Chelonia mydas (green sea turtle): 102941253
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Entry
102941253 CDS
T02989
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102941253 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmy04121
]
102941253 (TRIM54)
Ubiquitin system [BR:
cmy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102941253 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-B_box
RING_XB3-XBAT31
zf-C3HC4
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
UvrD_C
Sina_RING
CagA
DUF1664
Spectrin
PAH_ZNF598
Zn_ribbon_FGT1_2
FlgN
Hydro_N_hd
Exonuc_VII_L
DUF4363
DUF2884
Spectrin_Anc-1_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
102941253
NCBI-ProteinID:
XP_037749544
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All DBs
Position
3:984505..1003613
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AA seq
382 aa
AA seq
DB search
MNFAVGFKPMLGDSHSMDSLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQASNP
LWQSRGSSSVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPLHAKA
EQQLMCEEHEDEKINIYCLTCEAPTCSLCKVFGAHKDCEVAPLPSVYKHQKSELSDGVAM
LVAGNDRIQAIVTQMEEICKAIEENSRRQKQHLCQRFDSLCSSLEERKKELVQRISREQE
ERVSHVRSLIRQYGEHLEIASKLVESAIQAMEEPQMAAYLQQSKELLKKITDMSKVSMSS
RPEPGYEKMDHFFVNVDYLAEMLRTIEFQTDSLGEDDSDGFAGGDGGDAGADEDRPEGPE
ALEGAEAVGPRQKPSSSPHGQH
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgcggtgggcttcaagcccatgctgggggactcgcacagcatggacagcctg
gagaagcagctgatctgccccatctgcctggagatgttcaccaagcccgtggtcatcctg
ccctgccagcacaacctctgccgcaagtgcgccaacgacatcttccaggcttccaacccg
ctgtggcagtcgcggggctcgagctcggtgtcgtcgggggggcggttccggtgcccctcc
tgccggcacgaggtcgtcctagaccggcacggcgtctacgggctgcagcgcaacctgctc
gtggagaacatcatcgacatctacaagcaggagtccaccaggcccctgcacgccaaggca
gagcagcagctgatgtgtgaggagcacgaggacgagaagatcaacatctactgcctgacc
tgcgaggcgcccacctgctccctgtgcaaggtgttcggggcccacaaggactgcgaggtg
gccccgctgcccagcgtctacaagcatcagaagagcgagctgagcgacggggtcgccatg
ctggtggctgggaacgaccgcatccaggccatcgtgacccagatggaggagatctgcaag
gccatcgaggagaacagtcggcggcagaagcagcatctctgccagcgcttcgactccctg
tgcagctccctggaggagcgtaagaaggagctggtgcagcgcatcagccgggagcaggag
gagcgggtgagccacgtgcgctccctcatccgccagtacggggagcacctggagatcgcc
tccaagctggtggagtcggccatccaggccatggaggagccccagatggctgcgtacctg
cagcaatccaaggagctgcttaaaaagatcacagacatgtcgaaggtgtcgatgagcagc
cgcccggagcccggctacgagaagatggaccacttctttgtcaatgtggactacctggcc
gagatgctgagaaccatcgaattccagacagactcgctgggtgaggacgactcggacggg
tttgcaggcggggatggaggagatgctggagccgacgaggacaggccagaggggccagag
gcgctagagggggccgaagcagtggggcccaggcagaagccatcgagctccccgcatggt
cagcattga
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