Chelonia mydas (green sea turtle): 102940958
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Entry
102940958 CDS
T02989
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X2
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmy03036
]
102940958 (CHD2)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102940958 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Myb_DNA-binding
CHDCT2
Motif
Other DBs
NCBI-GeneID:
102940958
NCBI-ProteinID:
XP_007060428
LinkDB
All DBs
Position
10:71793789..71895779
Genome browser
AA seq
1837 aa
AA seq
DB search
MMRNEDKSQGEEGSVHSNASSHSASEEASGSDSASQSESEQGSEQGSEHGSETNSSSESS
ESQSESESESTGSKSQQTPPETKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPS
RFNIKEEASSESENESPKRRGQKQMRKPGKWKREASGEEEDENGAEQGSSAESEPEQKKV
KARRPVLRRAVVKASVKKPHKPQRGKRRKKQDSSEDEDDDEDDETPKRQTRRRAAKNVSY
KEDDDFETDSDDLIEMTGEGADEQQDNSETIEKVMDIRVGKKGATGASTTVYETEANGNP
SADFDPEKDEGEVQYLIKWKSWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWL
AKVTPEDVEYFSCQQELAAELNKQYQIVERVIAVKTNKSAMGHSEFPAHSRKLSSNEPEY
LCKWMGLPYAECSWEDEALISKKFQHCIDSFNHRNNSKTIPTRDCKVLKQRPRFVALKKQ
PSYIGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFYQHQLY
GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDMMSRNTIREYEWIHSQTKRLKFNALI
TTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLLDFKSNHRLLITGTPLQNSL
KELWSLLHFIMPEKFEFWEDFEDDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKV
EQILRVEMSALQKQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEE
NERETGMEMLMSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLAIKHYP
FQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQN
DLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDN
NSGRSNSNPFNKEELTAILKFGAEDLFKEIEGEESEPQEMDIDEILRLAETRENEVSSSA
TDELLSQFKVANFATMEEEETELDERSQRDWDDIIPEEQRKKVEEEERQKELEEIYMLPR
IRSSTKKAQANDSDSDAESKRRIQRSSGSESETDDTDDDKRPKRRGRPRSVRKDTVEGFT
DAEIRRFIKAYKKFGLPLERLECIARDAELVDKSIADLKRLGELIHNSCVSAMQEYEEQL
KENPGEGKGPGKRRGPTLKISGVQVNVKSIIQHEEEFEMLHKSIPTDPEEKRKYCLTCRV
KAAHFDVDWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVETDKKPQGKQLQT
RVDYLLKLLKKDLEKKETVKDGEETKLKKRKPRVKKENKAPKVKDEHGNDLSSPRHSDNQ
SEEGEVKEDCLEKSPVKKKQKKKENKENKEKQSTTKKEKEGEKEKKKTKDKKEKAKGSET
KSGSKGKRSQGPVHITAGSEPIPIGEDEDDDLDQETFSVCKERMRPVKKALKQLDKPDKG
LTVQEQLEHTRNCLLKIGDRISECLKAYSDQEHIKLWRRNLWIFVSKFTEFDARKLHKLY
KMAHKKRSQEEEEQKKKEDMAGSKRLFRPEPSGSSRDSLMSQSHLPPNPHSQKLHLPPSH
PQQMHGHQRDNYSHPNKRHFSNADRGDWQRDRKFNYGGNSNQVWGGERHHQYEQHWYKDH
HYGDRRSRGDPHRSSGNYRPNNLSRKRPYEQYNSDRDHRGHRDYYDRHHHDSKRRRSEEF
RPQNYHQQEFRRMSDHRPPMGYHGQGPSDHYRSFHTDKSGDYKQPLPPPHSQVSDPRSPP
SQKSPHESKSPLDHRSPLDRSLEQKNNPDYNWNVRKT
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaatgaggacaaaagccaaggagaggagggttcagtacacagcaatgcatcg
agtcactcagcatctgaagaggcctctggctccgactctgcaagccaatctgaaagcgag
caggggagcgaacagggcagtgagcatggcagcgagacaaacagcagctcagagtcctcc
gaaagccaatctgaatctgaaagcgagtcaacaggttcgaaatcccagcagaccccacct
gaaaccaaagaaaaaccagccagcaagaaggaaaggatagcagatgtaaaaaagatgtgg
gaagaatatcctgatgtttatggggttaggagatcaaaccgaagcagacaagaaccatcg
cgatttaatataaaagaagaggcaagtagtgaatctgaaaatgaaagcccaaaaagaaga
ggccagaagcaaatgagaaaaccaggtaaatggaaaagggaggcttctggggaagaggag
gatgaaaacggtgcggagcaaggctccagtgcagaaagtgaaccagaacagaagaaagtt
aaagccaggagaccagtcctgagaagagcagtggtcaaagccagtgttaaaaagccccac
aagccccagcgtggtaagaggagaaagaaacaagactcgtctgaagatgaagatgatgat
gaagacgatgagactcccaaaaggcaaacccggcgcagagcggctaaaaatgtcagttac
aaagaagatgatgattttgagacggattccgatgacctgattgagatgaccggggaaggg
gccgacgaacagcaggacaacagcgagaccattgagaaagtcatggacatcagggttgga
aagaaaggagccactggtgcttctaccactgtgtatgagactgaggccaacggcaacccc
agcgctgactttgaccctgaaaaggatgagggagaggttcaatacttgatcaagtggaag
agctggtcgtacattcacagcacgtgggagagtgaagagtccctgcagcagcagaaggtg
aagggcctgaaaaaactagagaacttcaagaaaaaagaggatgaaatcaaacaatggcta
gccaaggtaactcctgaagatgtggaatacttcagctgccaacaggagcttgctgcagag
ttgaacaaacagtatcagatagtggagagagtgatcgctgtgaagaccaacaagtctgca
atgggacattctgagttcccagctcacagtcggaaattgtcctctaatgagcctgaatat
ttgtgcaagtggatggggttgccgtatgcagagtgcagctgggaagacgaggccttgatt
agcaagaaatttcaacactgcattgacagcttcaaccatcgcaacaactccaaaaccatt
cccactcgggactgcaaggtgttgaagcagagacccaggtttgttgctttgaagaaacag
ccttcttacattggtggcgagaacctggagctccgagattaccagctggaggggctcaac
tggcttgctcactcgtggtgcaagaacaacagcgtgatcttggctgatgaaatgggcttg
gggaagactatccagacaatatcatttctctcctatctcttctatcagcatcagctgtat
ggcccctttctgatagtggtgcccttgtctactctgacttcgtggcagagggagtttgaa
atctgggcaccagagattaatgtggtcgtttacataggagacatgatgagtagaaatacg
atccgtgaatatgagtggatccattctcagactaaaaggctgaagttcaatgcacttatc
acaacatatgagatcctcctcaaagataagactgttctgggcagcattaattgggccttt
ctgggtgtggacgaagcccatcggttgaagaacgatgactctttgctgtataaaactctg
cttgatttcaagtccaaccacaggctcctgatcactgggaccccgcttcagaattctctc
aaagagctctggtcactgctgcactttatcatgccggagaagtttgagttctgggaggat
tttgaagatgatcatgggaaagggagagagaatggctaccagagccttcacaaagtcctg
gagcctttccttctgcgcagggtgaagaaggatgtggagaaatccctgccggccaaagtg
gagcagattctccgggtggaaatgtctgcccttcagaagcagtattataagtggattttg
acaagaaattacaaggctctctcgaaggggacaagaggaagcacgtctggcttccttaac
attgtgatggagctgaaaaaatgctgtaaccattgctatctcattaaacctccggaagaa
aacgaaagggagactggcatggaaatgctgatgtctctgatcaggagcagtggaaagcta
attctcttggacaaactgctgaccaggctgcgtgagagaggtaacagagtcctgatcttc
tcccagatggtgaggatgctggacatcttggcagaatacttggctatcaagcactaccct
ttccagcgcttggacggctcaatcaaaggggagatccgaaagcaagctctggatcacttc
aacgcagaaggctctgaggacttctgtttcttgctgtcaacacgagctggcggactggga
attaacctggcttctgcagacactgtggttatctttgactcggactggaacccccagaat
gacttgcaggctcaggctcgggctcaccgaattggacagaagaagcaggtgaacatttac
cgcttagtcacaaaggggacagtggaagaggagatcatcgaaagggctaagaaaaagatg
gtgttagatcatctggtgatccagcgtatggacaccacgggccgtactgtactggataac
aactctgggagatccaactcaaatcctttcaacaaagaggagttgacagctattctgaag
tttggagctgaggatctcttcaaggagattgaaggggaagaatcggagccacaggaaatg
gatattgatgagattttacgcctggctgaaacacgagagaacgaagtgtcctcgagcgcc
acggatgagcttctgtctcaattcaaggtagccaattttgcaaccatggaggaggaagag
actgagctggacgagaggtcccagagggactgggatgatattattcctgaagagcaaagg
aagaaagtggaggaggaggaacgacagaaggagttggaagaaatctatatgttgcccaga
atccgcagctccactaaaaaggctcaggcaaatgacagtgattctgatgctgaatcaaag
agaaggatacaaaggtcatctggatcagagagtgagacggacgataccgatgacgataaa
aggccgaagcgccgggggcgcccacggagcgttaggaaagacacggtggaaggatttact
gatgccgaaatcaggaggtttatcaaggcttataagaagtttgggcttccactcgaacgg
ctggagtgcattgctcgcgatgccgagctggtggacaagtccatagctgatctgaaacgt
ctaggggaacttattcacaacagctgtgtgtcggcaatgcaggaatatgaggagcagctg
aaagaaaaccccggtgaggggaaagggcctgggaaaaggaggggtcctaccctcaagatc
tctggtgtccaagtcaacgtgaaatccatcatccagcatgaagaagagtttgaaatgctg
cacaaatccattcccacggacccggaggagaagagaaagtactgcctgacctgccgcgtc
aaagctgctcattttgatgtagactggggagtggaggatgattctcgtttattgctggga
atttatgaacatggctacggaaactgggagctaattaaaacggacccagaactgaagtta
actgataagatcctacctgttgagacagataagaagcctcagggaaagcagctccagacc
cgtgtcgattatctgctgaaattgctgaagaaagatctggagaagaaggaaaccgtgaaa
gatggggaagagaccaaactgaagaagaggaaaccacgcgtgaagaaagagaacaaagct
cccaaagtcaaagatgagcatggaaatgacctgtcctctcctcggcactcggacaaccag
tcagaagagggtgaagtcaaggaggattgcttggaaaagagcccagtgaaaaagaaacag
aagaagaaagagaacaaagagaacaaggaaaaacagtcaaccacaaagaaagaaaaggaa
ggcgaaaaagagaaaaagaaaacaaaggataagaaggagaaggccaaaggtagtgagacc
aagtctggaagcaaagggaagcgatctcaaggtcctgtccacattacagcagggagtgag
cccatccccattggagaagatgaggatgatgacctggaccaggaaacgttcagcgtatgc
aaagagaggatgaggccagtgaaaaaggcactgaagcaactggacaagccagataaggga
ctgacagtgcaagaacagctggagcatactcgcaactgcctcctgaaaattggcgatcgc
atctcagagtgccttaaagcctactctgaccaggagcacatcaaactgtggagaaggaac
ctctggatatttgtgtccaagttcacagaatttgatgccagaaaattgcacaaactctac
aaaatggctcacaaaaaaagatcccaggaagaggaggagcagaagaagaaggaagacatg
gctggcagcaaaaggctatttcgcccagagccttctggctccagccgggattccctcatg
tcccagtctcacctgcctcccaatcctcattctcaaaaactccacctgcccccctcgcac
cctcagcagatgcacgggcaccagcgggacaactacagtcaccctaacaagagacacttc
agtaacgcagatcgaggagactggcagagagatcggaaatttaactatggtggcaacagc
aaccaggtctggggtggagagcggcatcaccagtacgagcagcactggtacaaggatcac
cactacggggatcgtcggtctcgtggcgaccctcaccgaagctccgggaattaccgacca
aataacctctcccgcaagaggccgtatgagcagtacaacagtgaccgagaccacagggga
cacagagattattacgacagacaccatcacgattccaagcggcgaagatctgaggagttc
aggccccagaactaccaccagcaggaattcagaagaatgtctgatcacaggccacccatg
ggataccacggccagggaccttcggaccattaccggtccttccatacagacaaatcgggg
gattacaaacaaccgcttccccctcctcactcccaagtctcggaccctcgctcacccccg
tctcagaaatcccctcatgagtccaagtcacccctggatcacaggtcgcccctggacagg
tcattagaacagaaaaacaatccagattataactggaatgttcgaaaaacataa
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