Chelonia mydas (green sea turtle): 102940531
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Entry
102940531 CDS
T02989
Symbol
SNTB1
Name
(RefSeq) beta-1-syntrophin isoform X2
KO
K24064
beta-syntrophin
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102940531 (SNTB1)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
102940531
NCBI-ProteinID:
XP_007063456
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Position
2:23890198..24062120
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AA seq
551 aa
AA seq
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MAVAAAGAGGGRAQQRSGWLEVLVRDRWHKVLANLAEDALVLSCEERADGAAHNGVGASG
NGAPCRGAAAGRGSQPGAAGNPGGAAEPAGSGGGSPKAGGGPGVRTAFTELPEQVPDAIS
NKKRCVKVQKQELGGLGISIKGGKENKMPILISKIFKGLAADQTQALYVGDAILAVNGTD
LRDATHDEAVQALKRAGKEVLLEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGGVSS
DPLSQLSLTIHRDRKTIPLKMCYVTRNMSVSDPENRLLEVHSPDAKHTVVLRSKDSATAQ
AWFNAIHSSVSDLIPRVISEVKDQLGKTGIAGSREIRHLGWLAEKVPGENEKHWKPALVV
LTEKDLLIYDSMPRMKEAWFSPLHTYPLLATRLVHSGPGKGSPQSGVDLSFATRTGTRQG
IETHLFRTETSRDLSLWTRNIVQGCHNSAELITEIATSCTYKNQECRLTIHYEHGFSLTV
EPQDGALSKTIAQCPYEKLKMSSDDGIRMLYLDFGGKDGEFQLDLHSCPKPIVFIIHSFL
SAKITRLGLVA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcagccggagccggcggcggccgggcgcagcagcggagcggctggctg
gaagtcctggtgcgggaccgctggcacaaagtcctggccaacttggccgaggatgccctg
gtgctgagctgcgaggagcgcgccgacggcgcagcccacaacggcgtcggggccagcggc
aacggggcgccctgccgaggggctgccgctggccgcgggagccagccgggcgccgcgggc
aaccccggcggggcggccgagcccgcgggcagcggcggcggcagccccaaggcggggggt
ggccccggggtgcgcaccgccttcaccgagctccccgagcaagtgcccgacgccatctcc
aacaagaagcggtgcgtgaaggtgcagaagcaggagctgggcgggctgggcatcagcatc
aagggcggcaaggagaacaagatgcccatcctcatcagcaagatcttcaaggggctggcg
gccgaccagacccaggccctctacgtgggcgatgccatcctggccgtgaacgggacggac
ctgcgggacgctacccacgacgaggcggtgcaggcgctcaagcgggccggcaaggaggtg
ctgctggaagtgaaatacatgagagaagcaaccccgtatgtgaagaaaggttctccagtt
tcagaaattgggtgggaaacacctccacctgaatctccacggttgggtggtgtatcctct
gacccactgtcgcagctttctctcaccatccacagagacagaaaaacaattccgctcaaa
atgtgctatgtgacacgcaacatgtcggtgtcagatcctgaaaacaggcttcttgaagtc
cattcccctgatgccaagcacactgtggttctaaggagcaaggattcagccacagcccag
gcctggttcaatgctatccactccagtgtgagtgaccttattcccagggtgatttcagag
gtgaaagaccagctgggtaaaactgggatcgctggaagtcgagagattaggcatctaggc
tggcttgcagaaaaggtgccaggagaaaatgagaagcactggaagccagcactggttgta
ctgacggagaaggaccttttaatatatgacagcatgccacgaatgaaagaagcttggttt
agccctctacatacttaccctctgctagccaccaggttggtccattcaggtcctggtaag
ggatccccacaatctggggtggatttatcttttgcaacgcgcaccggtacaaggcaaggg
attgaaacccatctcttcaggacagagactagcagagacctctcactgtggacaaggaac
atagtgcagggctgccacaattcagctgagctgatcacggaaatcgcaacctcttgcacc
tacaaaaaccaggagtgccgtttgaccatccattatgaacatggattctctctcacagtt
gaaccacaagatggtgccttgtccaaaacaattgcacagtgtccctatgaaaaactaaaa
atgtcttcagatgatggcattaggatgctttatttagacttcggaggcaaagatggagaa
tttcaactggaccttcattcttgtccaaagccaattgtgttcatcattcattccttcctt
tcagctaagattacaagacttggtttggtggcataa
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