Chelonia mydas (green sea turtle): 102941653
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Entry
102941653 CDS
T02989
Name
(RefSeq) laminin subunit beta-2 isoform X5
KO
K06243
laminin, beta 2
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04510
Focal adhesion
cmy04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102941653
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102941653
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
ATG16
Nuf2_DHR10-like
Fib_alpha
F5_F8_type_C
PMT_C3
EzrA
Motif
Other DBs
NCBI-GeneID:
102941653
NCBI-ProteinID:
XP_037760843
LinkDB
All DBs
Position
7:1171320..1224886
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AA seq
1853 aa
AA seq
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MTARGSRGRPVICTGLSREAGPSVPMELLVALLLLVQVPGAASQEEPGCSAGSCHPATGN
LLVGRAQNLSATSTCGLQGPQEYCIVSHLQDSEKCFSCDSRSPSLRTSHRIQNVVYLGGQ
DGHATWWQSENGVEHVSIRLDLEAEFHFTHLIMKFKTFRPAAMLIERSANFGRTWKVYRY
FAYNCSRLFPAVAVQASGRVDEVLCEQRYSEIEPSSHGEVIFKVLDPSIPVEDPYSPAIQ
DLLRVTNLRVNLTKLHTLGDNLLDSRRQVLRKYYYALYELVLRGSCFCYGHASECAPAPG
LPAGVEGMIHGRCVCKHHTAGLNCERCQDFYQELPWRPAGSTDPHACQGCNCNQHSRRCH
FDMAVYLATGNASGGVCDDCQHNTMGRSCQLCKPFYYHSPLADIRASTACVPCDCDPVGS
LDGGVCDSHTDVALGMIAGQCRCKEHVQGVRCDSCKEAFYGLSRTDPQGCQPCRCDPRGI
LTGSPPCDHVSGDCYCKRFVSGRYCSQCLPEFWGLSTDVAGCRPCACDFGGAYSNRCSME
DGLCPCRPHLIGRQCDQVQPGYFCAPLDYYSYEAEHATGHAPTHPTLPGALRPEAPSDCL
EHSRGLPNGRKGRLRRQRGTMRLRQHRALPRRSRQPQHKPDVEVVSREHVGHMITWTGPG
FARVRDGAGLSFHIDNIPYAMEYDILIRYEPESTEDWEAIVSVSAQALPTSPRCGNVLPS
EQRYKESLPHTERYALLSRPFCFEPSNQYEIAMRFQRAGVVQRHPAAFILIDSLVLLPRV
LELPAFRGSEPAAVQHREELERYTCQEAFRMATMPALAEMCARLLCSISALLHDGALACQ
CDPQGSTSSVCQPVGGQCPCKPHVIGRRCDQCAPGTYGLGPSGCSRCACSPEGSVSKLCD
PVSGQCRCQPGAVGRRCDQCSWGQWGFPACRPCHCNGHSAECDPHTGACQGCRDATTGPH
CERCLEGYYGDPVLGSGQQCRPCPCPGYPGTQHYHGNSCHADKETNQIVCLCAPGYTGPR
CDRCSPGYFGAPGPGGGGCRPCQCNNNIDPSDPGACDPRSGQCLRCLHHTDGPRCAACRP
GYHGHAPQRTCRRCTCNQLGTLPAHCASGTCYCDQLTGSCPCRVHVVGKNCDQCAPGFWS
FGGEQGCEPCSCHPAHSLQQGCNMFTGQCPCRPGFGGRTCADCQEEHWGEPERECMACDC
HPAGVESLQCERLSGRCACRTGFTGQRCDHCQRGFQDNFPRCDRCPPCFAQWDLALDRLH
DRLRQLQGQARALQEGGPGPEFSNSRLQDLESKLRSTERLVGDGSSQGAPLLRQLGRRLD
GTRKDMDEVWKQLQAVEGRLDEPAGADAEQRGRLASLSRELRELNLTLSHQQEQLARWEG
ASFGESYRSIRASSERSRQAAQRASASVQGPASLVGQAQRTRQAAEGLLRDTGDTFRRSL
AAQRRSLREAQKRAAVLSVSRLNERICGAQGDQGCEQAPCGGASCQDDSGQRRCGGPGCR
GALPISMQALRTAQDVSRQLESTVGQLGTITLKVQEIQELARGARRRAQDTLDGSQTARG
HMEESTARLREFIQKIKDFLAEEGADPESIELVAQQVLNISLPSSPSRIRHLLQEIQDSI
RQLDGVDAVLNSTAHSLATTQELLTRAGQAREQAVGVRGVITATQEVLAGAKVQVSVAGR
ALKSTKKAVRGVENRVKEAERRLQGLQEKESRALSALQELATHVAALQNKSRTNRGLAKE
AKKKAEQAVSATGVLGQALAEAVRQHAALQSKVGGLAGASDAALRRVTRLLQEAEQILDK
ASGSQRKLEELERRFEEGEEALEAKATRLQALERRVSRLLEEIQEKANAYATC
NT seq
5562 nt
NT seq
+upstream
nt +downstream
nt
atgacagccagggggtccaggggccggcccgttatctgcaccgggctctccagggaggcc
ggaccatcggtgcccatggagctgctggttgctctcctgctgctggtccaggtgcccggt
gcggcgagccaggaagagccaggctgctccgcggggagctgccacccggccaccgggaac
ctgcttgtggggcgggcccagaacctgagcgccacgtccacctgtgggctgcaggggccc
caggagtactgcatcgtcagccacctgcaggactcggagaaatgcttctcctgtgactcc
cggtccccgtctctgcgcaccagccaccgcatccagaacgtggtgtacctcggcggccag
gacggccacgcgacctggtggcagtcggagaatggcgtggagcacgtaagcatccgcctg
gacctggaggccgagttccacttcacccacctcatcatgaaatttaagaccttccgccca
gcggccatgctgatcgagcgctcggcgaatttcggccgcacctggaaggtttatcgctac
ttcgcctacaactgctcccggctgttcccggccgtggctgtgcaggcgtcgggccgtgtg
gacgaggtgttgtgtgagcagcgctactccgagatcgagccctccagccacggcgaggtg
attttcaaggtcctggacccgtccatcccagtggaggatccgtacagcccagccatccag
gatctgctgcgcgtcaccaacctgcgggtgaacctgactaagctgcacacgctgggcgac
aacctgctggactcgcggcgccaggtgctgcgcaagtattactacgccctctacgagctg
gtgctgcgcgggagctgcttctgctacggccacgcctccgagtgcgcgcccgcccccggc
ctgccagcgggcgtggagggcatgattcacggccgttgcgtgtgcaaacaccacaccgcg
ggcctgaactgcgagcggtgccaggacttctaccaggagctgccctggcgccctgccggg
agcaccgacccacacgcctgccaagggtgtaactgtaaccagcactctcgccggtgccac
ttcgacatggccgtgtacctggccacgggcaacgccagcgggggcgtctgtgacgactgt
cagcacaacaccatgggccgcagctgccagctctgcaaacccttctactaccacagcccg
ctggccgacatccgggccagcaccgcctgcgtcccctgtgactgtgacccagtgggctcc
ctggacggcggggtgtgtgacagccacacggacgtggcgctgggcatgatcgccgggcag
tgccgctgcaaggaacacgtccagggcgtgcgctgcgacagctgcaaggaggccttctac
gggctgagccgcaccgacccgcagggctgccagccctgcaggtgcgaccctcggggcatc
ctcacgggcagccccccctgtgaccacgtcagtggagactgctactgcaagcgctttgtg
agcggccggtactgcagccagtgcctgcccgagttctggggcctgagcaccgacgtggcc
ggctgccggccctgcgcctgcgacttcgggggcgcctacagcaacaggtgctccatggag
gacgggttgtgcccctgccggccccacctcatcgggcgccagtgtgaccaggtgcagccc
ggctacttctgtgcacccctggactactacagctacgaggcagagcatgccacagggcac
gcgcccacccaccccacgctgccgggagcgctgcgccccgaggccccctcggactgcctg
gagcactcccgcgggctccccaacgggcggaaggggcgtctgcggcgccagcgtggcacc
atgcggctccggcagcaccgagccctgccccggcgcagccggcagccccagcacaagccc
gacgtggaagtggtgtcccgggagcacgtgggtcacatgatcacgtggacggggcccggc
ttcgcccgcgtgcgggatggggccggcctgtccttccacatcgacaacatcccctacgcc
atggagtacgacatcctgatccgctacgagcccgagtccacagaggactgggaggccatc
gtcagcgtcagtgcccaggcgttgcccacgagccctcgctgcgggaacgtgctgccctcg
gagcagagatacaaggaaagtctgccgcacaccgagaggtacgccctgctgtcccggccc
ttctgctttgagcccagtaaccagtacgagatcgccatgcggttccagcgggcaggtgtg
gtccagcgccacccagccgccttcatcctcatcgactcgctcgtccttctgccgcgagtg
ctggagctgccggctttccggggcagcgagccggcggcggtgcagcaccgggaggagctg
gagcgctacacgtgccaggaggcgttccgcatggcgaccatgccagcgctggccgagatg
tgcgcccgtctgctctgcagcatctccgccctgctgcacgatggggccctggcctgccag
tgcgacccccaaggctccaccagcagtgtgtgccagccggtgggcgggcagtgcccgtgc
aaaccccacgtgatcggccggcgctgtgaccagtgtgcgccaggcacgtatggactgggg
ccctccggctgcagccgctgtgcctgctcccccgagggctcggtctccaagctctgcgac
cccgtgagcgggcagtgccgatgccagcctggtgccgtggggcgccggtgcgaccagtgc
tcctggggccagtggggctttccggcctgccggccctgccactgcaatgggcactcggcg
gagtgcgacccccacaccggggcctgccaggggtgccgcgacgccaccacagggccccac
tgtgagaggtgcttggagggttactatggcgacccggtgctgggctcggggcagcagtgc
cggccctgcccatgcccggggtaccctgggactcagcattaccatggcaactcctgccac
gccgacaaggagaccaatcagatcgtctgtctgtgtgctccaggctatacgggcccgcgc
tgcgaccgctgctcccccggctacttcggggccccagggccagggggcgggggctgccgg
ccctgccagtgcaacaacaacatcgaccccagcgaccccggggcctgcgacccccgcagc
gggcagtgcctgcgctgcctgcaccacacggacgggccccgctgcgccgcctgccggccc
ggctaccacggccacgcgccgcagcgcacctgccgacgctgcacctgtaaccagctgggc
acgctgcctgcccactgcgcctccggcacctgctactgcgaccagctcacgggcagctgc
ccctgccgcgtccacgtggtgggcaagaactgcgaccagtgcgcccccggcttctggagc
ttcggtggggagcagggctgcgagccctgcagctgccacccggcccactccctgcagcaa
ggctgcaacatgttcacagggcagtgcccgtgccggccaggcttcgggggccgcacctgc
gccgactgccaggaggagcactggggcgagccagagcgggagtgcatggcctgtgactgc
cacccggccggggtggagagcctgcagtgcgagcgtctcagcgggcgctgtgcctgccgc
accggcttcacggggcagcgctgcgaccactgccagcgcggcttccaggacaacttcccc
cgctgcgaccgctgcccgccctgcttcgcccagtgggacctggccctggaccggctgcac
gaccggctgcgccagctgcaggggcaggcgcgagcgctgcaggagggaggccccgggccc
gagttcagcaacagccgcctgcaggacctggagagcaagctgaggagcacggagcggctg
gttggggacgggagcagccagggcgcccccctcctgcgccagctgggccgccggctggac
ggcaccaggaaggacatggacgaggtgtggaagcagctgcaggccgtggaggggcgcctg
gatgagccggctggagcggacgcggagcagaggggccgcctggccagcctgagcagggag
ctgcgggagctgaacctcaccctctcccaccagcaggagcagctggcaagatgggagggg
gccagctttggggagtcctaccggagcatccgggcctcctccgagcgctcgaggcaggcg
gcgcagcgggccagtgcctcggtgcaggggccggccagcctggtgggccaggcccagcgc
acacggcaggccgcggaggggctgctgcgcgacacaggtgacaccttccgccggagcctg
gcagcgcagaggaggtcgctgcgagaggcccagaagcgggcggctgtgctcagcgtctcc
aggctcaacgagaggatctgtggggcgcagggagatcagggctgcgaacaagccccctgt
ggaggggcctcctgccaggatgactccgggcagcggcgctgtgggggcccaggctgcagg
ggggcactccccatctccatgcaggccctgcgcaccgcccaggatgtctctcgccagttg
gaaagcacggttgggcagctgggtaccatcacccttaaggtgcaggagatccaggagctg
gcccggggcgccaggagacgagcccaggacacactggatgggtcccagacagccagaggc
cacatggaggagtccacagccaggctgcgagaattcatccagaagatcaaggacttcctg
gcagaggagggagccgacccggagagcatcgagctggtggcccagcaggtgctgaacatc
tccctgcccagcagccccagcaggatccggcacctgctgcaggagatccaggacagcatc
cggcagctggatggggtggacgctgtcctgaacagcacggcccacagcctggccaccacc
caggagctgctcacacgggcagggcaggccagggagcaagcggtgggcgtgaggggggtg
atcacggccacgcaggaggtgctggcgggggcgaaggtccaggtgtccgtggcagggcgt
gcgctgaagagcaccaagaaggcagtccggggcgtggagaacagagtgaaggaggccgag
cgcaggctccaggggctgcaggagaaggagtcgcgggcgctgagtgccctgcaggagctg
gcgacgcacgtggctgccctgcagaacaagtccaggaccaaccgggggctggccaaggaa
gccaagaagaaagctgagcaagccgtgtcggccacgggggtgctgggccaggcgctggcg
gaggcggtgcggcagcacgcggcgctgcagagcaaggtgggcgggctggccggggcgtcg
gacgccgcgctgcgccgggtgacgcggctcctgcaggaggctgagcagatcctggacaag
gccagcggcagccagaggaagctggaagagctggagcggcgctttgaggagggcgaggag
gcgctggaggccaaggccacgcggctgcaggcgctggagagacgggtgtccaggctgctg
gaggagatccaggagaaggccaatgcctacgccacctgctag
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