Chelonia mydas (green sea turtle): 102939554
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Entry
102939554 CDS
T02989
Symbol
ABCA3
Name
(RefSeq) phospholipid-transporting ATPase ABCA3 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102939554 (ABCA3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmy02000
]
102939554 (ABCA3)
Transporters [BR:
cmy02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102939554 (ABCA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_22
RsgA_GTPase
AAA_23
DrrA1-3_C
AAA_30
AAA_29
Motif
Other DBs
NCBI-GeneID:
102939554
NCBI-ProteinID:
XP_037766354
LinkDB
All DBs
Position
10:complement(35404908..35494349)
Genome browser
AA seq
1707 aa
AA seq
DB search
MVVLRQFGLLLWKNYILQKRQILVTVIEMCLPLLFAAILIALRNRVHSISHPNATIYPSQ
SVDELPWFFHHRKLNPWELAYIPSNSTAVKSIAEAVEKALHINIKAQGFPSEREFEDYVK
FDNRSGNVLAALVFKHCFNQSKDPLPLQVNYQLRFKYSPRNAPRNEQTGLNPNLDRDWHT
SYLFPLFQLPGPREAKLPDGGTPGYIREGFLAVQHAVDRAIMQYHANTSTTRLLEGVTVA
VRRFPYPPYVNDLFLLAIQNQLPLLLMLSFTYTSLNIVRAVVHEKEKKLKEYMRMMGLSN
WLHWSAWFLMFFLFLLVSIFFVTVLFCVKVSQQGAVLTNSDPTLVFTFLVVFSISSISFS
FMVSTFFSRANVAAAAGGFLYFFSYIPYFFISPRYDLMSHSQKLSSCLISNVAMAMGAQL
IGMFEGKGTGIQWQDLMKPVSVDDNFTFAQVLGMLLLDSVLYGLVAWYVEAVFPGEYGMP
QPWYFFLMPSYWCRTPRTVLGKEKEDEEDPEKALKSQYIEEEPADLVSGIKIKHLSKVFK
VGSKTKEAVRNLTLNMYEGQITVLLGHNGAGKTTTLSMLTGLYPPTSGQAYINGYEISQD
MVLIRRSLGLCPQHDVLFDNMTVAEHLYFYSALKGYPSLKCPEEIDRIVRLLNLEEKRCS
LSKALSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPASRRATWDLLQHQRSSRTILLTT
HFMDEADLLGDRIAIMAQGELQCCGSSLFLKHKYGAGYHMVMVKEPYCNLGEISRLICQY
VPNASLESNAGAELSFILPTESTHRFEALFTELEQKREELGIASYGASVTTMEEVFLRVG
KLVDSSMDIQAIQLPALQYQHERRSNDWAMDDSSSLSGMTDMTDDSGALITEDCSSIKLN
TGFYLCCQQFYAMFMKRAVYSWRNWKMVVAQFLVPLIFTTLALVVAKTFPGPRDSALLRL
TLDPYGKTVVPFSVSEASRISPRLAEQFAVLLDAQGQVPLEVLGDLEEYLISRAAEEGGT
FNERYIAAASFGEVKNRTVVTALFNNQAYHASATALMLADNALFRLLAGPNASITVTNYP
QPRNITETAKDQLMEGQTGFAIAINLLYGMASLSSTFALLLVSERAIKAKHVQFVSGVYV
ANFWLSALLWDLINFLIPCALMLVIFQAFDVKAFTQDSHLVDVMLIFLLYGWAIIPLMYL
LSFFFSAAATAYTRLTIFNIFSGTTTFLTVTIMSIPELGLVDLSKTLDKIFLILPNYCLG
QCISDFYQNYEFIQFCTSSIEANIICKAFNISYQTNYFSWETPGIGQYLTSLSVQGTVFL
LLLFLIETNLLWRVRTFICSISRRRKWAMLLNRIPVLPEDRDVADERKKVLESPPELLSS
LSSPLVIKELTKVYNSSESLLAVDRISLAVNKGECFGLLGFNGAGKTTTFKMLTGDESIT
SGDAYVDGHSILANIKKVQQRIGYCPQFDALLDHMTGRETLSLYARLRGIPERYIGSCVE
NMLRGLLLEPHADKLVRSYSGGNKRKLSAGVALIGGPPVIFMDEPSTGMDPVARRLLWDA
VTRTRECGKSIIITSHSMEECEALCTRLAIMVNGQFKCLGSPQHLKSKFGSGYTLLAKTR
AEEEGDMQVFKAFVEKMFPGSVLKHEHQGMVHYHLTNKNLSWAQVFGALERAKEKFHVED
YSVSQISLEQVFMSFTRFQHCTEERGK
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtgttaaggcagtttgggttgcttctctggaagaactacattttgcagaagcga
cagattttggtaacggtcatagaaatgtgcttgccgttgctgtttgccgcaatcctcatt
gcgctccgcaacagagtgcattcgatcagccaccccaatgccaccatctaccccagccag
tcagtggacgagctgccatggtttttccatcaccggaagctcaacccctgggagctagct
tacatcccctccaacagcactgctgtgaagagcatcgcggaggcagtggaaaaggcgttg
cacatcaatatcaaagctcaagggttcccttcggagagggagtttgaggactacgtgaag
tttgataaccgctcgggtaatgtgctagccgcccttgttttcaaacattgcttcaatcag
agcaaggaccccttgccgctgcaggttaattatcagctgcgcttcaaatatagccctcgg
aatgccccccggaacgagcagacaggcttgaaccccaacctcgaccgtgactggcacacc
agctacctgttcccacttttccagttaccaggccccagagaagccaagctccctgatgga
gggactccaggttacatccgggaagggttcctggccgtgcagcacgctgtggacagagcc
atcatgcaataccatgccaacacctctaccacccgcctgctggagggggtcactgtggcc
gttcggcgcttcccctacccaccatacgtcaatgacctcttcctactggccatccagaac
cagctgcccctgctgctcatgctgagcttcacctatacctcgctcaacatcgtccgtgcc
gttgtgcacgagaaggagaaaaagttgaaggagtacatgcgaatgatgggcctcagtaac
tggctgcactggagcgcctggttcctcatgttcttcctcttcctcctggtgtccatcttc
ttcgtcacggtgcttttctgtgtcaaggtaagccagcagggggcggtactcaccaacagt
gacccaaccctggtgttcaccttcctggtggtcttctccatctcctccatctccttcagc
ttcatggtcagcactttcttctccagagcaaatgtggcagctgccgctgggggtttcctt
tactttttctcctatatcccctacttctttatctcacctcgctacgacctgatgtcccac
agtcagaagctgtcgtcctgcctcatctccaatgttgccatggccatgggggcacagctg
ataggcatgtttgaaggaaaagggaccggcattcagtggcaggacctcatgaagccagtc
agcgtggatgataacttcacctttgcacaggtgctggggatgctgctgttggactctgtc
ctctatggcctggtggcctggtacgtggaggccgtcttcccaggggagtatggcatgccg
cagccgtggtacttcttcttgatgccctcgtactggtgcaggactcccagaaccgtcctg
gggaaagagaaggaggacgaggaggacccggagaaggcactgaaaagccagtacattgag
gaagagcctgccgatctggtgtcagggatcaaaataaagcacctttccaaggtgttcaaa
gtggggagcaagaccaaggaggcagtaaggaacttgaccctgaacatgtatgaggggcag
atcactgtccttctgggacacaacggtgccgggaagacaaccaccctgtccatgctcaca
ggtctgtatcctcccacgagcggccaggcttacatcaacggctacgagatctcccaggac
atggttctgatccgaaggagtctgggtctgtgtccccagcacgatgttctgtttgacaac
atgacagtggcggagcacctgtacttctactctgcgctgaagggctacccctcgctgaag
tgcccggaggagatagaccgtatcgtgaggctgctgaacctggaggagaagcgctgctct
ctgtcaaaggccttgtccgggggcatgaaacgcaagctgtccatcggcatcgcactcatc
ggggactccaaggtggtgatgctggatgagccgacatcaggaatggacccagcctcccgc
agggccacctgggacctcctccagcaccagaggagcagccgtaccatcctgctgaccacc
cacttcatggacgaagcagacctgcttggagaccgcatcgccatcatggcccagggcgag
ctgcaatgctgcgggtcctcgctcttcctcaagcacaaatatggtgccggctaccacatg
gtgatggtgaaggagccgtactgtaacctaggggagatctcccgcctcatttgtcagtat
gtgcccaatgccagcctggagagcaatgctggggccgagctgtccttcattctgcccaca
gagagcacacacaggtttgaggcactgttcacggagctggagcagaaacgggaggagttg
gggatcgctagctatggtgcatctgtcaccactatggaggaggtcttcctcagggttggc
aagctggtggactccagcatggatatccaagccatccaactccctgccctgcagtaccag
cacgagaggcggtccaacgactgggccatggatgactccagcagcctgagtggaatgact
gacatgactgatgatagtggggctctgatcacggaggattgctccagtatcaaactgaac
acggggttctacctgtgctgccagcagttctatgccatgttcatgaagagggcagtgtac
agctggcgcaactggaagatggtggtagcgcagttcctggtgccgctgattttcacaacc
cttgctctggttgttgccaagaccttccccgggccgagagattctgcgctgctcaggctg
acgctggacccgtatggcaagactgtcgtgcctttctctgtctctgaggcatccaggatc
tccccaaggctggcagaacagtttgcagtgctactggatgctcagggccaagtgcccctg
gaggtgctaggtgacctggaggagtacctgatctcccgagcggcggaggagggcggaact
ttcaacgaacgctacatcgcagctgcttccttcggagaggtcaaaaaccgcacggtggtc
acggcgctgttcaacaaccaggcgtatcatgcctccgccactgcactgatgctggcagac
aacgccctgttccggctgctggctggacccaatgcttccatcactgtcaccaactatccc
cagccccggaacatcaccgagacggcgaaggaccaactcatggaaggccagactgggttc
gccattgctattaacttgctctatgggatggcttccttgtccagcaccttcgcgctcctg
ctggtcagcgagagagccatcaaggccaagcacgtgcagtttgtcagcggggtctatgtg
gccaatttttggctctcggccctgctttgggacctcatcaacttcctcattccctgtgcg
ttgatgctggtgatattccaagccttcgatgtgaaagctttcacccaggacagccacctc
gtcgatgtgatgctgatcttcctgctctacggctgggccatcatccccctcatgtacctg
ctcagcttcttcttttcagcggcagctacagcctacacgcgcctcaccatcttcaacatc
ttctcgggcacgaccaccttcctcacagtcacgatcatgagcattccagagctgggcctc
gtggacctgtccaaaaccctggataaaatcttcctgattttgcccaactactgcttgggc
cagtgcatcagtgacttctaccagaactacgagttcattcagttttgcacctcttccatc
gaagccaacatcatctgcaaagcattcaatatcagttaccagacgaattacttctcatgg
gagactccagggattgggcaatatctgacctccctgagtgtccagggaaccgtcttcctc
ctcctcctcttcctcattgaaactaacctcctctggagagtgaggaccttcatctgcagc
atcagtaggaggcggaaatgggcaatgctgctgaacaggatccctgtgctgccggaagac
agggatgtggcagatgagagaaagaaagttttggagtccccgccagagctgctgtcatcg
ctgagcagcccgttggtcatcaaggagctcaccaaggtgtataacagcagtgagtccctg
ctagctgtggacagaatctctctggcggtcaacaaaggggagtgcttcggcctgctgggc
ttcaatggagccggcaaaaccaccaccttcaaaatgctgacgggcgacgagagcatcacc
tcgggggatgcctacgtggacggccacagcattctggccaacatcaaaaaggtccagcag
cggattggctactgccctcagtttgatgccctgttggatcacatgacggggcgggagaca
ctgagcctgtatgcccggcttcgggggattcccgagcgctacatcggcagctgcgtggag
aacatgttgcgagggctgctcttggagccccacgcggacaagctagtgaggtcctacagc
ggtggcaacaagcggaagctgagcgctggcgttgccctgatcggcgggcctccagtgatc
ttcatggatgagccctccactggcatggaccctgtggcccggcgcctgctctgggatgcc
gtgaccaggacacgggaatgcgggaaatccatcatcatcacctcccacagcatggaagag
tgtgaggccttgtgcaccaggctggccatcatggtgaacgggcagttcaaatgcctgggc
agcccccagcacctgaagagcaagttcggcagcggatacaccctgctggcaaaaaccagg
gccgaggaggagggcgacatgcaggtgttcaaggcctttgtggagaagatgtttccaggg
agcgtcctgaagcacgagcaccaaggcatggtccattatcacttgaccaacaagaacctc
agctgggcacaggtcttcggggcgctggagagagccaaagagaagttccacgtggaggat
tattctgtcagccagatctccctggagcaggtcttcatgagcttcacccgcttccagcac
tgcacagaggagcgagggaaatga
DBGET
integrated database retrieval system
