Chelonia mydas (green sea turtle): 102940084
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Entry
102940084 CDS
T02989
Symbol
PIF1
Name
(RefSeq) ATP-dependent DNA helicase PIF1 isoform X1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmy03032
]
102940084 (PIF1)
03029 Mitochondrial biogenesis [BR:
cmy03029
]
102940084 (PIF1)
Enzymes [BR:
cmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102940084 (PIF1)
DNA replication proteins [BR:
cmy03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
102940084 (PIF1)
Mitochondrial biogenesis [BR:
cmy03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
102940084 (PIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
PH_LRR1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
Herpes_Helicase
UvrD_C_2
AAA_7
Mg_chelatase
ABC_tran
RsgA_GTPase
PhoH
3-HAO
DUF815
SLFN-g3_helicase
AAA
Motif
Other DBs
NCBI-GeneID:
102940084
NCBI-ProteinID:
XP_027679763
LinkDB
All DBs
Position
8:106476409..106499832
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AA seq
649 aa
AA seq
DB search
MQGAELDARIRCSVTIERLSPSGPASRRRLIRDAALALGRDEFRELVLQVSDGSVAQSFA
LRGEVRLFTRFVRDGKSGLQLGAAQVQLLIANCPPDRLRRFLRLLRIKRQAAGKGLKTVT
ERARLLSSLPRTFDTISPVQARDVQQACAQRAHASCEATPVKGQAPRDGGNNGLCGKPRK
RARTESAEASAVRALEAADVKCSKKLSLLMHSRMRLSQEQSIVLSAVLTGKNVFFTGSAG
TGKSYLLKKIVGSLPPKSTYATASTGVAACHIGGTTLHAFAGIGSGKAPLNQCIELAQRT
GVRQHWLSCQHLIIDEISMVEGKFFDKLEAVARAVRKRDDPFGGIQLIICGDFLQLPPVS
KGNEETKFCFQAKSWRKCIHVNMELTEVRRQTEKSFISLLHTVRLGRCTDEVTKQLMQTA
THRVERDGILATRLCTHRDDVELTNERRLQQLPGEMHFYEAVDSDPMLVKAIDAQCPVSR
YIQLKPGAQVILTKNLDVSRGLVNGARGVVVEFEADGKGLPQVRFLCGVTELIRLERWVF
KGPSGIYLSRQQLPLKLAWAISIHKSQGMSLDCVEISLSRVFESGQAYVALSRARSLEGL
RVLDFDPSVVRANPYVLQFYKQLQKEQLLSQASLHRYIEAEEKENWKSS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcgcggagctggacgctcggatccgctgcagtgtcaccatcgagcggctgagc
ccgagcggcccggcctcgaggcgccggctgatccgcgacgccgccctcgccctgggccgg
gacgagttccgggagctggtgcttcaagtgagcgacggcagcgtggcgcagagcttcgcg
ctgcgcggggaggtgcggctcttcacgcgcttcgtgcgcgacgggaaaagcggcctgcag
ctgggcgccgcgcaagtgcagctgctgatcgccaactgcccccccgaccgcctcaggcgc
ttcctccggctgctgcgcatcaagcgccaggcggcggggaaggggctgaagaccgtcacg
gagcgggcgcggctgctgtccagccttccgcgcaccttcgacaccatcagcccagtccag
gcccgggacgtgcagcaggcctgcgctcagcgggcccacgcgagctgcgaggcaacgcct
gtgaaagggcaggccccgagggacggagggaacaacggtctgtgcggcaagccgcggaaa
agagccaggacagaatcggctgaagcaagcgctgtaagagctctcgaagcggctgatgtg
aaatgctcaaagaagctatctttgctaatgcattcacggatgagactctcgcaggaacag
tccattgtgctgagtgcagtgctgactgggaagaacgtcttctttacaggcagtgctggg
actgggaagtcatatctgctgaaaaagattgtgggttcactccccccaaagagcacctat
gctacagccagtacaggagtagcagcttgtcatattggtggcaccacactccatgctttt
gcaggtattggttctgggaaagctccactcaatcagtgtattgagttggctcaaagaact
ggagtgcgtcaacattggttgagctgccaacacttaattattgatgagatttcaatggtg
gagggcaagttctttgataagctggaggcagtagccagagctgtcaggaaacgggatgat
ccatttggaggaatacagctgatcatctgtggggacttcttacaactgccaccagtcagc
aaaggcaatgaggaaaccaagttctgcttccaggcaaagagctggaggaaatgcatccac
gtgaacatggagctgacagaagtccggagacagactgaaaagagcttcatctcactcctg
catacagtccgcctgggcaggtgcacagatgaggttaccaagcagctgatgcaaacagct
acccacagggtcgagagagatgggatccttgcaactcgtctctgcacccacagggatgat
gtggaactaacaaatgagagacgattgcaacagttaccaggagaaatgcacttctatgag
gctgtggatagtgatcccatgctagttaaagcaattgatgctcagtgtccagtaagtcgc
tatattcagttgaaaccaggagcccaggtgattcttactaagaacctggatgtgtcccgg
ggtctggtgaatggggcaagaggggttgtggttgaatttgaagctgacgggaagggactg
ccccaagtgaggtttctttgtggggtcacagagttaatcaggctggagcgctgggtcttc
aaaggtccatctggaatttatctgagtcgtcaacagttgcctctaaaattggcatgggcc
atatccatccacaagagccagggtatgtcattagactgtgtggagatctccctgtctcga
gtctttgaaagtggtcaggcttatgtagccctttcccgagcccgtagccttgagggcctc
cgggttctggattttgatcccagcgttgtgagagccaatccatacgtgctacagttctac
aaacagttacagaaagaacaacttctatctcaggcttctctacacagatacattgaagca
gaagagaaggagaattggaaatctagctga
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