Chelonia mydas (green sea turtle): 102941031
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Entry
102941031 CDS
T02989
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmy03021
]
102941031 (SUPT6H)
03036 Chromosome and associated proteins [BR:
cmy03036
]
102941031 (SUPT6H)
Transcription machinery [BR:
cmy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
102941031 (SUPT6H)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
102941031 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
102941031
NCBI-ProteinID:
XP_037736111
LinkDB
All DBs
Position
17:1448971..1489382
Genome browser
AA seq
1722 aa
AA seq
DB search
MSDFVESEAEESEEEYNDDGEVVPRVNKKFVEEEDDEEEEEENLDDQDEQGNLKGFINDD
DDEEEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVRK
MSDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVDAPIAPPEEEEEDEEDESDID
DFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEYEY
EDEEAEGEIRVRPKKTAKKRISRRSIFEMYEPSELESSHLTDQDNEIRVTDMPERFQLRS
IPVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQASSSFSRKGPSTIQKIKEA
LNFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQA
YQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAA
KASRKKHKRMREDGEEAEGEGEDAEDEEQKGPELKQASRRDMYTICQTAGLDGLAKKFGL
TPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREPL
VRQVLRQTFQERAKLNIAPTKKGKKDVDEAHYAYSCKYLKNKPVKELRDDQFLKICLAEE
EGLLSIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQFL
YVQMAKELKNKLLVEAKEYVIKACSRKLYNWLKVSPYRPDQQVEEDDDFMDENQGKGIRV
LGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEERDKKAQDIETLKKFLL
NKKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSRKSEN
EFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALYCE
FINRVNEVGVDVNRAIAHPYSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMC
HMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAE
DANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTPY
RSPNTEEVFNMLTKETPETFYIGKMITCNVTGIAHRRPQGESYDQAIRNDETGLWQCPFC
QQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGM
TVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDAEAADHKQEEDYKRKQQ
RTTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQHV
DVREEGKENAFSLGSTLWINTEEFEDLDEIVARYVQPMASFARDLLSHKYYQDCSGGDRK
KLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIF
PTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTS
QMFSAIAAVTGQGQNPSATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPSY
SYTTPSQPITTPQYHQLQASTTPQSTQSQPSSSSRQRQQPKSNSHAAIDWGKMAEQWLQE
KEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtagagagcgaggctgaggagtcggaggaggaatacaacgatgatggg
gaggttgttccgagagtaaacaagaaatttgtggaagaggaagatgatgaagaagaggag
gaggagaatcttgatgatcaagatgagcaggggaacctaaagggattcattaatgatgat
gatgatgaggaagaggaggaggaggaagaggcaagcgactctggcgattcggaggacgat
gttggccacaaaaagagaaaacgcactttcgacgaccgtctggaggatgacgattttgac
ctcattgaagagaatttgggtgtcaaagtcaaaagacaaaaattcaggcgtgtgcgaaaa
atgtcagatgatgaggatgatgaagaggaggattatgggaaggaggaacatgagaaggaa
gccattgctgaagaaatcttccaggatggagaaggggaagaggggggcgaggctgtcgat
gctcccatagctcccccagaagaagaggaagaggatgaggaagatgaatctgacatcgac
gacttcattgtggatgatgatgggcaacctctgaagaagccaaagtggcggaagaagctc
cctggctacacggatgctgctttgcaagaggctcaggagatcttcggcgtggactttgac
tatgatgaatttgagaagtacaatgagtatgatgaggagctggaggaggaatatgagtac
gaggatgaggaggctgaaggggagatccgtgtccgacccaaaaagactgccaagaagcgc
atcagtcgacgtagcatctttgagatgtacgagcccagtgagctggagagcagtcacctg
acagaccaggacaatgagatccgcgtgaccgacatgccagagaggttccagctgcgctcc
atccctgtgaagagtgctgaagatgatgaattggaggaagaagctgactggatctacagg
aatgcctttgccacacctaccatctcgctgcaggaaagttctgattacttggaccggggc
caggccagtagcagcttcagccgcaaggggcccagcaccatacagaagattaaagaagcc
ctgaatttcatgaggaatcagcactttgaggtcccattcatcgccttctaccgaaaggag
tatgtagagccggagctgcacatcaatgacctctggagggtctggcagtgggatgaaaag
tggacccagctaaaaatccgcaagcagaacctgacccgtctgtttgagaagatgcaggcc
tatcagtacgagcaaatctctgctgatccggacaaacctttggctgatgggataagggcg
cttgataccactgacatggagaggctgaaggacgtgcagtccatggatgagctgaaggat
gtgtataaccatttcttgctgtactacgggcgagacatccccaagatgcagaatgctgcc
aaagccagccgaaagaagcataaacgaatgcgggaggatggtgaagaggccgaaggtgaa
ggagaggatgcagaagatgaggagcagaaggggcccgagctgaagcaggcatcccgcagg
gatatgtacaccatctgtcaaaccgctggactggacggcctggctaagaagtttggtctg
acgccggagcagtttggagagaatctccgggacagttaccagcgtcatgagacagagcag
ttcccagcagagccgctggagctggccaaggattacgtgtgtagtcagttcccgacccct
gaggctgtgctggaaggagcccgctacatggtggccttgcagatagcccgagagccgctc
gtcaggcaggtcctgagacagactttccaagagagagcgaaactcaacattgcgccgacc
aagaagggtaaaaaggatgttgatgaagcccactatgcgtattcctgtaagtacctgaag
aacaagcctgtgaaggagctgcgagatgaccagtttctgaaaatctgcctggctgaggag
gaggggctgctgagcatcgacatcagtattgacatgaaaggcgttgaggggtatggtagt
gaccagacgtattttgaggaaatcaagcagttttattaccgggacgagttcagccaccag
gtgcaggagtggaatcgtcagcgcacaatggccatcgaacgttccctcaaccagttcctc
tacgtgcagatggctaaagagctgaagaacaagctgctggttgaggccaaagagtacgtc
attaaggcttgcagccggaagctgtacaactggctaaaggtgtctccctaccgtccagac
cagcaggtggaggaagacgacgatttcatggatgaaaatcaggggaagggaattcgggtg
ctgggcattgcattctcctctgccagagaccaccccgtgttctgtgccctggttaatggc
gaaggcgaggttacagacttcctccggctgccgcacttcaccaaaagacggaacgcctgg
cgggaggaggagcgggacaagaaggcccaggatatcgaaactctgaaaaaattccttctg
aacaagaagcctcatgtggtgacaattgcaggagagaacagggatgcccagatgttgatg
gaggacgtcaagcggattgtgcatgaactggatcaggggcagcagctgtcttccattgga
gtggagctagtggacaatgagctggccattctctacatgaacagcaggaagtcagagaat
gagttccgggattacccccctgtgctgcgccaagctgtctccctggctcgccgcattcag
gaccccctgatcgagtttgctcaggtctgcagctctgatgaggatatcctgtgtctgaag
cttcaccctctgcaggaacacgtggtgaaggaggagctgctgaatgctctctactgcgag
ttcataaaccgtgtgaatgaggtgggagtggacgtaaatcgggcaattgctcacccttac
agccaggccctgctacagtatgtttgtggcctggggccacgcaaagggactcacctgctc
aagatcctgaaacaaaacaacacaaggctggagaaccggactcagctagtcaccatgtgt
cacatgggacccaaggtcttcatcaattgtgctggtttcatcaaaattgacacagcatcg
ctgggtgacagcacggattcctacatcgaggtcctagatgggtccagggtccaccctgaa
acctacgaatgggcaagaaaaatggcagtggatgccctagagtacgatgaatcagcagag
gatgccaatccagctggcgctctagaggagatcctggaaaacccagagcgtctgaaagac
ctggatcttgatgcctttgctgaagagctggagagacagggttacggggacaaacacatc
acgctgtacgacatccgagctgagctgagttgcagatacaaggatctgagaaccccgtac
cgttctcctaacacggaggaggtcttcaatatgctgaccaaagaaacaccagagaccttc
tacataggtaaaatgatcacctgcaacgtgactgggatagcccataggaggccccaaggc
gaaagctacgatcaggccatacggaatgacgagactggcctctggcaatgtcccttctgt
cagcaggataacttcccggagctcagtgaggtttggaatcactttgacagtggctcctgc
cctggccaggctattggggtgaagacacggctggacaatggggtcactggctttatacca
accaagtttctcagcgacaaggtggttaagcggccagaagaaagggtgaaggtaggaatg
actgttcactgtaggatcatgaagatagacattgagaagttcagtgcagacctgacctgc
aggacgtcagacctgatggataagaacaatgaatggaagctgcccaaagacacttactat
gactttgatgctgaggcagcagatcacaagcaggaagaagactacaagaggaaacagcag
cgcacaacatacatcaagagggtgatcgctcacccgtcattccataatatcagcttcaag
caagccgagaagatgatggagaccatggaccaaggggacgtgatcatccggccaagcagc
aagggggagaaccacctgactgtcacctggaaggtgaacgatgggatttaccagcatgtg
gatgtccgagaggagggcaaggagaacgccttcagtttgggctccaccctttggattaac
acagaggaattcgaggacctggatgaaatcgtcgctcgctatgtccaaccaatggcgtct
tttgctagagacctgctgagtcacaaatactaccaagactgcagtggtggagacaggaag
aaactggaagaacttctaataaagaccaagaaggagaagccaacctttattccttacttc
atctgtgcctgtaaagagctacctggcaaattccttctcggataccagcctcgagggaaa
ccgaggatagagtatgtgacggtaacgccagagggattccggtaccggggacagatcttc
cctacagtgaatgggctcttccggtggtttaaggatcattatcaggacccagtgccaggt
atcaccccgagcagcagcagcaggacccggacccccgcctccatcaatgctactcctgct
aacattaacctagctgatctgacccgagccgtgaacgcgctgccacagaacatgacctca
cagatgttcagtgccatcgccgcggtgacgggccaagggcagaaccccagtgccacgcct
gcacagtgggcatccagccagtatggctacggaggcagcggagggggcagcagcgcgtat
cacgtctttacaactccagcacagcagccagtggccacccctctgatgacccccagctac
tcctacacaacccccagccagccaattacaacccctcagtatcatcagctccaggccagt
actacaccccagtccacgcagtcgcagccatcatccagttccaggcagaggcagcagccg
aagtccaacagccacgctgcaatcgactgggggaaaatggccgagcagtggctccaggag
aaggaggctgagcggaggaaacagaagcagaggctgacccctcgtccatctcccagcccc
atgatcgagagcacgcccatgtccattgctggggacgccacaccacttctggatgaaatg
gatcgatag
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integrated database retrieval system
