Chelonia mydas (green sea turtle): 102939608
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Entry
102939608 CDS
T02989
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmy03036
]
102939608 (SMARCAL1)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102939608 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
Flavi_DEAD
AAA_22
TK
AAA_lid_7
Motif
Other DBs
NCBI-GeneID:
102939608
NCBI-ProteinID:
XP_037768100
LinkDB
All DBs
Position
11:complement(4496339..4555788)
Genome browser
AA seq
983 aa
AA seq
DB search
MSSGLTEEQKRKIEENRQKALARRAERLAAQQGGPGGLTSQQSNQQNPSYRRNLEHQCMK
QENNHVRFISQHQQTPNSHVAQKSYVHKGYNHFNAPQQMAGSCGVQQENCSEGSKQDSWS
QMCSTEQSFPILQNSLSPHQHDSGSEQPKYHATFKKPTEPSHPRLTAKEHPDDDKRLQSL
NRSASGHVGMKYMPSPSSATLSDSEMSTNAGKPTCGPFPQKDSISQFCGTMRPPTPLKEG
KMQKVASSSGVGSNLEIFCHRKVPSVIKGRCVKHSEDRFQVEVGYNAELIAVFKSIPSKR
YDPAMKIWNFGLEDYRSLMEAVKPLSSVTLVPFEEMDAAGPATCSQSVGSRPSLKSFLKT
CSGWKKPSATIRGKCVLISRSRFEVEIGYAAEIIEVFKQMNSRNYDMKTRKWSFLLEDYA
RLMEAVQRLSTVEVEPLPKPVIQAFGPQFDEPAFHVSDIPEADLSVVDSKIVMSLMPFQR
EGVNFAISREGRLLLADDMGLGKTIQAICIAAYYRKEWPLLVVTPSSVRFTWAEAFHRWL
PSLSPESTNVILTGKDNLSAKLVNIISFDLLSKMEKQLKDTFQVVIIDESHFLKNTKTAR
CRAAMPLLKAAKRVILLSGTPAVSRPAELYTQIAAVRPTFFPQFHSFGLRYCDAKKMPWG
WDYSRSSNLGELKLLLEESVMIRRLKSDVLSQLPAKQRKMVVVAPEGMNAKTKAELAAAA
KDMVKGYRTKQQEKEALLLFYNRTAEAKIRSVIEYILDLVESGRDKFLVFAHHRIVLNAI
SKELENKHIGYIRIDGTTPSAERQSLCQKFQFSEKHSVAVLSLTAANMGLTLSSADLVVF
AELFWNPGVLIQAEDRAHRIGQTSSVNVHYLVAKGTADDYLWPMIQEKIKVLGEAGLSEA
SFSETAEATDYFYKRDPKQQTIYSLFQRTFSEQGDNLDEALLVEAADACQGSDSRSASQD
AGADTCSASPCKKQRLEDYFHRQ
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctggccttacggaagaacagaaaagaaaaattgaggagaacagacagaaggcc
ttggctagaagagcagagagactagcagcccagcaaggagggcctggtgggctcactagc
caacaatccaaccagcagaatccaagctatcgaagaaacctggagcatcagtgtatgaaa
caagaaaacaatcatgttaggttcattagccaacaccagcagacacccaacagccatgtg
gcgcagaagagctatgttcataaaggatataatcactttaacgcaccccagcagatggct
ggttcatgtggcgtgcaacaggagaattgttcagagggctcaaagcaagattcgtggagt
caaatgtgcagcactgaacagtccttcccgatactccagaattctttgagtccccatcaa
catgattcaggttctgagcaacccaagtaccacgcaacattcaaaaaacctacagaacct
tctcatcctagattaactgctaaggagcaccctgatgatgataaacgtttacaaagtctg
aacagatctgccagtggacatgttggcatgaaatacatgccatcaccgagcagtgctacc
ttgagtgattctgaaatgtcaacaaatgcagggaaaccaacctgtgggcccttcccccaa
aaggatagcatctcacagttttgtggcactatgcggccacccactccgttgaaggagggt
aagatgcaaaaggtggccagttctagtggtgtaggctctaacttggaaatattttgtcat
agaaaagtacccagtgttatcaaaggaaggtgcgtgaagcacagtgaagaccgattccag
gttgaagtaggctacaatgcagaactcatcgctgtgtttaagagcatacctagcaaaaga
tatgatcctgctatgaagatttggaattttggtttagaagactacagaagtctcatggaa
gcagtgaagccgctttcctcagtgactttggtaccatttgaagagatggacgcagctggc
ccagccacgtgttcacagtctgtcggcagcaggcccagcttgaaatccttcttaaagaca
tgcagtggctggaagaaaccctctgccaccatccgggggaagtgtgttctgatctcacgc
tcccggtttgaggttgagattgggtatgctgcagaaattattgaagtgtttaaacagatg
aattccaggaattatgacatgaagaccagaaaatggagtttcctactggaggactacgca
aggctaatggaagctgtacagcgcctttcgacggtagaggtggaaccgctgcccaagcca
gtaatacaagcctttggtcctcagtttgacgagcccgcctttcatgtctcagacattccc
gaagctgacctttcagtggtggattccaaaattgtgatgagcctcatgccctttcagaga
gaaggcgtgaattttgccatctccagagagggccgtttgcttcttgcagatgacatgggc
ttggggaagactatccaggctatctgtattgctgcatattaccgaaaggagtggccgttg
ctggtggtaacaccttcctcagtgagatttacctgggcagaggcatttcataggtggctt
ccctccctgagcccagagagcaccaatgtcatactgacaggcaaagacaacctgtcagca
aaactggtaaacataatcagtttcgacctcctcagcaagatggaaaagcagctcaaagac
actttccaagttgtcattattgatgaatctcatttcctgaaaaacacaaaaactgcacga
tgccgagctgcaatgcctcttcttaaggctgccaaaagagtgatcttgctgtcgggaacc
cctgccgtgtcgcgccccgcggagctttatacgcagattgcggctgtcagaccaaccttc
ttccctcagttccattccttcggactccgctactgtgatgccaagaagatgccatggggt
tgggactactccagatcttccaacctaggagaactgaagcttttgcttgaagaatctgtc
atgatccgccgcctgaaatcagacgtgctctcccagcttccagcaaagcaacgcaaaatg
gtagtggtggctcctgaaggcatgaatgcaaagaccaaggctgagctggctgccgctgca
aaggacatggtcaaaggatacagaactaaacaacaggagaaggaagctctactcctcttc
tataacagaaccgcagaagccaaaatccgttcagtcatagaatacatcctggatttagtg
gaaagtgggagagacaaattcctagtgttcgctcatcacaggatagtactgaatgcaatc
agcaaagagctggagaacaaacatattggatatattcgcattgatggcaccacaccttca
gctgagcgtcagtctctgtgccagaagttccagttctccgagaagcactctgtggctgtc
ttatcccttactgctgccaacatggggctgaccctctcttctgccgacttggtggtgttt
gcagagttattctggaacccaggtgttttgatccaagcagaagatcgggcacatcgaatt
ggacaaaccagttctgttaacgttcattacctggtggctaaaggcacagcagatgactac
ttatggcctatgattcaagagaagatcaaagtgctgggcgaagccggtctttctgaagcc
agtttctctgaaacagctgaagccactgattacttctacaagcgagacccaaagcagcag
accatttacagccttttccagaggaccttctctgagcagggagacaacctcgacgaagct
ttgctcgtggaggcggctgacgcttgccaggggtctgactccaggagtgcctctcaggat
gcaggagcagacacctgctcagcgagtccatgtaagaaacagcgtcttgaagattatttt
cacagacagtaa
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