KEGG   Chelonia mydas (green sea turtle): 102939516
Entry
102939516         CDS       T02989                                 
Symbol
TSC1
Name
(RefSeq) hamartin isoform X2
  KO
K07206  tuberous sclerosis 1
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy04140  Autophagy - animal
cmy04150  mTOR signaling pathway
cmy04218  Cellular senescence
cmy04910  Insulin signaling pathway
cmy05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    102939516 (TSC1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    102939516 (TSC1)
  09143 Cell growth and death
   04218 Cellular senescence
    102939516 (TSC1)
 09150 Organismal Systems
  09152 Endocrine system
   04910 Insulin signaling pathway
    102939516 (TSC1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102939516 (TSC1)
SSDB
Motif
Pfam: Hamartin Tegument_dsDNA
Other DBs
NCBI-GeneID: 102939516
NCBI-ProteinID: XP_007061092
LinkDB
Position
16:complement(16004509..16064715)
AA seq 1169 aa
MAQQANIGELLSMLDSSVLLVQEDITAVFKDNLNSDRGPMLVNMLVDYYLENNSQQALQI
LSTLQEPHDKHLLDKINEYMGKAATRLHTLSLLGHVIRRQPSWKHKLSQAPLLLSLLKCL
KTDTDVVVLTTGVLVLITMLPMIPQSGKMYLHDFFGIFGRLSSWCLKNPGHVAEIYLVHL
HASVYALFHRLYGMYPCNFVSFLRSHYSMKENLETFEEVVKPMMEHVRIHPELVTGSKDH
ELDPRRWKRLETHDVVIECAKISLDPKEASYEDSYYSVSQPVSICLQPRQTDPNASPYID
THSSYGTSTSTPYSTPRLTLLQMQGQLRPILSPQSSRLSAEPQQVTIWSPSAVCGMTTPP
TSPGIVSSESSQTSSQPYSKYFSTPGGKGTPLGTPATSPPPPCISDDFVHVSLPPAAATP
LKKEDKPDPGRPSLSRQQNVINSEKALEVPGSKSSVNLSDLPEFLGCLASDEDSVEKDRE
EDAISKEISEITTADAEPVVPRGGFDSPFYRTSESLPASQRKPHSVASSVQGHSLNSEPL
ASSLDKSGPEGARDTPKQAFTPIDRPCGASHESPAGNRVGQSSMETSILTPSPCKVSAQR
RMGFGSGQRPSYEHLFEVALPKTAYLFVSKKTEELRKKFKGNQEEDCTSSTSPMEVLDRL
IQQGADAHTKELNKLPLPSKSADWTHFGGSPPSDEIHTLRNQLLLLHNQLLYERFKRQQH
ALRNRRLLRKVIKATALEEHNAAMKDQLKLQEKDIQSLKLSLQKEQARYHQFQEEHDNIV
AQLHSQIRQLQHDREEFYNQSQELQTKLKDCRNMIADLRVELKKANNKVCHTELLLSQVS
QKLSNSESVQQQMEFLNRQLLVLGEVNELYLEQLQHKHADTTKEVEMMQAAFRKELEKAK
FCVQQQSQRLDASQKRIVELESQLSKKDHLLLEQKKYLEDVKIQARGQLQAVESRYKAQK
RITQAFELEILDLYGRWEKDSLLKKLDDEKTEAAEAAEERLDCSNEGFADSVAGYSEEAI
GRNGETKPPSTRGSSSSKGGSSSSELSTPEKSQNQRMGQFSSRWEASMLLEPSTSVPLTV
GSLPSSKSFLGMKVRELFRNKSESQCDEESMTINSLSDTLKSELCKDPSMVEAKAPSSPD
NPSPSPMNQESSVGQLHIMDYNETHHDHS
NT seq 3510 nt   +upstreamnt  +downstreamnt
atggcccagcaagcaaatattggtgagctcctctctatgttggattcttcagttctgctt
gtccaggaagatataacagctgtcttcaaagataacctcaactctgaccgtggaccgatg
cttgtgaatatgctagtagattactacttggaaaacaattctcagcaggcattgcagatc
ctgtccacattgcaagagcctcatgacaagcacctactggacaaaattaatgaatatatg
ggcaaagctgctacccgtttacatactctctcactgctgggtcatgtgataagacgacag
ccatcttggaaacataaactttctcaagcacctctcctgctttctttacttaagtgtctt
aagactgacacagatgtagtagtactcaccactggtgtcctagtgttaataaccatgctg
ccaatgattccacagtctggcaaaatgtaccttcatgatttctttggtatatttggccgt
ctctcatcctggtgcttgaagaatccaggtcatgtggcagagatctatctcgtccatctc
catgccagtgtttatgcactctttcaccgcctttatggaatgtatccttgcaactttgtc
tcctttctgcgctctcactacagtatgaaggaaaacttggagacttttgaagaggtggtc
aagccaatgatggaacatgtacgaattcatccagaattagtgactggatccaaggaccat
gaactggacccacgaaggtggaaaagactagaaactcatgatgttgtgatagaatgtgcc
aaaatctccctggacccaaaagaagcctcatatgaagacagctattattctgtgtcacag
ccagtcagcatatgcttgcagcctcgtcaaactgaccccaatgccagtccttacattgac
acacacagcagctatgggacttccacttctaccccttattccactcctaggctaacccta
ttacaaatgcaagggcagctacgtccgattctgagcccacagtcttcgcggctgtcagct
gagccacagcaggttaccatctggagcccctctgcagtttgtggtatgaccactccacca
acctctccaggaattgtctcgtcagagtcctcacaaacttcatcacagccttatagcaaa
tattttagcacacctggtggaaaaggaacccctctaggaacaccagccacctcccctcct
ccaccctgcatttcagatgactttgtgcacgtttcactccctccagctgctgccacacct
ctcaagaaggaggacaaaccggatcccgggaggccttcgctgtcccgacagcaaaatgtc
ataaacagcgagaaagcattggaagtgcctggcagtaaaagttctgtaaatttaagtgat
cttccagaatttttaggttgcctggcctctgatgaagatagtgttgagaaggacagagaa
gaagatgcaatatcaaaagagatttctgagatcactacagcagatgctgagcccgtggtg
cctagaggaggatttgactctcctttttaccgcacaagtgagagtctaccagcctctcaa
aggaagccccattcagtagcctccagtgttcaaggacacagtctgaactctgaaccgtta
gcctcgtctctggacaaatctgggcctgagggtgcacgagacacacctaaacaagcattt
actcccattgacagaccctgtggagcctctcatgaaagccctgctggtaacagggtaggc
caatcctctatggagaccagtatcctcactcccagcccttgcaaagtatcagcacagaga
agaatggggtttgggagcgggcagcgtccctcatatgagcacctttttgaggttgcatta
ccaaagactgcctacctctttgttagtaagaaaactgaggaactgcgaaagaaattcaag
ggaaaccaggaagaagactgcacatcctccacctctccaatggaagtactggatagactg
atacagcaaggagcagatgcacataccaaggagctcaacaaattgcctctgccaagcaaa
tctgctgactggactcactttggaggttctcccccttcagatgagattcacaccctgcgt
aaccagctgcttttgctacacaaccagttattgtacgagcgcttcaaaaggcaacaacat
gcccttcggaaccggcgactcctgcggaaagtgatcaaagcaacagcactggaggaacat
aatgctgccatgaaagatcagctgaaactacaggagaaagatatccagtccttgaagctt
agtctgcagaaagagcaggccaggtaccaccagtttcaggaagaacatgataatatagtg
gctcagcttcacagccagatccgacagctgcaacatgacagggaagaattctacaaccag
agccaggaattgcagaccaagctgaaggactgtaggaatatgattgcagatttgagggta
gaattaaagaaagccaacaacaaggtgtgtcacacagagttgcttctcagccaagtttct
cagaagctttccaacagcgagtcagtccagcagcagatggagttcttgaataggcaactt
ctggttcttggggaggtcaatgagctgtacttggaacagctgcagcacaagcatgcagac
acaacgaaggaagtggaaatgatgcaggctgcttttcggaaagaactggagaaagcaaaa
ttctgtgttcagcagcaaagccagaggcttgatgcctcccagaagcggatagttgaactg
gagtctcagctttctaagaaagatcacctgttactggagcaaaagaagtatctggaggat
gtcaaaatccaagcaagaggccagctgcaagcggtagagagcagatacaaagcccagaaa
agaattacacaagcatttgagctggagattttagatctgtatggccgatgggagaaggat
agcctattgaaaaaacttgacgatgaaaaaacagaagcagctgaagcagcagaagaaagg
ttggattgtagtaatgaaggatttgcagactctgtggcaggatacagtgaagaagcaatt
ggtagaaatggagagaccaaacctccgagcacccggggtagtagtagcagtaaaggcggc
agcagcagtagtgagctgtccaccccagaaaaatcccagaaccagagaatgggtcagttc
agcagtcgctgggaagcatccatgttgctggagccttccactagtgtcccactaactgta
ggctcactccccagctccaagagctttcttggaatgaaggtgcgtgaattattccgcaac
aagagtgagagccagtgtgatgaggagagtatgaccatcaacagtctttctgacactcta
aagagtgaactatgtaaagatccaagcatggtggaggcaaaggctccttcaagccctgac
aaccccagtccctcgcccatgaaccaggaaagcagtgttggacagcttcatatcatggac
tacaatgaaactcatcatgaccacagttaa

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