Chelonia mydas (green sea turtle): 102939452
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Entry
102939452 CDS
T02989
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50 isoform X2
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmy04121
]
102939452 (TRIM50)
Ubiquitin system [BR:
cmy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102939452 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-B_box
PRY
zf-RING_UBOX
zf-C3HC4_4
TRIM_CC
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
zf-RING_2
U-box
zf-RING_10
Sina_RING
Trimer_CC
zf-Nse
zf-RING_6
ING
DUF677
Motif
Other DBs
NCBI-GeneID:
102939452
NCBI-ProteinID:
XP_007065514
UniProt:
M7B4U6
LinkDB
All DBs
Position
17
Genome browser
AA seq
496 aa
AA seq
DB search
MARKMSVCELEDQLLCPICLEVLKEPLMLQCGHSFCKSCVGSLMCNLDQQLLCPVCRQAV
DCSTLLPNVTLACVIEALRTMGDSDPNQESCPVHHNPLSLFCEQDQEVICGLCGIIGAHR
QHKIMPVSTVYSRMKEELSVLITEVQQHKRKLDEHISKLVNNKTRIANESDVFKWVIRKE
FQELHRYIDEEKASFLESIERKAGHLIASIESQVTQTSDTLHKLQEMESSLEKLSNESQL
DFIRNYGSFPSRSEFLPQHPAEGTFSAISFKPGFHQDDIKMTVWKRLLRRVLPAPETLKL
DPVTGHPLLELTKDNTVVQSRLLYQRRGSNPERFDSSNCILTNKGFSWGKHYWEVIVGTK
SHWRLGIIKGTASRKGKLNKSPEHGVWLIGLKEGKVYEAFNNPRTTLPLTARPQRIGIYL
HYEKGELTFYNADSPDELIPIYTFRAEFQGKLYPILDMCWHERGTNALPIVLPTATMIRH
TQAPDSSLDPPEPTKL
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggctcggaagatgagtgtctgtgagctggaggaccagttgctctgccccatttgcctg
gaggtcttaaaggagcccctgatgctccagtgtgggcactccttctgcaagtcctgcgtg
gggtccctcatgtgcaacctggaccagcagctcctgtgccccgtgtgccgccaagctgtg
gactgcagcaccttgctgcccaacgtcacgctggcctgcgtcatcgaggcgctgcggacc
atgggcgattcagatcccaaccaggagtcctgccctgtccaccacaaccccctcagcctc
ttctgcgagcaggaccaagaggtgatctgtgggctttgcggcatcattggggctcaccgt
cagcataagatcatgcctgtctctaccgtgtacagccggatgaaggaggagctttcagtg
ctaataacggaggtccagcaacacaagaggaagctggatgagcacatcagcaagctggtt
aacaataaaacccggatcgcaaatgagtcagacgtcttcaagtgggtgatccggaaggag
ttccaggagttgcaccgatacattgacgaggagaaggccagcttcctggagagcattgag
aggaaggctggccacctcattgcctccattgagtcccaggtcacgcagacgtcagacacc
ctccacaagctgcaggagatggagagctcgctggagaaactcagtaatgaaagtcagctg
gatttcatccggaactacggctcgttcccctccaggtcagagtttctcccccagcaccca
gctgaagggaccttcagcgccatctcctttaagccaggtttccaccaagatgacatcaag
atgacagtatggaaacgtctgctccgcagagtcctgccagccccagagacactgaagctg
gacccggtgacaggacatcctctgctggagctgaccaaggacaacactgtggtgcagagc
aggctgctctaccagcgccggggcagcaatcctgagcgctttgactccagcaactgcatc
ctcaccaacaagggcttctcctggggcaagcactactgggaggtgatcgtaggcaccaag
agccactggcgcctgggcatcatcaagggcacagctagccgcaagggcaagctgaacaag
tctcctgagcatggcgtgtggctcattggcctgaaggaaggaaaggtctacgaggccttc
aacaacccccgcaccacgctgccgcttacggcccggccccagcgcatcggcatctacctg
cactatgagaagggtgagctgaccttctacaatgccgacagccccgatgagctcatcccc
atttacaccttccgggcggagttccagggcaagctctaccccatcctagacatgtgctgg
cacgagcggggcaccaacgccctgcccattgtgctgcccacggccaccatgattcgacac
acacaagctcctgacagcagcctggacccaccggagcccacaaaactatag
DBGET
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