Chelonia mydas (green sea turtle): 102941801
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Entry
102941801 CDS
T02989
Symbol
HNRNPA1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1 isoform X2
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102941801 (HNRNPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102941801 (HNRNPA1)
03041 Spliceosome [BR:
cmy03041
]
102941801 (HNRNPA1)
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102941801 (HNRNPA1)
mRNA cycle factors
Common to processing body (P body) and stress granule
102941801 (HNRNPA1)
Spliceosome [BR:
cmy03041
]
Common components
Common spliceosomal components
hnRNP proteins
102941801 (HNRNPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
102941801
NCBI-ProteinID:
XP_007065868
LinkDB
All DBs
Position
20:10678105..10688436
Genome browser
AA seq
382 aa
AA seq
DB search
MSKSESPKEPEQLRKLFIGGLSFETTDESLRGHFEQWGTLTDCVVMRDPNTKRSRGFGFV
TYSTVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHH
LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQEMASASSSQRGRSGSGNFSGGGRGGGFGGNDNFNRGSNFSGRGGFGGSRGGGYGGS
GDGYNGFSNEGYGGGGGGPSYSGGSRGYGGSGNYDGYNNGGGGGFGSGSGGSSFGGGGNY
NDFGSYNNQSSNFGPMKGGNFGGRSSGPYSSGGGVALGGLLSDRGHQNKSLKTTAITPSP
IALSGGYGGSSSGGSYGGGRRF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagtccgagtcccctaaggaacccgagcagctgcgcaagctcttcatcggtggc
ctgagcttcgagacaacagatgagagcctccgtggccacttcgagcagtggggcacgctc
actgattgtgtggtaatgagagatccaaataccaagcgctccaggggctttgggtttgtt
acatactctacagtagaagaggttgatgctgccatgaatgctagaccacacaaagttgac
ggcagagttgttgaaccaaagagggctgtatccagagaggactctcagaggcctggagct
caccttacagtgaagaaaatcttcgttggtgggattaaggaagacacagaggagcaccac
ctgagagactactttgaacagtatggcaaaatcgaagtgattgagatcatgacagaccgt
ggcagtggcaagaagagaggttttgcgtttgtcacctttgatgaccacgactctgtggac
aagattgttattcagaagtatcacactgtgaatggccacaactgcgaagtgaggaaagca
ctttcaaagcaagaaatggccagcgcttcatccagccaaagaggtcgcagtggctctggg
aacttcagtggtggcggccgtggaggtggatttggtggaaatgacaactttaaccgtggc
agcaactttagtggtcgtggtgggtttggtggcagccgcggtggtggctatggaggcagt
ggagacggctataatggatttagcaatgagggttatggtggtggcggcggtgggcctagc
tactctggaggaagcagaggctatggtggcagtggcaactatgacggctataacaacgga
ggtggtggcggctttggcagcggcagtggaggaagcagttttggaggtggtggaaactac
aatgactttggcagttacaacaaccaatcttcaaactttggccctatgaaaggagggaac
ttcggaggcaggagctctggtccgtacagcagtggtgggggggtcgcactcggaggcttg
ctatctgacaggggtcaccagaacaaaagtttgaaaaccactgctataacgccgtctcca
attgctctctcaggtggctatggtggctccagtagtggcggtagttatggcggtgggaga
cggttttaa
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