Chelonia mydas (green sea turtle): 102941061
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Entry
102941061 CDS
T02989
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102941061 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102941061 (NUP54)
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102941061 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
102941061
NCBI-ProteinID:
XP_037752643
LinkDB
All DBs
Position
4:complement(15001243..15039530)
Genome browser
AA seq
500 aa
AA seq
DB search
MAFNFGAAAGAAAANPTGAFGGFGTTTTAPGSVFSFSAPTNTGSAGLFGATQNKGFGFGT
GFGGAGTGTGLGTGLGTGLGFGGFSTQQQQPTLGGLFSQPTQAPSHSNQLINTASALSAP
TLLGDERDAILAKWNQLQAFWGAGKGYFNSNIAPVEFTQENPFCRFKAVGYSCMPNNKDE
DGLVVLVFNRKEADIRNQQQQLVESLHKILGGNQTLTVNVEGVKTLPDDQTEVVIYVVER
SPNGTSRRVPATTLYAHFEQVNIKTSLQQLGVTLSMARTELSPAQIKQLLQNPPAGVDPI
IWEQAKVDNPDPEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQTT
TMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPTQF
KGRLNELMSQIRMQNHFGAVRAEERYYIDADLLQEIKQHLKQQQEGLSHLISIIKDDLED
LKLTEHGLNESIPIRGGIFS
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaacttcggggcagctgctggcgccgccgccgcgaacccgacaggtgctttt
ggaggatttgggacaactaccaccgctcctggatcagtatttagcttttctgctcctacc
aacacaggctccgctggactgtttggtgctacccaaaacaaaggttttggatttggtact
ggttttggcggagcaggaactggtacgggcctaggtactggtttaggaactgggttaggc
tttggaggattcagtacccaacagcagcagcccacattaggtggcttgttcagtcagccc
acgcaggcaccttcccattccaaccagctgataaacacagccagtgcactttctgctccc
actctcttgggagatgagcgagatgctattttggcaaagtggaaccagttgcaagccttc
tggggggcaggcaaaggatattttaacagcaacattgctccggtggaattcacgcaggaa
aacccattttgcagatttaaggctgtgggctacagttgcatgcccaacaacaaggatgaa
gatggcctggtggtcttagtcttcaatagaaaagaagcagacattcgaaaccagcagcag
cagctagtagaatcactgcacaaaattttgggaggaaaccagacccttacggtcaacgta
gaaggtgttaaaacactgccagatgaccagactgaagttgtcatttatgttgttgagcgg
tcaccaaatgggacttcaaggagagttccagccacaaccctgtacgctcattttgaacaa
gttaacataaaaacatcactgcagcagcttggagttaccctttccatggccagaacagaa
ctttctccagcacaaatcaaacagcttctacagaatcctcctgctggcgttgatcctatt
atctgggaacaggccaaagtggataatcctgatcctgaaaagcttatccctgtaccaatg
gtaggtttcaaagagctgttgagaagattaaaggtccaagaccagatgactaagcagcat
cagaccagattagatataatatcagaagatattagtgagctgcagaaaaatcagaccaca
actatggcaaaaatcgcacagtacaagaggaaactaatggacctttctcatagaacctta
caggtgttaattaaacaagagatacaaaggaaaagtggctatgccattcaggctgatgag
gaacaacttcgtgtacagttagacaccattcaatgtgaactcaatgcacctactcagttc
aagggtcgcctaaatgaactgatgtctcagatcaggatgcaaaatcattttggagcagtt
agggcagaagaaaggtactacattgatgcagatctcttacaagaaatcaagcaacatttg
aagcagcaacaagaaggcctgagtcatttgattagcataataaaagatgacctggaagat
ctaaaactaacagaacatggattgaatgagagcatccctatcagaggaggaatcttcagt
tga
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