Chelonia mydas (green sea turtle): 102939257
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Entry
102939257 CDS
T02989
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04145
Phagosome
cmy04510
Focal adhesion
cmy04512
ECM-receptor interaction
cmy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102939257
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102939257
09144 Cellular community - eukaryotes
04510 Focal adhesion
102939257
09142 Cell motility
04820 Cytoskeleton in muscle cells
102939257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmy04131
]
102939257
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmy04147
]
102939257
00536 Glycosaminoglycan binding proteins [BR:
cmy00536
]
102939257
Membrane trafficking [BR:
cmy04131
]
Endocytosis
Phagocytosis
Opsonins
102939257
Exosome [BR:
cmy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102939257
Exosomal proteins of colorectal cancer cells
102939257
Exosomal proteins of bladder cancer cells
102939257
Glycosaminoglycan binding proteins [BR:
cmy00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102939257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
COMP
EGF_3
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
102939257
NCBI-ProteinID:
XP_027690204
LinkDB
All DBs
Position
25:14336513..14357082
Genome browser
AA seq
766 aa
AA seq
DB search
MISTLAFIFLLSLCCPFASSQTTSVGGDDVGRQMLTEMRETNLALKEVRDLLKQQIKEIT
FLKNTVMECDACGMNTGATGPRITITQFPRCLSNPCFPGVTCTETGSGFRCGPCPLGFTG
NGTHCTDINECSTNPCFPRVNCVNTAPGFHCDPCPPGYTGPAPEGVGLAFARANKQVCTD
INECETDSAKACVPNSICINTRGSYKCGSCKPGFVGDQIIGCRSQTERRCSNGQLSPCHE
KAHCIVERDGTISCVCIVGWAGNGYVCGRDTDIDGFPDEKLRCTDQKCRKDNCVTVPNSG
QEDADRDGIGDACDDDADGDGILNAEDNCVLVRNADQRNTDKDSFGDACDNCRHVKNNDQ
QDSDSDGKGDACDDDIDGDKIKNVVDNCKKTPNPDQKDSDGDGVGDVCDSCPTISNPDQK
DADHDLVGDLCDTNQDRDGDGHQDSQDNCPSVPNSSQLDTDHDGIGDECDDDDDNDGIPD
LRPPGPDNCRLVPNPGQDDSDRDGVGDLCEDDFDKDQVIDRIDVCPENAEVTLTDFRAFQ
TVVLDPEGDAQIDPNWIVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTATDDD
YAGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSKTGPGEYLRNSLW
HTGDTTDQVKLLWKDPRNSGWKDKTSYRWFLQHRPQVGYIRARFYEGPEMVADSGVILDT
TMRGGRLGVFCFSQENIIWSNLRYRCNDTIPEDYETFRTQLDQPTA
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgactctagccttcatttttctcctaagcctctgttgtccttttgcatcaagt
cagacgacaagcgtaggaggagatgatgtcgggcgccagatgctcacagagatgagagaa
actaacctggcactgaaggaagtcagagatttgctgaagcagcagattaaggagatcacg
ttcctgaaaaacacagtcatggagtgtgatgcctgcggcatgaacaccggggcaactggc
ccaaggatcaccataacacaatttcccagatgtttgtcaaacccttgtttccctggagtt
acctgcacagagactggctctggcttccgctgtggaccctgccccctgggcttcacaggc
aacgggacccactgcacagacataaatgagtgcagcacgaatccctgcttcccaagagtc
aactgcgttaacactgcccctggcttccattgtgacccctgtcccccgggctacactggg
ccagcacccgaaggggttgggctagcattcgccagagctaacaaacaggtttgcacagac
atcaatgagtgtgagacagacagcgccaaggcttgcgtcccaaactccatctgcatcaac
acacggggatcctacaagtgcgggtcttgtaagcctggctttgttggggaccagattatt
gggtgccggagccagacggagagacgctgttccaacgggcaactcagtccgtgccatgag
aaagctcactgcattgttgaacgtgatgggaccatctcatgtgtgtgcattgtcgggtgg
gccgggaacggctacgtctgcgggagggacacagacatcgatggattcccggatgagaag
ctgcgctgcacagaccaaaaatgccgcaaggataactgcgtgaccgtccccaactccggc
caggaggacgcggacagggatggcatcggcgacgcgtgtgatgacgacgctgatggagat
gggatattaaatgctgaggacaactgcgtcctcgtgcgcaatgcggaccagcgcaacaca
gacaaggacagcttcggcgacgcctgtgacaactgccggcacgtgaagaacaacgaccag
caggacagcgacagcgacgggaagggagacgcgtgtgacgatgacatagatggagacaag
atcaaaaacgtggtggacaactgtaaaaaaacccccaaccctgatcagaaagacagcgat
ggggacggagtgggggacgtgtgtgacagctgccccaccatcagtaacccagaccagaaa
gatgctgaccatgaccttgtgggggacctgtgtgacaccaaccaggaccgagacggggac
ggccaccaggactcccaggataactgcccctcagtgcccaatagctcccagctggacacg
gaccacgacgggattggagatgaatgtgatgacgacgatgacaatgatgggattccggat
ctaagacctcctggccctgacaactgccggctagtccccaaccctggccaagacgattca
gaccgtgatggtgtgggggatctctgtgaagatgactttgacaaggaccaggtgattgac
agaatcgacgtgtgcccagagaatgcagaggtgactctgacagatttcagggctttccag
acagtcgtgttggaccctgagggcgacgcacagattgaccctaactggattgtcctcaat
cagggcatggaaattgtccagaccatgaacagcgatcctggcctggcagtgggttacact
gcattcaacggggtggatttcgagggcaccttccacgtgaacactgccacagacgacgat
tacgcaggctttatcttcggctaccaggacagctccagtttctacgtggtgatgtggaag
cagatggagcagacgtactggcaggcaaaccccttccgtgcagtagcagagcccggaatt
cagctgaaggcagtgaaatctaaaacagggccaggagaatatctccgtaattccctttgg
cacactggagacactacagaccaggtcaaactgctatggaaagaccccaggaattccggc
tggaaggacaagacctcgtatcgttggttcctacagcaccggcctcaagttggatacatc
agagctcgcttctatgaaggccctgaaatggtagcagacagcggagtcatccttgataca
accatgcgagggggtcgtctgggggtattctgcttctcccaggagaacattatctggtcc
aacctgcgttaccgctgcaatgataccattcctgaagattatgaaacattccgaactcag
ctggaccagcccacagcttaa
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