Chelonia mydas (green sea turtle): 102942178
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Entry
102942178 CDS
T02989
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmy03000
]
102942178 (RAI1)
Transcription factors [BR:
cmy03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
102942178 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
102942178
NCBI-ProteinID:
XP_007062807
LinkDB
All DBs
Position
10:complement(7517026..7653927)
Genome browser
AA seq
1909 aa
AA seq
DB search
MQSFRERCGFHGNQQNYQQTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYPG
YENSAAEKYHRGNKQLPGQQLQGRPAFSNYAVQENSPYPARYSGEESLQTWGAQQQSLAG
GVAKYEENLMKKSPAPAGSRQYHEQTAQLPFRTHSLHLPQQPQPPALTYPKLQRQKIQND
VSSPMSFSQTGHFTQHSQSQFPASSTYSSVPGGSQAAHSYKSCIAPSSQQHERPLGGAAN
LASGQRVQNLHGYQANRISYDQQQQQQQQPPLQGRHHAQETLHYQNLAKYQHYNQPGQTY
CQTDAPVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLMPNLENFQYSQQSLSTGS
FAAGITDHSHFMPLLNPSPTDGTSPDAQSGNCKNLQKEKIPENLLSDLSLQSLTALTSQV
ENISNTVQQLLLSKSAVPQKKGIKNPPRTPEQLKGQHCSPESSTYSAEQVGTPLSDPLST
PQSVHAEAQDADYLSGSEDQLERNFLYCSQSRSPARVNSNSKAKPESVSTCSVTSPDDMS
TKSDDSFQSIHANLPLETFTKYMTNERECPRLLLSALSQEELASEIIVLQDAINEKADKA
WANSPALNKDPAKSPFHVENHRTGLDSMVKSTWSNQGDSGTHPEPLKLNKASGGNNSKDF
SEEVYENAQVEFTTTETKNALKVTSSLAYNSKPSIPAATSSSEAASYSCYSNTTANSVGS
ENTMEHFDWPDESISESCLRWKELGPCLQSSDLSKGLFHSKLAGSCKEKKNVCCMDICDG
EQSAKNEQAEDFSQQQMGEEDTLTYDEATKADSERWLEDTRHCCSGGDFSEIPMISSPDL
KESDLEPEEYSSLCELASSEQKSVIYDTSPPKPPENAAVLSSKDVPVSAEETVSTVEKED
SAPSSRLSGQSVILLGPAVGTETKVKSWFESSLPHIKPEEDTTVGESVLQEKTETETTLS
VKVKKQILPENLLAKSESISRGKTLRSKRVHSRLSEGEESSKPVPSPFKDIQAAGMVANT
RVGPDGQMETTSKNAHGQTPRFPTEGLPARMCTRSFTALSEPRTPAPLEGLKVLAHQEKL
GKKPVCGMKQRVAFKARKRTGRPAPKVVQNPSEPTSLLVPNLVQNEDFIGQKAKGLEPQD
AEVKDQRSMILRSRTKTQEVYTKRRREKRTADVRLKNCKTPKKLLSNNHLPPTFKITPPG
GPHKEGKVGKRMKLSKSGPGTGSKLSERPLHSLKRKSTFVSPIPTKKRNLVLRSSSSSAK
EEKPEASPNLFKRMPSTKKARAKLPTKSSCEAALTPPPAKEPPNVCIKITSRAAFQGAMK
TKVLPPRKGRGLKLEAIVQKITSPNLKKFACKTAAATAHSNPLSPAGAEKERALKNASVT
PAVGEAGPLNQGMAQKAPAASVAEQLCRNSNNRPLKGKLMNSKKLSSDCFKGEAYSSPET
AQHNGSSMAAKSISLLPKKRNRKGKAAAFSVAKNPLDRRAHLAPALLLTARERAGAGDAL
GNGEDGQRDGKKPKTEDKDLAKNEPPEGRSSQTQTRVQKQRANHSSYNGYSKRQRKRHTR
SKAKNVAARCKSRAKRQQQAPLLNPAEPEIRLKYISCKRLRTDSRAPPFSPYVRVEKRNE
FTTTCTVINSAGEEARLHKEQQPSSSAQALLPGGASLQPKAALPLSSTMHLGPVVSKALN
AACLVCCLCRNPANYKDLGDLCGPYYPEHCLPKKKSRLKDKIKVEGPSEEAPVPSPAERT
LKTTDNNCTTSTISGKPPRLDSAADSAKQSALRSSSRGMFRKLQSCYCCDERTEGEEAAE
KPRRHECNKAESPSQEPVGDTQEHWVHEACAIWTAGVYLVAGKLYGLQEAIKVAAEVRCS
SCQQAGATIGCCHKGCAQTYHYACAIDTGCLLTEENFSLKCPKHKRQPL
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagaactaccagcagact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcgtcagaggctggtggcgaaggagtactacagtcagcagcagctgccttacccaggg
tacgagaacagcgccgcggagaaatatcacaggggaaataagcaattgcctggccagcag
ctgcaaggccggccggccttttcgaattacgcagtccaagagaacagcccgtacccggcc
cgctattctggggaggagagcctgcagacctggggagctcagcagcaatccttagccgga
ggagtggcgaagtatgaggaaaacttgatgaaaaagagcccggctcccgccggcagcagg
cagtaccacgagcaaacggctcagcttccgttccgaactcactccttgcacctgccgcag
cagccgcagccacctgccttgacatatcccaagctgcaaaggcagaagatccaaaatgac
gtctcctcacccatgtccttttcccagaccggccacttcacccagcactcccagtcccag
ttcccagcctcttcgacgtactcctccgtcccaggagggagccaggcagctcactcgtat
aaaagctgcatcgcgccctccagccaacagcacgagcggcctcttggaggtgctgcgaac
ctggcatctgggcagcgagtacagaacctgcatggctatcaggcaaaccgaattagctac
gaccagcagcagcaacaacaacaacagccgcccttgcaaggaaggcatcatgcccaggaa
acgcttcactatcaaaacctagcaaagtaccaacattataaccagccaggccagacctat
tgccagactgatgctcctgtgaggacgccagagcaatattaccagacatttagtcctagc
tcaagtcattctccagctcgttctgttggtaggtctccatcctatagctccactccatct
cctctgatgccaaacctggagaatttccaatacagccagcaatctctcagcacagggtct
ttcgctgccggcatcactgaccacagccatttcatgcctttattgaatccttctccaaca
gatgggacgagtccagatgctcagtccgggaactgcaaaaacttgcagaaggagaagatc
cctgaaaacctcctgtccgatctcagtttgcaaagtctaactgcgctcacctcgcaagtc
gagaatatttccaacactgtccagcagcttctcctttcaaaatcagcagtgccccagaaa
aaaggcatcaaaaaccctcctaggaccccagaacagctcaaaggccaacactgtagtcca
gagagcagcacgtactctgccgagcaggtaggcacccccctatcggacccccttagcacc
cctcagtcagtacatgctgaagctcaggatgccgattatctgagcgggtctgaagatcaa
ctagagagaaatttcctttattgcagtcaaagccgcagtccagcaagggtcaacagcaac
tccaaggccaagcccgagtcggtctctacctgctcggtgacttctccagacgacatgtcc
acgaagtccgatgattctttccagagtattcatgctaacctgcccttggaaacattcacc
aagtacatgaccaatgaaagggagtgcccaaggctgctcctgagtgcgctgtctcaggag
gagctggcttccgaaatcattgtgctacaggacgctatcaacgagaaggcagacaaagcc
tgggccaactcccccgctttaaacaaagaccctgcaaaatcccccttccatgtagaaaat
cacagaacaggtctggactcaatggttaagagcacatggtccaaccaaggtgactcgggt
acccaccccgaacccctgaaattaaacaaagcctctgggggaaacaacagtaaggatttc
agcgaagaggtttatgagaatgcccaagtggagtttacaacaactgaaacaaagaatgct
cttaaagtcaccagttccctggcgtataattccaaacccagtatcccagctgctacttcc
agttctgaggccgccagttacagctgctattcaaacaccacggccaactcagtgggttcc
gaaaacaccatggagcattttgactggccagatgaaagcatcagtgaatcatgcctgagg
tggaaggagcttgggccatgtctacaatcatcagatctttccaagggtttgttccacagc
aaattggctgggtcttgcaaagagaaaaaaaatgtctgctgcatggatatatgtgacggt
gaacaatcagccaagaatgaacaagccgaggacttcagccagcagcagatgggggaggaa
gacactttgacgtatgatgaggccaccaaagcagatagtgagaggtggctggaggatacc
aggcactgctgttcaggtggggacttcagcgaaatcccgatgatatcatctccagatctg
aaggagtctgatttggaaccagaagaatattcatctctgtgtgagctggctagttcagag
cagaagtctgtgatctacgatacatccccacctaaacctcctgagaatgctgcggtgctc
tcctccaaggatgtgccggtatcagcagaagaaactgtaagcacagtggagaaagaagat
tcagctccctcctctcgtttgtctggacagtctgttatcctcttgggcccagcagttggc
actgaaaccaaggtgaaaagttggtttgaatcttctctgcctcacataaaacctgaggag
gacacaacggtaggtgaaagcgtcctccaggagaagacagagactgaaacgaccttgtct
gttaaggtaaagaagcaaatactaccagaaaatttgctggcaaaatcagagtcgatctcg
aggggcaagactcttcgcagcaagagggtccattccaggttgtcagaaggagaggaatcc
agcaaaccagtaccaagcccgttcaaagacatccaggcagctggcatggtggccaacaca
cgtgtagggccagatggccagatggaaacaacaagcaaaaatgcccatggccagactcct
aggtttccaactgaaggcttgccagctcggatgtgtacccgctctttcactgccttgagt
gagcccaggacgccagccccactggaaggactgaaggtgttggcccatcaagaaaagtta
gggaagaaaccagtttgtggcatgaagcagagagtggctttcaaagccaggaaacgcacc
ggaagaccggccccaaaagttgttcaaaatcccagtgaacccacttctctcctggtccca
aacttggtgcagaacgaggactttattggccaaaaggctaaaggcctagagccccaagac
gcagaggtgaaggaccagagatccatgatcctgcggtctaggaccaagacacaggaggtc
tacacgaaaaggagaagggagaagaggactgcagatgtcaggctcaaaaactgtaaaaca
cccaagaagctcctttcaaacaaccatctaccccccaccttcaagatcacacccccaggg
gggccacacaaagaagggaaggtgggcaaaagaatgaaactctccaaatccgggcctgga
acgggcagcaaactgtctgagcggccgctgcattcgctgaagagaaaatcaaccttcgtg
tcccctatccctaccaaaaagagaaatttagttttaaggagcagcagcagcagcgcaaaa
gaggagaagcccgaagcctcccccaatctctttaaaaggatgccgtcaaccaaaaaggcg
agagctaaactgcccacaaagagctcctgcgaagcagccttgacgccccctccagctaaa
gaaccccccaacgtctgtattaaaatcacctctcgggccgcatttcagggggccatgaag
acaaaagtgctgcccccgaggaaaggcaggggcctgaagctggaggccattgtgcagaag
atcacctcgccgaatttaaagaagtttgcatgcaaaacggccgccgctactgcacacagt
aatcctctgagccctgccggcgcggagaaggagcgggccttaaagaatgcaagtgtaacc
ccagcggtgggagaagcggggccattaaaccagggcatggcacaaaaggctcctgccgct
tcagtagcagagcaattatgcagaaattcgaacaacagacccttaaaaggaaaactaatg
aacagtaagaaactgtcctctgactgtttcaagggtgaggcctattcatctcccgagaca
gcgcagcacaacggcagcagcatggctgcgaagagcatcagcctgctgcccaagaagagg
aaccgaaaagggaaagcagcagccttcagcgtggccaaaaaccccttggataggcgggcg
catctcgcccctgctctgctcctgacggccagagagcgggcaggcgcgggggacgcgctg
gggaacggggaagacggacaacgggacgggaagaagccgaagaccgaggacaaagacttg
gccaagaatgaaccccctgaggggagaagctcccagacccaaacccgggtgcagaagcag
cgagcgaaccactccagctacaatggctactccaagagacaaaggaaacggcacacccgc
agcaaggccaagaacgtggccgccaggtgtaaaagcagggcgaagcggcagcagcaggcc
ccgctgcttaaccccgcggagcccgaaatcaggctcaagtacatctcgtgcaagcggctg
cggacggacagccgagcgccgcccttctccccctacgtgcgggtggagaagcgcaacgag
ttcaccaccacctgcaccgtcatcaactcagccggggaggaggccaggctccacaaggag
cagcagccttcgtcctcggcccaggccctgcttcccggcggggcctccctgcagcccaaa
gcggcgctgcctttatcttccacaatgcacctgggcccagtggtgtccaaggccctcaac
gcagcctgtctggtctgctgcctctgccggaacccagccaattacaaagacctgggggat
ctctgtgggccgtattacccggagcactgcctgccgaaaaagaaatcgaggctgaaagac
aagattaaagtggaggggccgagcgaagaggctcccgtgccttcgccggcagagagaacg
ctcaaaacgacagataataattgtacaacgagtacaatcagtgggaagccgccaaggctg
gacagtgctgctgactcagcgaaacagagcgctctccggtcgagttccagggggatgttt
aggaaactacaaagctgttactgctgtgatgagaggacagagggagaggaggcggcagag
aagcccagacggcatgagtgcaacaaagccgagtccccgtctcaggagccggtgggagac
acgcaggagcactgggttcacgaagcctgtgctatatggaccgctggggtttacctggtt
gcagggaagctgtatgggctacaggaggcgataaaggtggctgctgaagtgagatgctct
agttgccaacaagcaggagcaaccattgggtgctgccacaagggatgtgcccaaacctat
cattacgcatgtgccatcgacacaggttgcttattaactgaagagaacttctctctgaaa
tgtcccaaacataagaggcagccgttataa
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integrated database retrieval system