctctgct
cagtctagcttcaaccggcattcttccacctccatcagctaccagtcaaaaaagagaggt
acgggccagtcctatacatcaacaccggttttccagggtaccgctccttcctcaggctac
agtgaaagtccagttcctgctccaaaaccaagagttgtcactactgctagcataaggccc
tctgtctaccagccagcaccagcaccagtgcattcttatacaccagggaaggctgatcct
tcgtgccgccctccttgggtaacagatgactccttttcccagaaatttgcacctggaaaa
accaccacctccgttaccaaacataccctaccacggggtgctccggcaccatctcctgcc
tcaacttcagcctactcgtctccttcaatatcagcctcttcccagactcctgctgtagcc
aggggaacaattcaaagggctgagcgtttcccagccagcaaccgaactcctctttgcgga
cactgtaacagcataattcggggtcctttcctggtagccatgggccgttcctggcaccca
gaggagttcaattgtgcttactgcaagacatctttagcggatgtgtgctttgtggaggag
cagaacagtgtgtactgtgagcgctgttatgagcagttctttgcaccaacctgtgccaga
tgcaacaccaagatcatgggggaagtgatgcatgctttaaggcagacttggcacacaact
tgctttgtctgtgctgcctgtaagaaaccgtttgggaatagcctcttccacatggaggat
ggggagccctactgtgagaaagattacattgctttgttcagcacaaaatgccatggctgt
gattttcctgttgaagcaggagataaattcattgaagcccttggacacacttggcatgat
acctgctttatttgtgctgtgtgccatgtgaatttggaaggtcagccattttactccaag
aaggataagccactgtgcaagaaacatgctcatgccatcaatgtctaa
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