Chelonia mydas (green sea turtle): 102939245
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Entry
102939245 CDS
T02989
Symbol
VPS28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog isoform X1
KO
K12184
ESCRT-I complex subunit VPS28
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102939245 (VPS28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmy04131
]
102939245 (VPS28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmy04147
]
102939245 (VPS28)
Membrane trafficking [BR:
cmy04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
102939245 (VPS28)
Exosome [BR:
cmy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102939245 (VPS28)
Exosomal proteins of other body fluids (saliva and urine)
102939245 (VPS28)
Exosomal proteins of colorectal cancer cells
102939245 (VPS28)
Exosomal proteins of bladder cancer cells
102939245 (VPS28)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
VPS28
Motif
Other DBs
NCBI-GeneID:
102939245
NCBI-ProteinID:
XP_037747756
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All DBs
Position
2:3091499..3097793
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AA seq
221 aa
AA seq
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MFHGIPAAPGLGAPGNKPELYEEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDC
VSPNEYTAACSRLLVQYKAAFKQVQGSEIGSIDEFCRKFRLDCPLAMERIKEDRPITIKD
DKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSHLPPDFEGRQKV
NQWLQTLSGMSASDELDDSQVRQMLFDLESAYNAFNRFLHS
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgttccacgggatccccgccgctccgggtctgggagccccagggaataagccggaactg
tacgaggaggtgaagctgtataagaatgcacgggagcgagaaaagtacgataacatggct
gagctgtttgcagtggtgaagacgatgcaggctctggagaaagcttacatcaaggactgc
gtctctcccaacgagtacactgcagcctgctcccggctcctggtccagtacaaagctgcc
ttcaaacaggtgcagggttccgagatcggctccatcgatgaattctgccgcaagttccgg
cttgactgcccgctggccatggagaggatcaaggaggatcggccaatcaccatcaaggat
gacaaaggcaacctgaaccgctgcattgctgacatcgtctcccttttcatcacggtgatg
gataaactgcgcctggagatccgagctatggatgagatccagccggacctgcgggagctg
atggagacaatgaaccgcatgagccacctgccccctgacttcgaggggcgacagaaagtg
aaccagtggctgcagacgctgagtgggatgtctgcctcggatgagctggatgactcccaa
gtgcgccagatgctgtttgatttggaatcagcctacaacgccttcaaccgcttcctgcac
tcctga
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