Chelonia mydas (green sea turtle): 102940303
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Entry
102940303 CDS
T02989
Symbol
CNTN6
Name
(RefSeq) contactin-6 isoform X3
KO
K06761
contactin 3/4/5/6
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmy04515
]
102940303 (CNTN6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cmy00537
]
102940303 (CNTN6)
Cell adhesion molecules [BR:
cmy04515
]
Immunoglobulin superfamily
Contactins
102940303 (CNTN6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cmy00537
]
Others
102940303 (CNTN6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_5
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_2
V-set_CD47
Ig_4
Tissue_fac
Herpes_gE_N
Motif
Other DBs
NCBI-GeneID:
102940303
NCBI-ProteinID:
XP_027679502
LinkDB
All DBs
Position
7:12972985..13194200
Genome browser
AA seq
1028 aa
AA seq
DB search
MMLLWKLVILLPLLSCNTEEDTLHSPIFIQEPYDITYSIGSEDPEILLNCTAKGYPLPYY
RWKQNGTDIDLTMSYHYRLVGGSLAINNPHTKQDIGTYQCLATNSFGTILSRKAKLQFAY
LGNFETKTRSTVSVREGQGVVLLCGPPPHYGDLSYAWIFNDNPLYVQEDSRRFVSQETGN
LYIAKVEPSDVGNYTCIVTNAKSEQSVRGPPTPLILRSDGVMGEYEPKIEVRFPETTYAA
KGSSVKLECFALGNPVPSISWKRSDGHPLARKIKHYKSKGVLEIPDFQQEDEGFYECIAG
NIRGRNIARGQLIIYALPEWDKKIQNAYLSLYDSLFWECKASGKPSPSYSWLKNGQPLMP
EERIQIENGTLTITMLNVSDSGLYQCVAENKYNTIYANAELRVIASAPDFSKNPVKQMSV
AQVGGEVTIECKPNASPRAVINWKKGTNVLRQNKRIFMLEDDSLKIYNITKTDAGVYTCI
AMNQFGVARNSGTLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPSAEVVLTWSFNGD
VIDFKRGVNHFERIGGESVGDLMIRNIQLNHSGKYVCMVQTTIDSLSAAADVIVRGPPGP
PQDVRIEHISSTTALLCWRPGTDNNSPVQIYSVQTRTPFSVGWQAVSTVPEVLNGRTYSA
TVTGLNPWVEYEFRVVAGNNIGIGEPSRPSELLRTKASIPLVAPTNVSGGGGSRSELVIA
WESVSEELQNGEGFGYIIMFRPLGSTSWTKAVVASVEASKYVYRNESIIPLSPFEVKVGV
YNNEGEGTLSSIFIVYSGEDEPQIAPMGVSVQSFSASEVEVSWNAIAWNRHTGRVLGYEV
LYWTDDSKETAAGKVRVSGNVTAKNITGLKANTIYFATVRAYNTAGTGPSSTPVNITTKK
SPPSQPPANIAWKLTNSKICLNWEHVKTMENESEVLGYKISYRQNRQSKTHILETNNTSA
ELLVPFEEDYLIEIRTVSDGGDGSSSEEIRIPKMSSLNSRGTKSFPLVVHVVTNGITILN
CILTFSAL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgctatggaaactagtaattctgctgccactcctgagctgcaacacagaggaa
gatactcttcacagtcctattttcatccaagagccatatgacatcacttattctattggt
tcagaggacccagaaatactgctgaattgtacagccaaaggatatccattgccatactac
aggtggaagcaaaatggcacagatattgatcttaccatgagttatcactacaggttggtt
ggaggcagcttggcaatcaataacccacatacaaaacaggatattggaacataccagtgt
ttggccacaaattcatttggaacaattctgagcaggaaggcaaagcttcaatttgcatat
cttggaaattttgaaaccaaaacaagaagcaccgtctcagtcagagaaggacaaggagtg
gttttgctttgtggtcctccaccacactatggagacctttcctatgcttggatcttcaat
gataaccccttgtatgttcaggaggatagtcgtcgatttgtatcccaagagacaggaaat
ctatacatcgccaaagtagagccatctgatgtgggcaattacacctgtattgtaactaat
gctaaatcagaacaaagtgttcggggcccacccactccactcatcctccgtagtgatggt
gtgatgggagagtatgaaccaaagattgaagtacgttttccagaaacaacatatgcagcg
aagggttcatctgttaaactggaatgctttgcccttggaaatccagttcccagtattagc
tggaagaggagtgatggacacccattggcaaggaaaatcaaacactacaaatccaaagga
gtccttgaaatcccagattttcagcaggaagatgaaggcttttatgagtgtattgcagga
aacattcgaggaagaaacattgcaagaggtcaactaataatctatgcactccctgaatgg
gataaaaaaattcaaaatgcctatctgtctctctatgacagcttgttttgggaatgtaaa
gcaagtggaaaaccaagtccttcctacagttggttaaaaaatggccaaccccttatgcca
gaggagagaattcaaatagaaaatggaactcttaccataactatgctgaatgtatcagat
tctggcctctatcagtgtgttgcggaaaacaaatacaatacaatttacgccaatgctgag
ttaagagtgatagcttcagccccggatttttccaaaaatcctgtgaaacaaatgtcagtt
gctcaagttgggggtgaagttaccattgaatgtaaaccaaatgcttctcccagggcagtt
atcaactggaaaaagggcaccaatgttctgcgacaaaacaaaaggatctttatgctagag
gatgacagtctcaagatatataatattaccaaaacagatgcaggagtgtacacttgtata
gcaatgaatcaatttggagttgccaggaattcaggaaccctgattgtgaaagagaggact
gtaattactgttccaccttctaaaatggatgttacagttggagagagtatagtcctacca
tgtcaggtgtctcatgacccctccgctgaggttgtgctcacatggtcattcaatggagat
gtgatagattttaaaagaggagtgaatcattttgaaagaattggaggagaatctgttggg
gatttgatgataagaaatattcagctaaatcattccgggaaatacgtttgcatggtacaa
acaaccatagacagtctatctgcagcagcagatgtaattgtaagaggccctccaggtcct
ccacaagatgttagaatcgaacacatttctagcactactgccctgctatgctggagacca
ggaacagataataatagtccagtccagatctacagtgttcagacaaggactcctttttca
gttggatggcaggcagtttcaaccgttcctgaagttctcaatggtagaacctattcagca
acagtgactggtttaaacccttgggttgaatatgaattccgtgtggttgctggcaataac
attgggattggggagccaagcagaccatcagagctgctaagaacaaaagcatcaattcct
ctagtggcacctacaaatgtgagcggaggtggagggagtcgctctgagcttgtcatcgca
tgggagtcagtttctgaagaactacaaaacggggaaggttttggctacatcattatgttt
cggcctcttggttcaacaagctggacaaaggcagtagtggcttcagtagaagcatcaaag
tatgtctaccgaaatgaaagtattatacctctctctccttttgaagttaaagtgggtgtc
tacaataatgaaggagaagggactctgagctctatattcattgtctactcaggagaagat
gagccacagattgcaccaatgggggtttctgtgcagagcttttcagcttctgaagttgaa
gtatcttggaatgctattgcatggaacaggcatacaggaagggtacttggctatgaggtt
ttatactggacagatgattccaaggaaaccgcagctggtaaagttagagtcagtggaaat
gtaacagcaaaaaacatcacaggactaaaggccaacacaatatattttgcaacagtaaga
gcttacaacacagctgggacaggaccatccagcactccagtcaacatcactactaagaag
tcaccaccaagtcaaccaccagcaaacattgcatggaaactgacaaattcaaaaatatgc
ttgaattgggaacatgtaaaaacaatggaaaatgaatcagaagtgttaggctacaaaatt
tcatacaggcaaaatagacaaagcaaaactcatatactggagacaaacaacacctcagct
gagcttctggtaccatttgaagaagattatctcatagaaataagaacagtcagcgacggt
ggggatggcagcagtagtgaggaaattaggattccaaaaatgtcaagtttaaactccaga
ggaacaaaatcattcccgttggtagtccatgtggtaacaaatgggattacgattctgaat
tgcattcttactttctcagctctttga
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