Chelonia mydas (green sea turtle): 102941617
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Entry
102941617 CDS
T02989
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04142
Lysosome
cmy04144
Endocytosis
cmy05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102941617
04142 Lysosome
102941617
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102941617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmy04131
]
102941617
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmy04147
]
102941617
Membrane trafficking [BR:
cmy04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
102941617
Exosome [BR:
cmy04147
]
Exosomal proteins
Proteins found in most exosomes
102941617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
Gp18_dom_I
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
102941617
NCBI-ProteinID:
XP_037734664
LinkDB
All DBs
Position
15:complement(14685824..14744654)
Genome browser
AA seq
1680 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTT
PIRRPISAESAIMNPASKVIALKDAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWISVNTV
ALVTETAVFHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAAFAEFKIEGNSKPSTLFCFAVRSPAGGKLHVIEVGQPAAG
NQPFVKKAVDVFFPPEAQTDFPVAMQIGTKHGVIYLITKYGYIHMYDLESGVCIYMNRIS
ADTIFVTAPHEPSSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAG
AEELFARKFNTLFAQGSYAEAAKVAASAPKGILRTSDTIRKFQSVPAQPGQASPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVSPEQGLQFSQMLVQD
EEPLANINQIVDVFMENSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAI
LGNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIV
NFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVIGGLLDVDCSEDVIKNLIMVVRGQ
FSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSCVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANV
LEENSPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNT
SAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYME
VVQAAGRNNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLSELEEFVSGPNNAHIQ
QVGDRCYEEGMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFA
CVDGKEFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMM
NHPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVSFF
SKVNQLPLVKPYLRSVQNHNNKGVNEALNNLLTEEEDYQGLRASIDAYDNFDNITLAQRL
EKHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDAELAEKLLQWFLE
EGKQECFAASLFACYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDGLFNKVDK
LDASESLRKEEEQVAEPTPIVFGQQLMLTAGPSAVPPQANFPYGYTAPGFTQPPVYGFNM
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcctgcccattcgcttccaggagcacttccagctccaaaacttgggaatt
aacccagcaaacattggatttagcaccctgacaatggaatctgataaattcatctgcatc
agagagaaagtaggggaacaagcacaggtagtgataatcgacatgagtgatccaactaca
cccatcagacgtccaatttctgcagaaagtgccatcatgaatcccgcttctaaagtcatt
gctctaaaagatgcggggaagacgcttcagatctttaacattgagatgaaaagtaaaatg
aaagcccatactatggcagaggaagtgatcttttggaagtggatatcggtaaacacagtt
gccttggtgacagagacggcagtctttcattggagcatggagggagaatctcagccccaa
aagatgtttgacaggcatgctagtcttgcaggctgccaaatcatcaactacaggacagat
gaacaccaaaaatggctactcctaataggaatttcagcccagcaaaatcgtgtggttggt
gcaatgcaattgtactcagttgataggaaggtttcccaacctatagagggtcatgcagca
gcctttgcagaattcaaaatagaaggaaactccaaaccttccacgctcttctgttttgct
gtgcggagcccagcaggaggcaagctgcatgtaattgaagtaggtcaacctgctgctgga
aaccagccctttgtaaagaaagctgtcgatgtgtttttccctcctgaggctcagacagac
ttccctgtggcaatgcagattggaactaagcatggcgttatctacctgatcacaaagtat
ggatacattcacatgtatgacttggaatctggagtgtgtatttacatgaaccgtattagt
gctgacacaatctttgtaactgctcctcatgaaccttcctctggcattattggtgtgaat
aaaaaaggacaggtgctttcagtttgtgttgaagaagataacatcgtgaactatgctaca
aatgttctccagaatccagacctgggtctgcgtatggctatccgcagtaacctggctggg
gcagaggaactgtttgccagaaagttcaatacgctctttgcacaaggaagctatgcagaa
gctgctaaagtggcagcatctgcaccaaagggaatcctgcgtaccagtgatactatcagg
aagttccagagtgtaccagcccagcctgggcaggcctctcctttgctgcagtattttggt
atcttgcttgatcaagggcaacttaacaaatttgaatctttagaactctgccgtccagtc
ctgcaacaagggcgcaagcagctcctggagaaatggctgaaggaagataagctggagtgc
tctgaggagctaggagacctggtgaagacagctgatccaacccttgcactcagtgtttac
cttcgtgctaatgtgccaaacaaagtcattcagtgctttgcagaaactggtcaattccag
aaaatagtgctctatgccaaaaaggttggctacacaccagactggatcttcttgttgaga
agtgtgatgagagtcagcccagaacagggactgcagttctctcagatgctggtgcaggat
gaggagcccctggctaatattaaccagattgtagatgtattcatggagaacagtctcatt
cagcagtgcacttcctttttgttggatgctttgaagaataatcgccctgctgaaggacac
cttcagacacgtctgctggaaatgaatctgattcatgcaccacaggttgctgatgccatt
cttggaaaccagatgtttacacactatgatcgtgctcacattgcccagttatgtgaaaag
gcaggcttgctacagagagcattggagcactacactgatctctacgatataaagcgtgct
gtagttcacactcacctcttgaaccctgagtggcttgtaaacttctttggctccctgtca
gttgaggactctgtggaatgtctccgtgcgatgctatcagccaacatccgacaaaatcta
cagctctgtgtgcaagtagcttctaaataccatgagcagcttggcacccagtctctcgtg
gagctctttgaatctttcaaaagttatgaaggattgttttatttcctgggttctattgtg
aacttcagccaggatccagatgtccacttcaaatatatccaggcagcctgcaagacgggt
caaattaaagaggtggaaaggatctgccgtgaaagtaactgctataaccctgaacgagtg
aagaattttctcaaggaggccaagctcacagaccagcttcctctgatcattgtttgtgac
agatttgactttgttcatgatctggttctctacttataccgcaacaacctgcagaagtac
atagagatctatgttcagaaggtgaatccaagtcgtataccagcagtgattggagggctg
cttgatgtggattgttctgaagatgttattaagaacttgatcatggtggttagaggccag
ttctcaacggatgagctggtggctgaagtggaaaaaagaaataggcttaagttgctgctg
ccatggctggaatctagaattcatgaaggctgtgaagaacctgccacccacaacgctctg
gctaaaatctacattgacagtaacaataatcctgagcggtttctccgggagaacccatac
tatgacagctgtgttgtaggcaaatactgtgaaaaaagggaccctcatttggcctgtgtt
gcttatgagagagggcaatgtgaccttgaactcatcaaggtttgcaatgagaactccttg
ttcaagagtgaggctcgctatttggtacgcagaaaggatccagaactttgggcaaatgtc
cttgaggaaaatagtccattcagacgacagctcatcgaccaggttgtccagacagcctta
tctgaaacacaagatcctgaagaggtttctgttactgtgaaagctttcatgactgctgat
ctgcccaatgaactaattgagcttcttgagaagatagtcttggacaactctgtgttcagc
gagcataggaacctgcagaatcttctgattctgactgccattaaagctgatcgcactcgt
gtaatggagtatatcaatcgtctggataactatgatgccccagatattgcaaacatagcc
atcagtaatgagctatatgaagaagcctttgctatcttcaggaaatttgatgttaatact
tctgcaatacaggtgctgatagagcacattggcaacctggaccgtgcctatgaatttgca
gagagatgtaatgaaccagctgtatggagccaactggccagagcacagctccagaaggac
ctggtgaaggaagctattgactcctatatcaaagctgatgatccctctgcttacatggag
gttgttcaagcagctggtagaaacaataactgggaggatctggttaaattcttgcaaatg
gccagaaaaaaggccagagagtcctacgtagagactgaactgatctttgctttggcaaaa
accaatcgcctctcagagctggaagagtttgtcagtggccctaacaatgcccacattcag
caggttggagatcgctgctatgaggagggaatgtatgatgcagcaaagttgctctacaac
aatgtatctaactttgcacgcctggcatctaccttggtgcatcttggagagtaccaggcg
gcagtagacagtggccgcaaagcaaacagcaccaggacctggaaagaggtgtgctttgca
tgtgtggatggaaaggagttccgcctagcacagatatgcggcttgcacatagtaatccat
gcagatgagcttgaagagctgattagctattaccaggatcgcggctactttgaagaactg
attgccctcttggaagcagctttgggcctggagcgtgctcacatgggaatgttcacagaa
ctcgccatcttgtactccaaattcaaacctcagaagatgagggaacatctggagctcttc
tggtccagagtcaacattccaaaggtgctcagagcagcagaacaagctcacctctgggga
gaactggtcttcctttatgacaagtatgaagagtatgacaatgcaataattacaatgatg
aaccatcccaccgatgcctggaaagaagggcagttcaaagacataattgctaaggtggcc
aatgtggagctatattacaaagccctgcagttctatttggactacaaacctctgttgatc
aatgatcttctgctcgtattatctccacggctggatcataccaggacagtaagctttttc
tcaaaggttaatcagctgcctctagtgaagccttacctgcgttcagtccagaaccacaac
aacaaaggagtcaatgaggctctaaacaatctcctgacagaggaggaggattatcagggg
ttgagagcatctattgatgcatatgataactttgataacatcacactagctcagcgcttg
gagaaacatgagttgattgaatttaggcgtattgcagcctacttgtacaagggtaataat
cgttggaaacagagtgtggagctctgcaagaaggatcgtctctacaaggatgccatgcag
tatgctgcagaatccaaagatgcagagctggcagagaaactgctccagtggttcctggag
gaaggcaaacaggagtgttttgcagcctctctctttgcatgctatgacttgctgcacccg
gatgtggtccttgagctggcatggaggcataacatcatggactttgcaatgccttatttc
atccaggtgatgagggagtaccttaccaaagttgatgggctgtttaataaggtggataaa
cttgatgcttctgaaagcctaaggaaagaagaggaacaagtagctgaacccactccaata
gtatttggccagcagctaatgttaacagcaggccccagcgcagtacctccccaggccaac
ttcccgtatggatacacagctccaggattcacccagccacctgtttatggtttcaatatg
taa
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