Chelonia mydas (green sea turtle): 102940757
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Entry
102940757 CDS
T02989
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cmy00535
]
102940757 (COL14A1)
Proteoglycans [BR:
cmy00535
]
Extracellular matrix (ECM) proteoglycans
Others
102940757 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
vWA_SIBA-E
DUF4959
VWA_3
Motif
Other DBs
NCBI-GeneID:
102940757
NCBI-ProteinID:
XP_007063457
LinkDB
All DBs
Position
2:complement(24184807..24350432)
Genome browser
AA seq
1886 aa
AA seq
DB search
MKVCRYKIHSWFLLAFLAVHLISHVQGQVAPPTRLRYNLVTHDSVQISWKAPKGKFTGFK
LLVTPSSGGKTNQLTLQNSATKAIIQGLIPDQSYAVQIIASNKDQESKPAQGQFRIKDLE
RKKETSSKSKVKGTEGQGYGSKPSPSTEESQFTCKTPAIADIVILIDGSWSIGRYNFRLV
RLFLENLVGAFNVGSEKTRIGLAQYSGDPRIEWHLNAFSTKDAVLDAVRNLPYKGGNTLT
GLALTFILENSFKPEAGARSNVSKIGILVTDGKSQDDVIPPAKNLRDAGVELFAIGVKNA
DINELKEIASEPDSTHVYNVADFNFMHTIVESLTRTVCSRVEEQEKEIKGTFVATLGAPT
NLVTSEVTARGFRVSWTHAPGKVEKYRVVYYPIRGGQPEEVVVDGSVSTAVLKNLMSLTE
YQIAVFAIYISAASEGLRGSETTLALPTASNLQLYDVSQSSMRAKWNGVAGATGYMILYA
PLTEGLAADEKEMKIGEALTDIELDGLLPNTEYTVTVYAMFGEEASDPLTGQETTLPLSP
PRNLRFSDIGHSTSRITWDPASEKVNGYRIMYVKTDGTETNEVEADRVSTYTLKRLTSLT
EYTVAIFSLYDEGQSEPLTGSFTTKKVPAPQYVEIDEVSTDSFRVNWKPISSDIARYRLA
WTPLNGGASEEVVLDGDKDTHVVEGLLSDTEYEVSLLAVYSDESESDVVAVLGTTLARTT
TVSTSIATTRTATSRPTTAVFRTGIRNLVIDDETTSSLRVTWDVSDYNIHQFRVTYLISK
GDRAEEVVMVPGRQNNLLLQPLLSDTVYKVTVTPIYSDGEGVSVSAPGKTLPLSAPRNLR
VSDEWYNRLRISWDAPPSPTMGYRIVYKPINIPGPALETFVGDDINTILILNLFSGTEYS
IKVFASYSTGFSDALAGTAKTLYLGVTNLDAYQVHMTSICAQWQLHRHATAYRIVIESLV
DGKKKEVTLGGGTSRHCFFELMPGTEYKISVYAQLQEIEGPGVSIMETTLPFPTQPPTSP
STIAPPPTIPPAKEVCKAAKADLVFLVDGSWSIGDDNFNKIIGFLYSTVGALDRIGPDGT
QVAIAQFSDDPRTEFKLNVYKTKETLLEAIQHIAYKGGNTKTGKAIKHAQEALFTTDSGI
RRGIPKVLVVITDGRSQDDVNKVSREMQLDGFSIFAIGVADADYSELVNIGSKPSERHVF
FVDDFDAFKKIEDELITFVCETASATCPLVYKDGNSLAGFKMMEMFGLVEKEFSTVEGVS
MEPGTFNAYPCYRLHKDALVSQPTKYLHPEGLPSDYTITFLFRILPDTPQEPFALWEILN
EKYEPLVGVILDNDGKTLIFFNYDYKGDFQTVTFEGPEIKKIFYGSFHKLHVVISKTTAK
IIVDCKQVSEKTINAAGNITSDGIEVLGRMVRSRGQRDNSAPFQLQMFDIVCTTSWANRD
KCCELPALRDEESCPSLPHSCSCSEFSKGPLGPPGPPGGPGVRGPKGHHGDQGPKGLDGP
RGEVGAPGPQGHPGPQGPSGLSIQGLPGTPGEKGEKGDRGLPGQQGVPGASGPPGRDGTQ
GQRGPPGKDGPTGPQGPPGPVGIPGAPGVPGVMGNTGPQGGVGPPGAPGAKGERGERGDI
QSQAMVRAVAHQVCEQLIQGHMARYNSILNQIPSQSVSERTIPGPPGEPGRPGSPGSQGE
QGAPGRPGFPGNPGQPGRPGERGLPGEKGERGNPGVGTQGPRGPPGPAGPSGESRTGSPG
PPGSPGQRGPTGHTGVPGPQGPSGPPGYCDPSSCAGYDVGGGYGDATDQDIPVVQLPHNS
YQIYDPEELYDGEQQQYIVHGSYPQPAQYPQSSYPEPHLAQPEFTPVQEEMEAIEVRSPG
ISRFRRQISKRSVNTPIRKRAIKKNT
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttgtcgatacaagatacacagctggttcctcttggcttttttggcagttcat
ctcatcagtcatgttcagggtcaagtggctccaccaacaagactaaggtataatctagtc
actcatgacagtgtacagatttcatggaaagcccctaaagggaaatttactggatttaag
cttcttgtcactccaagttcaggtggaaaaaccaatcaactaactcttcaaaacagtgca
accaaagcaattattcaaggtcttattccagatcaaagctatgcagttcagattattgca
tccaataaagaccaagagagcaagccagcacaagggcagttcagaattaaagatctagaa
agaaagaaggaaacatcaagtaaatccaaggtcaagggtacagaaggtcaagggtacggg
agtaaaccatctccatctacagaagaaagtcagtttacatgtaaaactccagcaattgca
gacattgtgatcctgatagatggctcatggagtattggcagatacaacttcagacttgtc
cggcttttcctggaaaatctggttggtgccttcaatgtgggttctgagaaaacaagaata
ggtcttgctcagtacagtggggatccccgaattgaatggcatctgaatgcctttagcaca
aaggatgctgttttggatgcagtccgtaatctgccatataagggagggaatacattaaca
ggtcttgccttaacttttattttggagaacagctttaagcctgaagcaggtgcaagatcc
aatgtgtccaaaattggtatattggtcacagatggaaaatcccaagatgatgtcatccca
cctgctaaaaatctgcgtgatgctggtgttgaattgtttgctattggtgtgaagaatgca
gatataaatgaactcaaagagattgcctctgaaccggacagtactcatgtctacaacgtt
gctgactttaacttcatgcacaccattgtagaaagtcttacgagaacagtgtgttcaaga
gtggaggaacaggaaaaggaaatcaaaggaacatttgttgccactcttggagctcctact
aatttggtcacatctgaggtaacagccagaggattccgtgttagctggacccatgcaccc
ggcaaggtggaaaaatacagagttgtgtactatcccattagaggaggccaaccagaggag
gtagtggtggatggaagtgtatcaacagcagttctgaaaaacctgatgtctctaactgaa
tatcagatagctgtgtttgctatatatataagtgctgcaagtgagggcctccgtggtagt
gaaactacacttgctttgcctacagcatcaaatctgcaattgtatgatgtgtcacagagc
agcatgagagcaaagtggaatggagtagcgggtgccactggttatatgatcctatatgct
cccctcacagagggactggcagcagatgaaaaggagatgaaaattggagaggccttgaca
gatatcgaactggatggattattgcctaacacagaatatacagtcacagtttatgcgatg
tttggagaagaagctagtgaccccctgacaggacaagaaacaacattgcctttaagtcca
cccaggaacttgagattttcagacatcggacacagcacttccaggataacatgggatcct
gcttccgaaaaagtaaatggttatcgtattatgtatgttaaaactgatgggacagagacc
aatgaggtggaagctgatcgcgtttcaacatacaccctgaaaaggctgacatcccttaca
gaatatactgttgccattttttccctctatgatgaaggacagtctgagccgctgactggc
agctttactacaaaaaaagttccagccccacagtatgtggaaatagatgaagtatcaaca
gatagttttagagtcaattggaagcccatctcctctgatattgctcgctacagattggca
tggaccccactgaatgggggtgcatctgaagaggttgtcttagatggagacaaggacacg
catgttgttgagggtttgttatccgatacggagtatgaagtttctttgctggcagtttac
agtgatgaaagtgaaagtgatgttgttgctgttcttggaactacacttgcaaggaccacc
acagtatctaccagcattgctactactcgtacagcaacttccagacccacaacagcagtt
tttcgaacaggaatccgaaaccttgttatagatgatgaaaccacatcaagcttgagagtg
acatgggatgtttcagactacaacattcaccagttcagagtgacctacctcattagtaaa
ggtgatcgtgctgaggaagtggtaatggtacctggaagacaaaacaatcttcttcttcag
ccgctgctctcagatactgtatacaaagttactgtcactcccatctattctgatggggaa
ggagtcagtgtctcagctcctggaaaaaccttgcctctttctgcccccagaaatttaagg
gtctcagatgagtggtacaaccgattacgtattagctgggatgcccctccgtcgccaaca
atgggttacaggattgtctacaaacctatcaatatccctggaccagcactggagaccttc
gtgggagatgatattaacaccattctcattcttaatctgttcagtggaactgagtatagc
attaaagtatttgcttcatactcaacaggcttcagtgatgccctagcaggcacagccaaa
acattgtacttgggggtgacaaatctggatgcatatcaagtgcacatgactagtatttgt
gcccagtggcagcttcacagacatgctactgcatacaggatagttatagaatctcttgtt
gatgggaagaagaaagaagtaacccttggtggaggaacatctagacattgcttctttgag
ctcatgcctggcactgagtataaaatcagtgtctatgcccagcttcaggagatagaaggc
cctggtgtaagcatcatggaaactacattgccatttccaactcaaccaccgacttctcct
tcaacaatagctccaccacctacaatccctcctgcaaaagaagtttgcaaagctgccaag
gctgacctggtgttcctagtggatgggtcatggagtattggagatgacaatttcaataaa
ataattggattcctgtatagcactgttggagctttggacagaattggtcctgatggaact
caggttgccatagctcagttcagtgatgatcccagaacagaatttaaactgaatgtgtac
aaaacgaaagagactcttcttgaagccattcagcacatagcgtacaaaggaggaaacacc
aaaacaggcaaagcaattaagcatgcacaggaggccttgtttaccactgattcaggcata
aggaggggtatccctaaagttttggtggtaattactgatggacgatcacaggatgatgtg
aacaaagtctccagagagatgcaactagatggtttcagcatttttgctattggtgtggcg
gatgcagattattcagaattagttaacattggcagcaagcctagtgaaagacatgtcttc
tttgtggatgattttgatgccttcaagaagattgaagatgagctgatcacttttgtctgt
gaaactgcatcagcaacctgcccattggtatataaggatggcaacagtttagcaggattt
aaaatgatggaaatgtttggtttggttgaaaaggagttttcgacagtagaaggagtatct
atggagcctggtacttttaatgcttatccgtgttacagactgcataaagatgccttggtt
tcccagcctaccaaatacttgcacccagaggggctgccttccgactacaccattactttt
ctattccgtatactccctgacacaccccaggagccatttgctctgtgggagattttaaat
gaaaaatatgagccacttgttggagttattttggacaatgatggtaaaactctgattttc
tttaattatgactacaaaggggattttcaaactgttacttttgaaggccctgaaataaag
aaaatattctacggaagtttccataagttacatgttgttatcagcaagactacagccaaa
attattgttgactgcaagcaagtgagtgagaagacaattaatgcagcagggaatattact
tctgatgggatagaagtgctaggaagaatggtcagatcccgaggacaaagggacaactct
gcaccattccagttacagatgtttgacattgtttgtaccacctcctgggccaatagagac
aaatgctgcgaacttcctgccttgagagatgaggaaagttgcccatctcttcctcattct
tgctcctgttccgaatttagcaaaggaccactcggacctcccggaccaccgggtggtccg
ggtgtcagaggcccaaagggacatcatggtgatcaaggtccaaagggcctagatggacct
cgtggtgaagttggtgctccaggaccccaagggcatccaggaccgcaagggccaagtgga
ctttctattcaagggcttccaggaacaccaggtgaaaaaggagagaagggtgatcgtggt
ctccctggccagcagggtgtcccaggagcatcaggaccaccgggacgggatggaactcaa
ggtcaaaggggtccgcctggcaaagatggacccacagggccccaaggtcctcctgggcca
gtgggaatacctggtgctcctggtgttccaggtgttatgggaaacactgggccacaaggt
ggtgttggacctcctggtgctcctggtgcaaagggggaaaggggtgagcggggtgacatt
cagtcccaggcaatggtgcgtgcggttgctcatcaggtgtgtgaacagctcatccaaggt
cacatggccagatataattcaattctgaaccagattccaagtcagtctgtctcagaacga
actatcccaggacctcctggcgagccaggtcgaccaggatctcctgggtcacagggagaa
caaggagcaccaggaagacctggatttccaggcaatcctggccagccaggaagaccagga
gaaagaggtttaccaggcgagaaaggagaaagaggcaacccaggtgttggaacacaaggg
cccagaggcccaccagggcctgcaggaccttctggtgaaagtcgaactggcagcccaggg
ccaccaggatccccaggccaacgaggcccaactggtcatacaggtgttcctggtccacag
ggtccttctggcccacctggttactgtgatccttcttcttgtgctgggtatgatgtggga
ggtggatacggtgatgcaactgatcaagacatccccgtagtgcaattgccacataactcc
taccaaatctatgacccagaggaactttatgatggtgagcaacagcagtatatagttcat
gggtcctacccccaaccagcccaatatccccagtcctcctatccagaacctcatcttgct
caaccagagtttactcctgttcaggaagagatggaagccattgaagtgagatctcctgga
attagtcgtttcagaaggcaaatatcaaaaagaagtgtgaacactccaatacgtaagagg
gcaattaaaaaaaacacttaa
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