Chelonia mydas (green sea turtle): 102941002
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Entry
102941002 CDS
T02989
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102941002 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmy03400
]
102941002 (APEX1)
Enzymes [BR:
cmy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
102941002 (APEX1)
DNA repair and recombination proteins [BR:
cmy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
102941002 (APEX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
102941002
NCBI-ProteinID:
XP_007072046
UniProt:
M7AIU0
LinkDB
All DBs
Position
13:34932348..34937682
Genome browser
AA seq
318 aa
AA seq
DB search
MPKRGKKAEDVDSTDEFKATEPGAKKSKKGAAKGPKEKVAEGPILYQDPPDKLTSPGGQK
YTLKVTSWNVDGLRAWVKKKGLEWVREEDPDVLCLQETKCAEKLLPPEMREMPEYPHKYW
ACAGTKEGYSGVALLCKREPLSITYGIGEEEHDQEGRVITAEFPSHFLVTAYVPNAGRGL
VRLEYRQRWDAAFRAYLQGLDARKPLVLCGDLNVAHAEIDLKNPKGNKKSAGFTPEERQG
FGELLAAGFTDTFRHLYPDTPHAYTFWTYMMNARAKNVGWRLDYFLVSMRLLGALCDSKI
RSQAMGSDHCPVTLYMAL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgggggaagaaggcagaggatgtggacagcacggacgagttcaaggccaca
gagcctggggcaaagaagagcaagaagggggcagcgaagggccccaaggagaaggtggcg
gagggccccatcctgtaccaggatccgcccgacaagctcacctcccccggtgggcagaag
tacaccctgaaggtcacatcgtggaacgtggatgggctgcgggcctgggtcaagaagaag
ggcctggagtgggtgcgtgaggaggaccccgacgtactgtgcctgcaggagaccaagtgt
gcagagaagctgctgccccccgagatgcgggagatgcccgagtatccccacaagtactgg
gcctgcgccggcaccaaggagggctacagcggggtggctctgctctgcaaaagagaaccg
ctcagcatcacctacggcattggcgaggaggagcacgaccaggagggccgtgtgatcacg
gccgagttcccctcgcacttcctggtgacggcctacgtgcccaacgcgggccgggggctg
gtgaggctggagtaccgccagcgctgggatgccgccttccgggcttatctgcaggggctg
gatgctcgcaagcccctggtgctctgcggggatctaaacgtggcccacgccgagatcgac
ctgaagaaccccaagggcaacaagaagtcggcaggcttcacgcccgaggagcgccagggc
tttggggagctgctggcagctggcttcactgacaccttccgccacctctatcctgacacg
ccccacgcctacaccttctggacctacatgatgaatgcccgtgccaagaacgtgggctgg
cgcctcgactacttcctggtctcaatgcgcctgctgggggcgctgtgcgacagcaagatc
cgctcccaggccatgggcagtgaccactgccccgtcaccctctacatggccctgtga
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