KEGG   Chelonia mydas (green sea turtle): 102942025
Entry
102942025         CDS       T02989                                 
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha
  KO
K08268  hypoxia-inducible factor 1 alpha
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy04137  Mitophagy - animal
cmy04140  Autophagy - animal
cmy04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    102942025 (HIF1A)
   04137 Mitophagy - animal
    102942025 (HIF1A)
   04148 Efferocytosis
    102942025 (HIF1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cmy03000]
    102942025 (HIF1A)
Transcription factors [BR:cmy03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    102942025 (HIF1A)
SSDB
Motif
Pfam: PAS_3 PAS_11 HIF-1a_CTAD PAS HIF-1 PAS_9 PAS_4 HLH DUF2121
Other DBs
NCBI-GeneID: 102942025
NCBI-ProteinID: XP_037757062
LinkDB
Position
6:complement(119449764..119492823)
AA seq 805 aa
MEITGEKKRISSDRRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIMRLT
ISYLRMRKLLDASDLETEAKMEKEMNCFYLKALDGFVMVLSEDGDMIYMSENVNKCMGLT
QFELTGHTVFDFTHPCDHEELREMLTHRNGPMKKGKEQNTERSFFLRMKCTLTSRGRTVN
IKSATWKVLHCTGHVRVYDTCNNQTLCGYKKPPMTCLVLICVPIPHPSNIEVPLDSKTFL
SRHSLDMKFSYCDERITELMGYEPEELLGHSIYEYYHALDSDHLTKTHHDMFTKGQVTTG
QYRMLAKHGGYVWVETQATVIYSTKNSQPQCIVCVNYVLSEIVQKELFLSLAQTECMLKP
VESPDMKIFSKADLEDTNSLFEKLKKEPDALTLLAPAPGDTIISLDFSSNESDEQQYDEV
PLYNDVMLPSSSEKLQNINLAMSPLPASETTKPLRSNADPALNREVVSKLEPNTEPLELA
FSSHQRQDQPASPSDASTNQSSPEPRSPNEYCFDVDNDMANEFKLELVEKLFAIDTEAKN
PFSTQETDLDLEMLAPYIPMDDDFQLRSFDQPPSLESGCASAQNVAANIIFQQTHTASTA
AEEITPVKTECMDDIKTLLVSQSPVLIINETKSAPASPYGGNRSRTASPIRAGKGTLDQT
EKSYPGTPNLLTVTLSKRSAMNEELNPKMLALHNSQRKRKMEYDGSLFQAVGIGSLFQQS
EDCGANASLCWKRVKGCKSNGQNGVGQKTIILLSTDIASKLLGQSMDETGLPQLTSYDCE
VNAPIQGSRNLLQGEELLRALDQVN
NT seq 2418 nt   +upstreamnt  +downstreamnt
atggagatcaccggcgagaaaaaaaggattagttcagatcgcagaaaggagaagtcgaga
gatgcagccagatgccgaagaagtaaggaatctgaagttttctatgaacttgctcaccag
ctgcctcttcctcatactgtcagcgcacaccttgacaaggcctccattatgaggctgact
atcagctacttacgcatgagaaagctgttagatgcaagtgacctggagacagaagccaaa
atggagaaggagatgaattgcttttacttaaaagcccttgatggatttgtcatggttctt
tccgaggatggtgacatgatttacatgtctgaaaatgtgaacaagtgtatggggctcact
cagttcgagctgactgggcacactgtgttcgattttacccacccatgtgaccatgaagag
ctgagagaaatgcttacacatagaaatggtcctatgaaaaagggcaaagaacagaataca
gagcgtagctttttcctcagaatgaagtgcacactgaccagcaggggaaggaccgtgaat
ataaagtctgcaacatggaaggtacttcactgtacagggcatgttcgtgtgtatgatacc
tgcaataatcagactctctgtggatataaaaagcctcccatgacatgtttggtgttgatc
tgtgtacctatccctcatccatcaaacattgaagtccctttggacagcaagacattcctc
agtcgccacagcctggatatgaaattttcatattgtgatgaaagaattacagagctgatg
ggatatgagccagaagaactcttgggtcactccatctatgaatactatcatgctctggac
tctgatcatctgaccaaaactcaccatgatatgttcactaaagggcaagtgactacagga
cagtacagaatgcttgctaaacacggtggatatgtctgggttgaaactcaagcaactgtt
atatacagcactaagaactcccaaccacagtgcatagtgtgtgtaaattacgtcttgagt
gagattgtacagaaggagttatttctttcccttgcacagactgagtgcatgctgaaacca
gtggagtctcctgatatgaaaatattcagcaaggctgacctagaagatactaacagcctc
tttgaaaaacttaaaaaggaaccagatgctttaactttgctcgcaccagctcctggagac
acgattatctctttagatttcagcagtaatgagtctgatgagcaacaatatgatgaagtt
cctttgtataatgatgtaatgctcccctcatccagtgagaaattgcagaatataaatttg
gcaatgtccccacttcctgcctctgaaacgacaaagccacttcgtagcaatgctgaccct
gcactcaatagagaagttgtatcaaagctggagccaaacacagagccactcgaacttgca
ttttccagccaccagaggcaagaccagccagccagcccttctgatgcaagcactaaccaa
agttcacctgagccccgtagtcccaatgagtattgctttgatgtggataatgatatggct
aatgagtttaagctggaattagtggaaaaactctttgcaatagacacagaagcgaaaaat
ccattctctactcaggaaactgatttagacttggagatgttagctccttacatcccaatg
gatgatgacttccagttacgatcctttgatcagccaccttcactggagagtggttgtgcc
agcgctcagaatgtggccgccaatatcatatttcagcaaactcatacggcatctactgct
gctgaggaaataacaccagtgaaaacagaatgcatggatgacattaagactctacttgtt
tctcagtctcctgtcctcataatcaatgaaaccaagagcgccccagcatcaccatatggt
ggaaatcgaagtcgaactgcatctccaatcagggctggaaaaggaacattggaccagacg
gagaaatcttatccaggaacacccaatttgctaacagtcactttgagcaaaagatctgca
atgaatgaagaactaaatccaaagatgctagctttgcataactctcagagaaagcgaaag
atggaatatgatggctcgctttttcaagcagtgggaattggatctttattccagcagtca
gaagattgtggagcgaatgcatcactttgttggaaacgtgtaaaagggtgcaaatctaat
ggccagaatggagtgggacaaaagacaatcatcttactatcaactgatatagcgagtaag
ctcctaggacagtcaatggatgagactggactaccacaacttaccagttatgattgtgaa
gtaaatgctcccatacaaggcagcagaaacctgctacagggtgaagaattgctcagagct
ctggatcaagttaactga

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