Chelonia mydas (green sea turtle): 102939793
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Entry
102939793 CDS
T02989
Symbol
DCAF1
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cmy01001
]
102939793 (DCAF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmy04121
]
102939793 (DCAF1)
Enzymes [BR:
cmy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102939793 (DCAF1)
Protein kinases [BR:
cmy01001
]
Serine/threonine kinases: Other
Other
102939793 (DCAF1)
Ubiquitin system [BR:
cmy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
102939793 (DCAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
102939793
NCBI-ProteinID:
XP_037761382
LinkDB
All DBs
Position
7:complement(45006596..45121459)
Genome browser
AA seq
1521 aa
AA seq
DB search
MTSGSGHVDSKAELTALLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVALVLRRLR
ELQGNEMTMKQENKRPSPRKLPSEPLLPLDEEAVDMDYGEMAVDGEQEEVAGEMDISFHL
DSSHKTSSRVNSATKLEDMGLRKSKSGKQHERDSFRKAKQKLGFSSSEPERMFVELSNSS
WSEMSPWVIGTNYTLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMFYIDLK
RTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYN
QDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGL
RRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSL
QRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQL
ISIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAEPVDVLDEAGSTVSTVGISIIL
GVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPKSSEHTLA
KMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSS
CQIQQLMKEPVLQDKRSDHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRI
SFPEKELLLLIRNHLISKGLGETATVLTKEADLPMTAASHSSAFTPVAAAASPVALPRTP
RIANGISARLSSHASVGSTATSVHAQPRPSVSQGPLALPGPSYASNSPLIGRISFIRERP
PPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVA
TCPPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPIS
VFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPS
RDGSLLLTSATWSQPLSALWGMKSVFDMKHSFPDDHYVEFSKHSQDRVIGTKGDIAHIYD
IQTGNKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISG
VFHPNGLEVIVNTEICLMLQKMMYPLPSPSGHLWASLFIGETFNFGDIYYLWITGHLDKA
MLQADDEDDLLEERMRSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIEN
QGSMDAMNMDTVCRLYEVGRQRLAEDEEDEEEDQKPMEEEEQEEEDDDEDDDDTDDLDEL
DTDQLLEAELEEDENNENAGEDGDNDFSPSDDEELANLLEEGDEGEDEDSDADEEVELIL
GDTDSSDNSDLEDDIILSLNE
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgacttcagggtctgggcatgtggactccaaggctgaactcactgctttgctggagcaa
tgggagaaagaacatggcagtgggcaagacatggtccctatcctcaccagaatgtctgag
ttaattgagaaggagactgaagaataccgcaagggggatccggacccgtttgacgacaga
caccctggtcgagcagatccagagtgtatgctgggccatctgctgagaatacttttcaag
aacgacgacttcatgaatgcgctggtgaatgcttacgtgatgacaagcagggaaccccca
ttaaatactgctgcctgccgactccttctggacatcatgccaggactggaaactgctgtt
gtctttcaggaaaaggaaggcatagttgaaaatctatttaagtgggcccgagaggcggat
cagccattgaggacgtatgcaactgggttgctaggaggtgctatggaaaaccaagatatt
gctgccaactacagggatgagaactcgcaactggtagctttggttcttcgacggctacgt
gagctacagggtaatgaaatgaccatgaaacaggaaaacaagcgtcccagtcctcggaaa
ctgccttcggaacctctgttgcctctggatgaagaggctgtggatatggactatggggag
atggcagtagatggggaacaggaggaagttgctggggaaatggacatctcttttcatctt
gattcaagccacaagaccagcagtcgagtgaactctgccacaaaacttgaggacatggga
ctaaggaaaagcaaatcagggaaacagcatgaaagagacagcttccggaaggccaaacaa
aaactgggcttctcttcttcagagccagagcgcatgtttgttgaattatccaacagcagc
tggtcagaaatgtccccttgggtaattggcaccaactataccctttacccattgactcct
gccatagagcagagactaattctgcagtacttgacccccttaggagaataccaagagctg
ctccctatcttcatgcaacttggatcaagagaactgatgatgttctacattgacctgaaa
cggaccaacgatgtgctgctcacctttgaagctctaaagcatttggcatcgttgctgctc
cacaacaagtttgctacggagtttgttgctcatggaggagtgcagaagctgctagagatt
cctcgtccttccatggcagctacaggggtctccatgtgcttatattatctatcctacaac
caggatgccatggagagggtgtgcatgcatccccataacgtgctgtcggatgttgtgaac
tacaccctgtggttgatggaatgttcccatgcctcgggctgctgccatgctaccatgttc
ttctccatttgcttctccttccgtgctgtcctggagctcttcgacaggcatgatggcctc
cgtcgcttagtgaacttgatcagcaccttggagatcttaaacctggaagaccagggagcc
ctcctgagtgacgatgagatctttgccagtcgccaaactgggaagcacacctgcatggcc
ctgcgcaggtactttgaagctcatcttgccatcaaacttgaacaggtgaagcagtcgctc
cagcgtactgaaggtggcattctagtccatccgcagccaccatacaaggcctgttcctac
actcatgagcagattgtggagatgatggagtttttaatagagtatggtccagcacagctc
tactgggagccagcagaagtctttctcaaattgtcttgtgtgcaactcatgctccagctt
atctccatagcatgcaactggaagacatactatgccaggaatgacacagtacgctacgct
ttggatgttctggctattcttactgtggttcctaaaatccagttgcagctggcagagcct
gtagatgtgttggatgaagcaggatctactgtctccactgtgggtatcagcatcatcctg
ggagttgctgagggtgagttcttcatccatgatgcagagatccagaagtcagcccttcag
atcatcatcaactgtgtgtgtggcccagataatcggatctccagtattggcaaattcatc
tcgggaaccccccgacgaaagctcccccaggcacccaaaagcagtgagcacacactggcc
aagatgtggaatgtggtgcagtccaacaatggcatcaaagtgctgctgtcattgctgtct
ataaagatgccaattacggatgcagatcagatccgagcgttagcctgtaaggccttggtg
gggctgtcccgtagcagtaccgtccggcagatcatcagcaagcttcccctcttcagcagc
tgtcagatccagcaactgatgaaggagcctgtgctccaggacaagcgcagcgaccatgtc
aagttctgcaagtatgctgccgagctgatagagcgtgtctcagggaagccattgctgatt
ggcacagatgtctccttggctcggttgcagaaagcggatgtggtggcccagtcaaggatc
tcatttcctgagaaggagctgctgcttttgattcggaaccatctcatctctaaggggcta
ggagaaactgctactgtcctcactaaagaggcagatctacccatgactgcggcatctcac
tcctccgccttcacccctgttgcagccgctgcctcccctgtggctctgcctcgcacacct
cgtatagctaacggtatctcggcccgactgagtagccatgcttctgtaggttctactgcc
acctctgtccatgctcaaccaaggccttctgtgtcccagggtccacttgcccttccaggt
ccttcttatgccagcaactcccctttgattggcaggattagcttcatcagagagaggcca
ccaccctgcaatggcaggaaaatcagagtgctgagacaaaaatcggaccacggcgcctac
agccagagcccagccatcaaaaagcagctggacagacacctcccttccccacccacgctg
gacagtataattacagagtaccttagggagcagcatgcccgctgcaagaaccctgttgcc
acctgcccccctttctctctttttactccccaccagtgccctgagccaaaacagaggcgc
caggcgccaactaactttacctcgcggctgacccgtagggcggcctttccgaagtatgga
ggggtggacggtggatgctttgatagacaccttatattcagcaggtttcgtccaatttct
gtgttccgggaagcaaatgaggatgaaagtggctttacctgctgtgcattctctgcacgg
gagcgattcctaatgctgggcacttgcactgggcagctgaagctctacaatgttttcagt
gggcaggaggaggccagttacaactgccataactctgccatcacgcaccttgagccatcc
agggatggatctttactgctaacatctgctacgtggagccaaccattgtctgcgctgtgg
gggatgaaatcggtctttgacatgaagcattccttcccagacgatcactacgtggagttc
agcaagcactctcaggatagggtcattggcacaaaaggggacattgcccatatctatgat
attcagactggcaacaagctattgactctgtttaacccagatcttgccaacaactacaag
aagaactgcgccacctttaaccccacagatgaccttgtcctaaatgatggggtgctctgg
gatgtccgctctgcacaggccatccacaagtttgacaaattcaacatgaccatcagtggt
gtttttcatcctaatgggctagaggtcatagtcaacacagagatttgcctgatgcttcag
aagatgatgtaccctctcccctcccccagtggacacttatgggctagcctattcataggt
gaaacttttaacttcggggacatttattacctttggataactggacatttggataaagct
atgttgcaggcggatgatgaagatgacctactggaggagaggatgagaagcccctttggg
tcatccttcaggacattcaatgcaacggactataaacctatagccaccattgatgtaaaa
cggaatatctttgatttgtgcacggacagcaaggattgctatttggctgttattgagaat
caagggagcatggatgccatgaacatggatacagtttgcaggctctatgaggtaggcagg
cagcgtttggcagaagatgaagaggatgaagaggaagatcagaagcctatggaggaggaa
gaacaagaggaagaggatgatgatgaagatgatgatgatacagatgaccttgatgaacta
gacactgaccagttgctggaggccgagctggaggaggatgaaaacaatgagaatgctggt
gaggatggagacaatgatttctctccctctgatgatgaggagcttgccaacttgctggaa
gagggggatgaaggtgaagatgaggattctgatgcagatgaagaagttgagctgatcctt
ggtgatactgacagctcagataactctgacttggaagacgacataatcttgtctctgaat
gagtga
DBGET
integrated database retrieval system
