Chelonia mydas (green sea turtle): 102941885
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Entry
102941885 CDS
T02989
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X2
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmy04121
]
102941885 (PDZRN3)
Enzymes [BR:
cmy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102941885 (PDZRN3)
Ubiquitin system [BR:
cmy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
102941885 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
GMC_oxred_C
Motif
Other DBs
NCBI-GeneID:
102941885
NCBI-ProteinID:
XP_007067237
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All DBs
Position
7:complement(11260824..11459063)
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AA seq
779 aa
AA seq
DB search
MGCSLCTLQKQEEQYKLLYEVCQVNGKDLSKATHDQAVEAFKTATEPIVVQVLRRTPRAK
IFSPSHESHLVDMGTQTDITFEHIMALTRMGSPPPPVSVLDPYLLPEDHSSVHEYYDPND
YMGSIHQEMDRDELELEEVDLHRVNSQDKLGLTVCYRTDDEDDIGIYVSEIDPNSIAAKD
GRLREGDRIIQINGIEVQNREEAVALLTSEESKNVSLLVARPEIQLDEGWMDDDRNDFLD
DLHMDMLEEQHHQAMQFTASMLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRND
ESSEQENNADDHTTSSNTLGSQKKLVYSHDTLGSGDMQFSNESFISADCTDTDFLSIPVD
ECERFRELLELKCQVKSANPYSLYYHNSALDISKSDHESVDRELEMLNEELRNIELECLN
IVRAHKMQQLKDQYREPWMLHNSGFRNYNTSIDARRHELSDITELPEKSDKDSSSAYNTG
ESCRSTPLTLQISPDNSLYRTAEGSSCQGNEGAVAYNVSQKNLLPSSESHESGSANYLSS
PKDPDLGKQLESKERKASDESKSPAQKLAGSYISPYHHSPYKHAHIPAHAQHYQSYMQLI
QQKSAVEYAQSQMSLVSMCKDFNSSSQSEPRMEWKVKVRSDGTRYITKRPVRDRLLRERA
IKIKEERSGMTTDDDAISEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCLKEQQ
GAEEKKEMNIIELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgggatgcagtttgtgcactctacagaagcaagaagagcagtacaaattactgtatgaa
gtttgtcaggtaaatggaaaagatttatcgaaagcaacacatgaccaggcagtggaagca
ttcaaaacagccacagagcccatcgttgtacaggtcctgaggagaaccccacgcgctaag
atcttcagtccttctcatgagtctcatctggtagatatgggcacccagaccgatataacc
tttgaacacatcatggctctaaccaggatgggatctcctcctccaccagtctcagtacta
gatccatatctcttacctgaggatcattcatcggtgcatgaatactatgacccaaatgac
tacatgggaagcattcatcaagaaatggacagagacgagttagaattagaggaagtagac
ttgcatagagtgaacagccaggacaagcttggccttactgtgtgttatcgaactgatgat
gaggatgacattggtatttatgttagtgagattgatcccaacagcattgctgcaaaagat
ggtcgcctgcgggagggagatcgcattattcaaattaatggcattgaggtacagaaccga
gaagaagctgtggcacttctaaccagtgaagagagcaagaatgtctccttacttgtagca
agaccagaaatccagctggatgaaggatggatggatgatgacagaaatgattttctggat
gacttacacatggacatgctagaggaacagcaccaccaggcaatgcagtttactgccagc
atgcttcagcagaagaagcacgaagaagatggaggcaccacagacactgccactatctta
tctaaccagcacgagaaggacagcggtgtgggccgcacagatgagagcacgcgaaatgat
gaaagctcagagcaggagaataatgccgatgatcacaccacttcctctaacactttagga
agccagaagaagctggtctacagtcatgacactctaggaagtggtgacatgcagttcagc
aatgaatcatttatctcagccgactgcacagacacagacttcctcagcatcccagtggat
gaatgtgagagattccgcgaactgctggagctgaagtgccaagtcaagtctgccaaccca
tacagtctgtattatcataacagtgccctggatataagtaagagtgaccacgaaagcgtt
gacagggagctggagatgctgaacgaggaactgcggaatattgagctagagtgtctgaat
atcgtgagagctcataaaatgcaacagctgaaggatcaataccgggagccctggatgctc
cataacagcggattccgtaactacaacacaagcatcgatgcgcgcaggcacgagctctca
gacattacagagctccctgagaaatctgacaaggatagctcgagtgcgtataatacaggc
gagagctgtcgaagcacaccgctcacgctgcagatttcccctgacaattcactgtacaga
actgcagaaggcagcagttgtcaaggtaatgagggggcagtggcatacaacgtctcccag
aagaatttgctacctagctcagaaagtcacgaatccggctctgctaactatctctcgtca
cctaaagatccggaccttggtaagcagctggaaagcaaagagagaaaagccagtgatgaa
agcaaaagcccagctcaaaaactggctggctcctacatctctccatatcatcactctccc
tataaacacgctcatatcccagcccacgctcagcactatcagagctacatgcagctaata
caacagaaatcagctgtggaatatgcacagagccaaatgagcctagtgagcatgtgcaaa
gactttaattcttcaagccagagtgaacccaggatggaatggaaagtcaaggtcaggagt
gatggaacccgctacatcacaaagaggccagtcagggacaggctgctgagagaacgtgcc
ataaagattaaggaagagcgcagtggtatgacgacagatgacgacgctataagcgagatg
aagatgggccgctactggagcaaggaggaacggaagcagcatttggtgaaagcgaaggag
cagaggaggcggcgtgagtttatgatgcagagcaggttagattgtttaaaggaacagcaa
ggtgcagaagaaaagaaagagatgaacatcattgaactgagccacaaaaaaatgatgaag
aagaggaataaaaaaatctttgataattggatgacaatccaagaactcttaacccatggc
acaaagtcccccgatggcacaagagtgtacaattccttcctgtcagtgactactgtataa
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integrated database retrieval system
