Chelonia mydas (green sea turtle): 102939271
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Entry
102939271 CDS
T02989
Name
(RefSeq) nucleolar RNA helicase 2 isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmy03009
]
102939271
03036 Chromosome and associated proteins [BR:
cmy03036
]
102939271
Enzymes [BR:
cmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102939271
Ribosome biogenesis [BR:
cmy03009
]
Eukaryotic type
Pre-60S particles
Helicases
102939271
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
102939271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
DD_DDX21-DDX50
ResIII
CMS1
Cas3-like_C_2
AAA_30
ERCC3_RAD25_C
IclR_C
Motif
Other DBs
NCBI-GeneID:
102939271
NCBI-ProteinID:
XP_037760148
LinkDB
All DBs
Position
7:80333057..80362896
Genome browser
AA seq
699 aa
AA seq
DB search
MPEATRLEASSGDEAESPMESGTAPESSRRRRHKKDKKERKSKHHDKSKKRKSRTEENGL
SEDDLEPPKLKKMKERERANGDTGERSPEHKKKSSSLSNGVTPTKTQCNFSEASSGECDS
EPEQELTAEQKEGAFSNFCISKETIELLRARGVTYLFPVQVKTFKHIYDGKDVVAQARTG
TGKTFSFAIPLIEKLQGEMQERKRGRTPKVLVLTPTRELANQVAKDFKDITKTLSVACFY
GGTAYNGQIDLIRSGIDILVGTPGRIKDHLQNGKLDLSKLKHVVLDEVDQMLDMGFAEQV
EDILRVAYKKDSEDNPQTLLFSATCPHWVYDVAKKYMKSRYEQVDLIGKRTQKAAVTVEH
LAIECHWSQRAAVIGDVIQVYSGSHGRTIVFCETKKEANELALNASIKQDCQSLHGDIPQ
KQREITLKGFRNGVFKVLVATNVASRGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGR
TGMCICFYQRKEESQLRHVEQKAGITFKRVGVPTATDIIKASSKDAIRCLDSVPQTAIDY
FKESAQWLIEEKGAVEALAAALAHISGATSIEQRSLLNSDVGFVTMTLQCSEEIDNISYA
WRGLREQLGDEIDRKVNRMCFLKGKMGVCFDIPAVNLRQIQGKWQDSKHWHLTVATQLPE
LAETQREGGRGFYDSRNGRRGGSFNRNRFRNRGQKRSFD
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagccacccggctcgaagccagcagcggggacgaggccgagagccccatggag
agcgggaccgccccggagagcagccgcaggaggaggcacaagaaagataaaaaagagaga
aagtctaaacaccatgataaatccaagaagaggaaatcccgaacagaggaaaatgggctg
tctgaagatgaccttgaacctcccaaacttaaaaagatgaaggagagagagagagcgaat
ggagatactggggaaagaagcccagagcacaagaagaaatcttcctctctaagtaatgga
gtcacccccacaaaaacacagtgtaatttcagtgaagcatcaagtggagagtgtgacagc
gaaccagagcaggaactgactgcagagcagaaggaaggtgctttctccaatttttgtatt
tccaaagaaactattgagcttcttcgagctcgaggtgtaacatacctgtttcctgtgcaa
gtaaagaccttcaagcacatatatgatggcaaagatgttgtagctcaagctcgaactgga
actgggaaaacattctcttttgccattcccttgattgaaaagcttcagggagaaatgcag
gagaggaaaagaggccgcacgccaaaggtgttagttcttactccaactagagagttggca
aaccaggtagccaaagacttcaaggacatcacaaagacactctcagtggcttgtttttat
ggaggaacggcatacaatggacaaattgatctaattcgaagtggcattgacatcttggtt
gggaccccaggtcgaatcaaagaccaccttcagaatggcaagctggatctttccaaactc
aagcatgttgtcctggatgaagttgaccagatgttggacatgggctttgctgaacaagtg
gaggacattttacgagttgcgtacaagaaggattctgaagacaatccccagacattgttg
ttttctgcaacttgtccacattgggtatacgatgtggctaagaaatacatgaaatccaga
tacgaacaggttgaccttatcgggaagaggactcaaaaagctgctgtgactgtagaacat
ttggctatagagtgtcactggtctcaaagagcagcagttattggagatgtcattcaggtt
tacagtggcagtcatggacggaccatagtcttttgtgagacgaaaaaggaggcaaatgaa
ctggccctgaatgcttctattaaacaggattgccagtcgctgcatggtgacattcctcag
aaacaaagggagataactttgaaaggttttagaaatggtgtgtttaaagttctggttgca
actaacgtagcttcccgtggtttagatatccctgaagttgacctggttgtacaaagttca
ccaccgaaggatgtggagtcgtatattcatcgttctgggcgcacaggccgagctggacgg
actgggatgtgtatctgtttttatcagcgaaaggaagaaagtcagctaagacacgtggaa
caaaaagcaggaattacatttaagcgtgtaggtgttcctactgcaacagatataattaag
gcttccagcaaagatgccatcaggtgtttggattctgttcctcaaactgccattgactat
ttcaaagagtcagctcagtggctaatagaggaaaagggggcagttgaagctctggctgca
gcactagcccatatttctggggctacttccattgaacagcgttccttgctcaactcagat
gtgggatttgtaacaatgacattgcaatgctcagaagagatagacaacataagctatgcc
tggcgagggctaagagaacagctgggtgatgaaattgataggaaagtgaacagaatgtgt
tttctcaagggaaaaatgggggtgtgttttgatattcctgcagtgaatcttagacaaata
cagggaaaatggcaggattcaaaacactggcatctgactgtggcaactcaattacccgag
ttagcagaaacccagcgagaaggaggcagaggcttctacgactccaggaatgggaggcga
ggtggcagctttaatagaaacagattcagaaatagaggccagaaacgaagttttgactga
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