Chelonia mydas (green sea turtle): 102942025
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Entry
102942025 CDS
T02989
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04137
Mitophagy - animal
cmy04140
Autophagy - animal
cmy04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102942025 (HIF1A)
04137 Mitophagy - animal
102942025 (HIF1A)
04148 Efferocytosis
102942025 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmy03000
]
102942025 (HIF1A)
Transcription factors [BR:
cmy03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
102942025 (HIF1A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DUF2121
Motif
Other DBs
NCBI-GeneID:
102942025
NCBI-ProteinID:
XP_037757062
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All DBs
Position
6:complement(119449764..119492823)
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AA seq
805 aa
AA seq
DB search
MEITGEKKRISSDRRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIMRLT
ISYLRMRKLLDASDLETEAKMEKEMNCFYLKALDGFVMVLSEDGDMIYMSENVNKCMGLT
QFELTGHTVFDFTHPCDHEELREMLTHRNGPMKKGKEQNTERSFFLRMKCTLTSRGRTVN
IKSATWKVLHCTGHVRVYDTCNNQTLCGYKKPPMTCLVLICVPIPHPSNIEVPLDSKTFL
SRHSLDMKFSYCDERITELMGYEPEELLGHSIYEYYHALDSDHLTKTHHDMFTKGQVTTG
QYRMLAKHGGYVWVETQATVIYSTKNSQPQCIVCVNYVLSEIVQKELFLSLAQTECMLKP
VESPDMKIFSKADLEDTNSLFEKLKKEPDALTLLAPAPGDTIISLDFSSNESDEQQYDEV
PLYNDVMLPSSSEKLQNINLAMSPLPASETTKPLRSNADPALNREVVSKLEPNTEPLELA
FSSHQRQDQPASPSDASTNQSSPEPRSPNEYCFDVDNDMANEFKLELVEKLFAIDTEAKN
PFSTQETDLDLEMLAPYIPMDDDFQLRSFDQPPSLESGCASAQNVAANIIFQQTHTASTA
AEEITPVKTECMDDIKTLLVSQSPVLIINETKSAPASPYGGNRSRTASPIRAGKGTLDQT
EKSYPGTPNLLTVTLSKRSAMNEELNPKMLALHNSQRKRKMEYDGSLFQAVGIGSLFQQS
EDCGANASLCWKRVKGCKSNGQNGVGQKTIILLSTDIASKLLGQSMDETGLPQLTSYDCE
VNAPIQGSRNLLQGEELLRALDQVN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggagatcaccggcgagaaaaaaaggattagttcagatcgcagaaaggagaagtcgaga
gatgcagccagatgccgaagaagtaaggaatctgaagttttctatgaacttgctcaccag
ctgcctcttcctcatactgtcagcgcacaccttgacaaggcctccattatgaggctgact
atcagctacttacgcatgagaaagctgttagatgcaagtgacctggagacagaagccaaa
atggagaaggagatgaattgcttttacttaaaagcccttgatggatttgtcatggttctt
tccgaggatggtgacatgatttacatgtctgaaaatgtgaacaagtgtatggggctcact
cagttcgagctgactgggcacactgtgttcgattttacccacccatgtgaccatgaagag
ctgagagaaatgcttacacatagaaatggtcctatgaaaaagggcaaagaacagaataca
gagcgtagctttttcctcagaatgaagtgcacactgaccagcaggggaaggaccgtgaat
ataaagtctgcaacatggaaggtacttcactgtacagggcatgttcgtgtgtatgatacc
tgcaataatcagactctctgtggatataaaaagcctcccatgacatgtttggtgttgatc
tgtgtacctatccctcatccatcaaacattgaagtccctttggacagcaagacattcctc
agtcgccacagcctggatatgaaattttcatattgtgatgaaagaattacagagctgatg
ggatatgagccagaagaactcttgggtcactccatctatgaatactatcatgctctggac
tctgatcatctgaccaaaactcaccatgatatgttcactaaagggcaagtgactacagga
cagtacagaatgcttgctaaacacggtggatatgtctgggttgaaactcaagcaactgtt
atatacagcactaagaactcccaaccacagtgcatagtgtgtgtaaattacgtcttgagt
gagattgtacagaaggagttatttctttcccttgcacagactgagtgcatgctgaaacca
gtggagtctcctgatatgaaaatattcagcaaggctgacctagaagatactaacagcctc
tttgaaaaacttaaaaaggaaccagatgctttaactttgctcgcaccagctcctggagac
acgattatctctttagatttcagcagtaatgagtctgatgagcaacaatatgatgaagtt
cctttgtataatgatgtaatgctcccctcatccagtgagaaattgcagaatataaatttg
gcaatgtccccacttcctgcctctgaaacgacaaagccacttcgtagcaatgctgaccct
gcactcaatagagaagttgtatcaaagctggagccaaacacagagccactcgaacttgca
ttttccagccaccagaggcaagaccagccagccagcccttctgatgcaagcactaaccaa
agttcacctgagccccgtagtcccaatgagtattgctttgatgtggataatgatatggct
aatgagtttaagctggaattagtggaaaaactctttgcaatagacacagaagcgaaaaat
ccattctctactcaggaaactgatttagacttggagatgttagctccttacatcccaatg
gatgatgacttccagttacgatcctttgatcagccaccttcactggagagtggttgtgcc
agcgctcagaatgtggccgccaatatcatatttcagcaaactcatacggcatctactgct
gctgaggaaataacaccagtgaaaacagaatgcatggatgacattaagactctacttgtt
tctcagtctcctgtcctcataatcaatgaaaccaagagcgccccagcatcaccatatggt
ggaaatcgaagtcgaactgcatctccaatcagggctggaaaaggaacattggaccagacg
gagaaatcttatccaggaacacccaatttgctaacagtcactttgagcaaaagatctgca
atgaatgaagaactaaatccaaagatgctagctttgcataactctcagagaaagcgaaag
atggaatatgatggctcgctttttcaagcagtgggaattggatctttattccagcagtca
gaagattgtggagcgaatgcatcactttgttggaaacgtgtaaaagggtgcaaatctaat
ggccagaatggagtgggacaaaagacaatcatcttactatcaactgatatagcgagtaag
ctcctaggacagtcaatggatgagactggactaccacaacttaccagttatgattgtgaa
gtaaatgctcccatacaaggcagcagaaacctgctacagggtgaagaattgctcagagct
ctggatcaagttaactga
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