Chelonia mydas (green sea turtle): 102939818
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Entry
102939818 CDS
T02989
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
102939818 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmy03400
]
102939818 (XRCC5)
DNA repair and recombination proteins [BR:
cmy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
102939818 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
VWA_2
VWA
DUF6005
Phage_int_SAM_5
CHB_HEX_C_1
Motif
Other DBs
NCBI-GeneID:
102939818
NCBI-ProteinID:
XP_037767922
LinkDB
All DBs
Position
11:complement(4793273..4864655)
Genome browser
AA seq
769 aa
AA seq
DB search
MRGARARWRCGAGTRARRGRLPAGRGERGTRRPGSGREMARGGGKAAIVLCMDVGFAMSN
SAPGEESPFEQAKKMMTMFVQRQVFAESKDEVSVVLFGTDGTENTLASGDQYQNITVQRH
LMLPDFDLLEDIQNAIQPGSEQADFLDALVVCMDLLQKETIGKKYEKRHIEVFTDLSSPF
SEDQLEIIIANLKKTGISLQFFLPFPVDDEDGSGDTGDGRHSDMCRNSFPRKGLTEQQKE
GICMVRKLMFALEEEGGLDEIYTFRESLERLSMFKKIERRPMAWPCQLTIGSNLSIRIVA
YKSLTEEKVKKSWTLVDAKTLKKEDVQKETVYCLDDDDETEVQKDDLVQGFCYGSDIVPF
SKVDEEQMKYKTEAKCFSVLGFSRSSQIQRHHYMGNQVLKVFAAKDDEAAAVALSALIHA
LDELDVVAIVRYAYDRRSNPQVGVAFPRIKDAYECLIYVQLPYMEDLRQYMFSSLKNNKK
YTPTEDQLSAVDSLIDSMSLAYEDEDGETTEDLFKPSKIPNPQFQRLYQCLQHKAFHPDK
PLPPIEQHLLEMLEVPQEVREKCQAPLEKIKALFPLKDAGKKKEQKTAQDVFKDNNEDGP
SAKRAKAENEEGSFSIANLAEGSVTTVGSINPAENFCVLVRQKNANFKEVSQQLINRIEQ
FLETKGLQYYMKSINCIRVFREEAIKLAEVQCFNDFLQALKEKVEDKTLADFWEILIQDG
ISLISKDEAEGSSVTHEEAKKFLAPKEKPAEAPSMAGEGGDVDDLLDMM
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggggcgcgcgctaggtggcgctgtggggccggaacgcgagcgcggcggggccgg
ttgccggccggacgcggagagcgcgggacccgccggcccggttcggggcgcgagatggcg
cggggaggcggcaaggcagccatagtgctgtgtatggatgtaggctttgcaatgagcaat
tctgctcctggagaggagtctccgtttgaacaagccaagaagatgatgacgatgttcgtg
cagcgacaggtgtttgctgagagcaaagatgaagtctctgtagttttgtttggcacagat
ggtacagagaatacccttgccagtggtgatcagtatcagaacattactgtacagagacac
ctgatgctaccggattttgatttgctggaggacatacaaaacgcgattcaaccaggctct
gaacaagcagacttcctggatgcacttgtcgtgtgcatggacttgcttcagaaggaaaca
ataggaaagaaatatgagaaacgacacattgaggtgtttacagaccttagcagtcccttt
agtgaggatcagctggaaattatcatcgctaacttgaagaaaacgggaatctcactgcaa
tttttcttgccgtttccagtggatgatgaagatggaagtggggatacgggcgatggtcga
cattctgatatgtgcagaaactcttttccaaggaagggcttaaccgagcagcagaaagaa
ggcatctgtatggtgagaaaattgatgtttgctttagaggaagaaggaggcctggatgaa
atttacactttcagagagagcctggagcgtctttcaatgtttaagaaaatcgaaagaaga
cctatggcttggccttgccagctaactataggttctaatctgtctataaggattgtggca
tacaaatcactcacagaagagaaggtgaaaaagtcctggactcttgtggatgccaagacc
ttaaaaaaagaagatgtgcaaaaagagactgtctactgcttggatgatgacgatgaaaca
gaagttcagaaagatgatcttgttcaagggttctgctatgggagcgatatagttcctttc
tctaaagtagatgaggagcaaatgaaatacaaaaccgaagcgaagtgtttttctgtacta
ggattcagcagatcatctcagatccagaggcatcactacatgggcaaccaggttctgaag
gtctttgcagcaaaagatgatgaggctgcagcagttgctctttctgccctgattcatgct
ttggatgagttggatgtggtggccatagtgcgttatgcttatgacagaagatctaatcct
caggttggcgtagcctttccacgtatcaaggatgcatatgagtgtctgatatatgtgcag
ttaccctacatggaggacttacgacaatacatgttttcctctttgaaaaacaataaaaag
tacactcctacagaggatcagttatctgcagttgattctctgattgattctatgagtttg
gcttatgaagatgaagatggggagacaaccgaagacctatttaaacccagcaaaatccca
aaccctcagtttcagaggttgtatcagtgcctgcagcataaggcttttcatcctgacaag
ccgctgccacccattgaacagcaccttttggaaatgttggaggtacctcaagaggtgaga
gagaagtgccaggctcctcttgaaaaaataaaggcacttttccccctgaaagatgccggc
aagaagaaagaacagaagactgctcaagatgtcttcaaagacaacaatgaagatggaccc
agtgcgaagagggcaaaagctgaaaatgaagaaggcagctttagcatcgcaaaccttgct
gaaggcagtgtcaccactgttggaagtattaaccctgcagaaaacttctgtgttctagtg
aggcagaagaatgcgaacttcaaggaagtgagccagcagctgataaaccgcattgaacag
tttttggaaactaaaggtttacagtactacatgaagagcatcaactgtattagagttttc
agagaggaggccattaagctggcagaggtgcagtgctttaatgatttcctccaggccctg
aaagaaaaggtagaagacaaaaccttagctgatttctgggagattctgatacaagatgga
atttctttgatctccaaagatgaagcagaaggtagttcagtgactcacgaggaagccaaa
aagttcttggcccccaaagaaaaaccagctgaagctccgtcaatggctggtgaaggtggt
gatgtggatgatttactggacatgatgtaa
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