KEGG   Chelonia mydas (green sea turtle): 102939141
Entry
102939141         CDS       T02989                                 
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
cmy  Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cmy04131]
    102939141 (COPB2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cmy04147]
    102939141 (COPB2)
Membrane trafficking [BR:cmy04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    102939141 (COPB2)
Exosome [BR:cmy04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   102939141 (COPB2)
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st NBCH_WD40 ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP PEP5_VPS11_N Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_LRRK2 Beta-prop_WDR35_TULP_N HEAT_GCN1
Other DBs
NCBI-GeneID: 102939141
NCBI-ProteinID: XP_027680693
LinkDB
Position
9:41013027..41039173
AA seq 921 aa
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDSNGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVAVAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEGAE
KDGKNNVAFMSYFLQGKVDCCLELLIKTGRLPEAAFLARTYLPSQVSRVVKMWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVVEDYVKETHTDLRPAKEYPLVTPNEERNLLEEAK
GFEPSGVVVSQESEEKELVPSPKPVGAPPVPGNSDHLPMTKDEKALLDLDDLDNLEVEDI
DTTDINLDEEILDDDLILICD
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgcctctccgactcgatattaagcgaaaactaacagctcggtctgaccgagtaaagagt
gtggacttgcaccctaccgagccatggatgttagctagcctgtacaatggcagtgtctgt
gtttggaatcatgaaacacagactctagtgaagacctttgaagtatgtgacctgccagtc
agagctgcaaaatttgtggcaagaaaaaactgggttgtgacaggagctgatgacatgcaa
attagagttttcaattacaataccttggaaagagttcacatgtttgaagcacactccgat
tatattcgttgcattgctgtacatcctactcagcctttcattctaactagcagtgatgac
atgcttattaaactctgggactgggataaaaaatggtcttgttctcaggtgtttgaagga
cacactcattatgttatgcagattgtcataaacccaaaggataataaccagtttgccagt
gcctctttggataggacgattaaggtgtggcagcttggttcttcttcacccaacttcact
ttggaaggccatgaaaaaggagtgaattgcatcgattattatagtggaggagacaagcct
tacctcatttcaggagcagatgatcgccttgtcaagatttgggattaccagaataaaacc
tgtgtgcaaacactggagggacatgctcagaatgtatcctgtgtcagcttccaccctgag
ctgccaatcataatcacaggctcagaagatggaactgtccgcatttggcattcgagcacg
tatcgcttagaaagtactctcaactacggcatggagagggtgtggtgcgtggccagtctg
agaggatccaataatgtagctttgggttatgatgagggcagcatcattgttaagcttggc
cgtgaagaacctgccatgtctatggattcgaatggaaaaattatttgggctaaacactcg
gaagtgcaacaggctaatttgaaagctatgggagatgctgaaattaaagatggagaaaga
ttgccactggctgtaaaggatatggggagctgtgaaatctatccccagaccattcagcac
aaccctaatggacggtttgtagtagtatgtggggatggtgaatacatcatttacacagct
atggctttgaggaacaagagttttggttctgcacaggagtttgtatgggcacatgattct
tcagagtatgcaatcagggagagcaacagcgttgtaaagatatttaagaacttcaaagag
aagaagtcctttaaacctgattttggtgcagagggtatctatggaggtttcttactgggt
gtcagatctgttaatggcttggcattttatgactgggataacacagagttgatacgcaga
attgaaattcagcccaaacatattttctggtctgactctggtgagctggtctgtattgcc
acagaggaatcattcttcattctgaagtatctatctgaaaaagttgcagtggcgcaggaa
acacatgagggagtcactgaagatggtattgaagacgcttttgaggttcttggtgagatt
caggagattgtgaaaacagggttgtgggtaggcgactgttttatttacaccagttctgtg
aacagactgaactattatgttggaggagaaattgttactattgcccatttggataggaca
atgtatctattagggtacatccccaaggacaacaggctttatctgggtgataaagagcta
aacatagtcagttactccttgttggtctcagtgctcgagtaccagacagcggtaatgagg
agagactttggtatggctgacaaagttcttcctacaattccaaaggaacagaggactaga
gttgcacattttcttgaaaaacagggcttcaaacaacaagctcttgcagtatccacagat
cctgaacatcgcttcgagcttgctcttcagcttggagaattaaagattgcataccagctt
gccgtggaagcagagtcagaacagaagtggaagcaacttgctgagcttgccatcagtaaa
tgccagtttggcttagcccaggagtgtctgcaccatgcacaggactatggaggtttattg
ctattggccactgcttcaggaaatgctaacatggtgaacaagctagcagaaggagcagaa
aaagatggcaagaacaatgtagcttttatgagctactttttgcagggaaaggttgactgt
tgtttggaactcttgattaaaactggacgtttgccagaagctgccttcttagcacgtaca
tatttgccaagccaagtttcaagggttgtaaaaatgtggcgagagaatctctctaaagtc
aatcagaaagctgcagagtccctggctgatcccacagagtatgaaaacctgttccctgga
ttaaaagaagcttttgttgttgaagactatgtaaaggaaactcatactgacttgcggcca
gctaaggaatacccgcttgtcactccaaatgaagaaagaaatttactggaagaagcgaaa
ggttttgaaccttcaggagtagtagtatcccaggaatctgaagagaaagaactagttcca
tctcctaaaccagtaggggcgcctccagttccaggaaactctgatcatcttccaatgaca
aaagatgaaaaggcactactagacttggatgatttggataacttggaggtggaagatatc
gatactacagatatcaatctggacgaagagatcttagatgatgacttgattcttatttgt
gactaa

DBGET integrated database retrieval system