Chelonia mydas (green sea turtle): 102940803
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Entry
102940803 CDS
T02989
Symbol
NFKB2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X3
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04010
MAPK signaling pathway
cmy04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102940803 (NFKB2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
102940803 (NFKB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmy03000
]
102940803 (NFKB2)
Transcription factors [BR:
cmy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
102940803 (NFKB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
102940803
NCBI-ProteinID:
XP_037760989
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All DBs
Position
7:complement(54805373..54830187)
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AA seq
957 aa
AA seq
DB search
MCAEESMFRTSTRLRPGPGPGPAVQPGSAMDEPYNACLDGIDYDDFQFSSHMMEQKEPLM
ETAEGPYLIIIEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYGGVARIE
VDLVTHSDPPRVHAHSLVGKQCNEAGNCIVTVGPKDMTAQFNNLGVLHVTKKNMMEIMKD
KLKQQKIRNRNQALTESELREIEVEAKELKKVMDLSIVRLRFTAYLRDSNGNFTLPLNPV
ISDPIHDSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGWQA
FGDFSPTDVHKQYAIVFRTPPYHKPKIDRPVTVFLQLKRKRGGDVSDSKQFTYYPVVEDK
EEVERKRKKVLPQFPQHFGGGSHMGGAGGGSSGFGSGGGGNLNYPYSSGLTYNNIYSSGP
HPVGGYQGGVQMTRATKMEEEGNGKHLPAETGKQPCPPEESHWQELHHHAQLCSMRMLAL
AQRSAHALLDYSVTADPRMLLAVQRHLAASQDENGDTPLHLAIIHEQTTVIEQLIQVILS
IPNQQIINVANHLQQTPLHLAVITKQHQVVRLLLQAQADPTLLDRYGNSLLHLALQTGDE
AMLKTLLGHLDSSGPCLLSTPNYHGLLPVHLAVRVKSLACLDLLVRMGADVNAVERQGGR
TPLHLAVEMENLNVAGHLVKKLGAHVNARTFAGNTPLHLAAGLGSPILTKMLIKAGGDVF
CENDEPVRSSSSEASSDTDSGPEEQEADMELGDSDTERTDTSTAAEHRSREPGTRGARQR
RRHTPLDLTRSHKVREILLHASRQGPELEQPAAPRPETILSLDSNTLQGLEQLLNQDRRG
SDWTELARRLGLRSLVETYKDTASPSGSLLLSYELAGGSLGDLLEALDSMGLSEGVRILR
KAETADKLQSTELKEDSAYGSESVEEEQPPTPPLKSHPLPSAELLGEPPHSQQQQVH
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcagaggagtcgatgttccggactagtacacgactaaggcccggcccaggtccc
ggtcccgcagtgcagcccggctccgccatggacgagccctacaacgcgtgcctggatggg
atcgactatgacgacttccagttcagctcccacatgatggagcagaaggagccgctgatg
gagacggccgaaggtccgtatctcatcatcatcgagcagcccaaacagcgcgggttccgg
ttccggtacggctgtgaaggcccctcacatggtgggttgcctggagcatccagtgagaag
ggacgcaagacttaccccactgtcaagatctgcaactacggaggcgtggcacggatcgag
gtggacttggtgacccacagcgaccctccacgagtgcatgctcacagcctagtggggaag
cagtgcaacgaggctggcaattgcatcgtgaccgtgggacctaaggacatgacggcacaa
ttcaacaaccttggggtgctccacgtgaccaagaagaacatgatggagatcatgaaggac
aagctgaagcagcagaagatacgcaatagaaatcaggcactgaccgagtctgagctgcgt
gagattgaggtggaggcgaaggagctgaagaaggtgatggacctgagcatcgtgcgcctc
cgtttcactgcctacctccgtgacagcaatgggaacttcacgctgcccctcaaccctgtc
atctcagacccgatccacgacagcaagtcacctggggcttccaacctgaagatctcacgg
atggataagacggctggctcggtgcggggaggggacgaggtctacttgctgtgcgataaa
gttcagaaagatgacattgaggtgcggttctacgaggatgatgagaacggctggcaggcc
ttcggagacttctcccctacggatgttcacaagcagtacgccatcgtcttccgcacaccg
ccctaccacaagcccaagatcgaccgccccgtcactgtcttcctgcagctgaaacggaag
cgtgggggggacgtgagcgactccaagcagtttacctactacccagtggtggaagataag
gaggaggtggagaggaagcggaagaaggtgctgcctcagttcccccagcactttggtggg
ggctcacacatgggaggggccggcgggggaagcagtggctttggctctggtggaggtgga
aatctaaactatccgtactcctcggggctgacttacaacaacatctactcatctggcccc
caccctgtgggcggctaccaaggtggggtgcagatgaccagggccaccaagatggaagag
gaggggaatggcaagcacctgcctgcggagactgggaagcagccctgccctccagaggag
agccactggcaggagctgcatcaccacgcccagctctgcagtatgaggatgctggctctg
gctcagcgcagtgcccatgccctgctggactattcggtcactgctgacccacgcatgctg
ctggccgtgcagcggcacttggccgcctcccaggatgagaacggagacacgcctttgcat
cttgccatcatccatgagcagacgactgtgatcgagcagctgatccaggtcatcctcagc
atccccaaccagcagatcatcaacgtggccaaccacttgcagcagactcccttgcacctg
gcagttatcaccaagcagcaccaggtggtgaggttactgctgcaggcccaggcagacccc
accctgctggatcgctacggcaactcgctgctgcacctggcactccagacaggcgacgag
gccatgctgaagacgttgctggggcacctggactcctccggcccctgtctgctcagcaca
cccaattatcatggcttgctccccgtgcacctggctgtgagggtgaagagcctggcctgc
ctggacttgctggtgaggatgggagcagacgtgaatgccgtggagcggcaaggtggccgg
acgcccctgcacctggccgtggagatggagaacctcaacgtggccggccacctggttaag
aagctgggagcgcacgtcaatgctcggacgtttgctggaaacacccctctgcacctggct
gcaggcctgggctcccccatcctcaccaaaatgctcatcaaagcaggaggggatgtcttc
tgtgagaacgatgagccggtgaggtcgtcctcgtccgaagccagcagcgacacggacagt
gggcccgaggagcaggaggcagacatggagctgggagattcggacacagagcgcacagat
accagcaccgctgcagagcacagaagcagggagcctggcactcggggtgcaaggcagcgg
cggagacacacaccgcttgacttaaccaggagccacaaggtgcgggagatcttgctgcat
gcctcgcggcagggcccggagttggagcagcctgccgcccccaggccagagaccatcctg
tcactcgacagcaacaccctgcagggcctggagcagttactgaaccaggaccgcagaggc
tcggattggactgagctggcccggagactgggcctgcgcagccttgtggagacgtacaag
gacacagcctcccccagcgggagcctcctgctcagttatgagcttgctggcggcagcctg
ggggacttgctggaggcgctggactccatggggctcagcgagggagtgaggatacttcgc
aaagcagagactgccgacaagctgcaaagcacagagctcaaggaggacagtgcctatggg
agcgagtcagtggaagaggagcagccgccgaccccaccgctgaagtcgcacccgctgccc
tctgcagagctgcttggcgagccccctcacagccagcagcagcaggtgcattga
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