Chelonia mydas (green sea turtle): 102939427
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Entry
102939427 CDS
T02989
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102939427 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmy03021
]
102939427 (TAF4B)
03036 Chromosome and associated proteins [BR:
cmy03036
]
102939427 (TAF4B)
Transcription machinery [BR:
cmy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102939427 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
102939427 (TAF4B)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
102939427 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
102939427
NCBI-ProteinID:
XP_037748647
LinkDB
All DBs
Position
2:complement(77743962..77865283)
Genome browser
AA seq
861 aa
AA seq
DB search
MSTSAAAPVRVMPAGHPEQAVAAPAASGAGGAQPAPALLCSQSTVPPASVSAAGAPAGAQ
AVALSHAVTKVPISLVPAVSQQSRVVAAPVGTLVAKVATVTAAQQPPKNSGGPRLAAPQT
VAPKAPQTTTIQLPANFQIPPGTVLIRSNSGQLMLVSQQAIARAQSQSQNNTGARPSIPT
STPSVRICTVQNTGTHLVKKVVTPPLKTVSQATNSVASTDQRPAIVQPAAATNSVTTVTA
VKPPGTGTPVKLPVTGPPAPSVSQKPISVKEEGTTVAQPNTSTEMLENVKKCKNFLATLI
KLASSGPQAPEMGQNVKNLVQHLLEAKIEPEEFTKKLYVELKSSPQPYLVPFLKKSMLAL
RQLMPNAQSFIQQCIQQQATTQAAVSTCVSAAPTSSTVVTTSALAKTSVQPIKPVPASAV
VTGSQTVKPVPSTLVTAAAASLQTVKPVTAPLHPANPVPTSAVATTSLQAVKPVFASAVA
TTTTTPLQPVKSVIGTPISIKITQPNSIVAQSVHAQQTVRVKQLVVQQPSGGIVKQVATL
PQTATLTLQKPGEKRMPLNALIQTNQFPAGSFLKQITLPGNKILSLQASPVQKNKIKENG
TTSFRDEDDINDVTSMAGVNLSEENACILATNSEVVGTLIRSCADEPFLSSEALQKKILD
IGKRHDIMEPNSDVVNLISHATQERLRGLLEKLTVIAQHRMTTYKESNKYIISSDTRAQL
RFLEKLDHMEKQRKDEEEREMLLRAAKSRSNKEDPEQLRLKQKAKEMQQLELAQMQQREA
NLTALAAIGPRKKRPLDSPNLGSGLEGLNGTAVASGSSGVSLTKQLFRPRITRVCLRDLI
FCMEQEREMKRSLALYRALLK
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctctgcggcagccccggtgcgggtgatgcccgccgggcaccctgagcaggca
gtggcggctcctgcagcgagcggggccggtggggctcagccggcacctgccctgctctgc
tctcagagcacggtgccccctgcctctgtctccgcggctggcgctcccgcgggggcccaa
gcagttgccttgagccacgcagtgactaaggttcccatcagcctggtgcctgccgtttcc
cagcagtcacgggtggtggctgcccccgtggggacgctggtggctaaagtggccactgtc
accgctgcccagcagccacccaagaactctggtgggcctaggctggctgctccgcagacc
gtggctcccaaagccccccagaccactacaatacaactgcctgcaaacttccagatccca
ccaggtacagttcttatcagaagtaacagtggtcaattaatgttagtatctcaacaagca
atagctcgagcacagagccagtcacaaaataacacaggtgcaagaccatcaatacctacc
agcacaccctcagtcagaatatgtactgtacagaacactggcacccatttagtaaaaaaa
gtagtaactcctcctctgaaaacagtatctcaagcaacaaattcagttgcatctactgat
caaagacctgctatagtacagccagcagctgcaactaacagtgttacgacagttactgct
gttaaacctccaggtactggaacacctgtaaagcttccagtcacaggacctcctgcacca
tctgtctcccaaaagccaatctctgtcaaagaagagggcacaacagtagcacagcccaac
acttccacagaaatgctagagaatgtgaagaaatgcaagaattttcttgcaacgttaata
aagctggcatctagtggacctcaagccccagaaatgggacagaatgtgaagaatctggta
caacatttattggaagcaaaaattgaaccagaagaatttacaaaaaagctgtatgttgaa
ctcaagtcttctccgcaaccatatctagttcctttcctcaagaaaagtatgcttgcctta
cggcagctaatgcccaatgcccagagttttatccagcagtgtattcagcagcaggctaca
acacaagcagctgtttctacctgtgtctctgcagcaccaacttcctccacagtagtgacc
acctcagctctggcaaaaacttctgttcagcccataaaaccagtccctgcttctgccgtg
gtcacaggctctcagactgtaaaacctgtcccctccacattggtgacagcagcagcagct
tccctccagactgtgaaaccagtgacagcccctcttcatcctgcaaatccagtccccacg
tctgcagtggcaacaacctctctccaggctgtgaaacctgtctttgcatctgcagtggcg
accacaacgacaacccctcttcagcctgtgaaatcagtcattgggacacctatcagtatt
aaaattacccagccgaactctattgtggcacagtcagttcatgctcaacagacagttaga
gtgaaacagctggtagtccagcagccatcaggaggcattgttaaacaagtggccacgctt
ccacaaacagcaacactgactctccagaaacctggcgaaaaaaggatgccattaaacgca
ctaattcagactaatcagtttcctgcaggttcctttctgaaacaaattacactgccagga
aacaaaattctgtcgcttcaagcatctcctgttcagaaaaataaaataaaagagaatgga
acaacatccttcagagacgaagatgacatcaatgatgtgacttctatggctggggtcaac
ctgagtgaagagaatgcatgcatattggcaacaaattctgaagtggtcggtacactgatc
cgatcttgtgcagatgaaccatttctctcctcagaggctttgcaaaagaagatcttagac
ataggtaaaaggcatgacattatggaacctaactctgatgttgtgaacttgatctcccat
gctacacaggagagattacgagggctcctagaaaaactgactgtaattgctcagcatcga
atgacaacctataaggagagtaataagtatatcatatctagtgacaccagagcacaactt
agatttcttgagaaactggatcacatggaaaaacagagaaaggatgaagaggaacgagaa
atgcttttacgagcagccaagagtcgttccaataaagaagatccagaacagctgcgatta
aagcagaaagcaaaagagatgcaacagttggagctggcacagatgcaacaaagagaagcc
aatctcacagctttggcagcgattgggccaaggaaaaaaagaccactggattcaccaaat
cttggatctgggcttgagggcttgaatggcactgcagttgcttctggatcatctggtgtt
agtcttacaaaacagttgtttcgtccaagaataacacgtgtctgtctcagggacttgata
ttctgcatggaacaagagagggagatgaagcgttctctagccttgtaccgtgctcttctc
aagtga
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