Chelonia mydas (green sea turtle): 102940783
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Entry
102940783 CDS
T02989
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04120
Ubiquitin mediated proteolysis
cmy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102940783 (SYVN1)
04120 Ubiquitin mediated proteolysis
102940783 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmy04121
]
102940783 (SYVN1)
Enzymes [BR:
cmy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102940783 (SYVN1)
Ubiquitin system [BR:
cmy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102940783 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-ANAPC11
zf-RING-like
zf-RING_5
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Motif
Other DBs
NCBI-GeneID:
102940783
NCBI-ProteinID:
XP_027688304
LinkDB
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Position
7:31348769..31375636
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AA seq
630 aa
AA seq
DB search
MFRTAVMMAASLALTSVVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIISLMLLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYILHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKRAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVM
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSQTPPEQQEQAQQQQQQPP
PHHTPLIPQPPNFPQGILPPFPPGMFPLWPPIGPFPPVPGVQPPNNAENPSAASSAPSAS
GIQTTASTSRPVGDSASGSDTAPVGTVPGFPFPPPWMGMALPPLFGFPPMPVPPAGFAGL
TDEELRAMEGHDRQHLEARLQCLQNIHTLLDAAMLQINQYLTVLATIGSPRPTQLPSSLN
TSTSSQETPTRESTTFNSPDSTSSPGTSPAVEPDSTGQTDDPSGLVGAEGYTEPAGHEEE
EERPLPGEPDTAELRRRRLQKLESSSPPSH
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgttccgaacggcagtcatgatggctgccagcctggctctgacatcggtggtagtggct
cacgcctattacctgaagcaccagttctacccaacagtggtgtatctgaccaaatccagc
cccagcatggcagttctctacattcaggcttttgttttggttttcctcctgggcaaattc
atgggcaaagtgttttttggccagctccgagcagcagaaatggagcacttacttgagagg
tcatggtatgcagtcacggaaacttgcctggccttcaccgtcttcagagatgacttcagt
ccccgctttgtggccctcttcacccttctcctgttcctcaagtgcttccactggctcgct
gaggaccgggtggactttatggagaggagtccaaacatctcctggctctttcatttccgc
ataatctctctgatgcttttgttgggcatcctggatttcctatttgtcagccatgcctac
cacagcatcctcacccggggagcctctgtccagctggtctttgggtttgagtatgccatc
ctcatgaccatggtgctcacaatcttcataaagtacattctgcattcagtcgacctgcag
agtgagaatccatgggacaacaaggcagtctacatgctgtacacggagctcttcacaggc
ttcattaaagtgttgctgtacatggccttcatgaccatcatgatcaaagtgcacactttc
cctctctttgctatccggcccatgtacctggcaatgaggcagttcaagagagctgtgact
gatgccatcatgtcacgccgcgccattcgcaacatgaacactctataccctgatgccact
ccagaagagcttcaagccatggataatgtttgtattatctgccgagaggagatggtgatg
ggcgctaaacgcctgccatgcaaccacatattccataccagctgcctgcgttcatggttc
cagcggcagcagacctgccccacctgccgcatggacgtcctccgtgcctctctccccact
cagtcccagacgccacctgagcaacaggagcaagcgcagcagcagcaacagcagccaccg
ccgcaccatactccactgatcccccagccaccgaacttcccccaaggaatcctgccccca
tttcctcctgggatgttccccctctggcctcccataggtccatttcctccagtgcctggt
gtccagccacccaacaatgcagagaatccctctgctgcttccagtgcaccctccgcttca
ggcattcagacaacagcgagtacctcgagacctgttggtgattcagcatctggatcggac
actgcccctgtgggaacagtgcctggctttcccttccctcccccgtggatgggaatggca
ttgccacctctatttggcttccctcctatgcctgtgccacccgctgggtttgctgggttg
acagacgaagagctccgtgccatggaaggacatgaccggcagcatctggaagccaggctc
cagtgtctgcagaacatccacacactcctagatgcagccatgttacagataaaccagtat
ctcaccgttctggcaaccattgggtcaccccgtcctacgcagctgccaagcagcctaaac
acttcaacctcctctcaagagacacccaccagagaatccaccactttcaattcacctgac
agtacctcttccccagggacctctccagcagtggaaccagactcgacaggtcaaacagat
gatccatctggattggtgggtgcggagggatacacagagccagctgggcatgaggaagaa
gaggagcggcctttaccgggggagcctgacacagctgagcttcgcaggcgccggcttcag
aaactggaatcctcctctcccccttcccattga
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