KEGG   Chelonia mydas (green sea turtle): 102942178
Entry
102942178         CDS       T02989                                 
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
  KO
K19749  retinoic acid-induced protein 1
Organism
cmy  Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cmy03000]
    102942178 (RAI1)
Transcription factors [BR:cmy03000]
 Eukaryotic type
  Zinc finger
   Other zinc fingers
    102942178 (RAI1)
SSDB
Motif
Pfam: zf-HC5HC2H zf-HC5HC2H_2
Other DBs
NCBI-GeneID: 102942178
NCBI-ProteinID: XP_007062807
LinkDB
Position
10:complement(7517026..7653927)
AA seq 1909 aa
MQSFRERCGFHGNQQNYQQTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYPG
YENSAAEKYHRGNKQLPGQQLQGRPAFSNYAVQENSPYPARYSGEESLQTWGAQQQSLAG
GVAKYEENLMKKSPAPAGSRQYHEQTAQLPFRTHSLHLPQQPQPPALTYPKLQRQKIQND
VSSPMSFSQTGHFTQHSQSQFPASSTYSSVPGGSQAAHSYKSCIAPSSQQHERPLGGAAN
LASGQRVQNLHGYQANRISYDQQQQQQQQPPLQGRHHAQETLHYQNLAKYQHYNQPGQTY
CQTDAPVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLMPNLENFQYSQQSLSTGS
FAAGITDHSHFMPLLNPSPTDGTSPDAQSGNCKNLQKEKIPENLLSDLSLQSLTALTSQV
ENISNTVQQLLLSKSAVPQKKGIKNPPRTPEQLKGQHCSPESSTYSAEQVGTPLSDPLST
PQSVHAEAQDADYLSGSEDQLERNFLYCSQSRSPARVNSNSKAKPESVSTCSVTSPDDMS
TKSDDSFQSIHANLPLETFTKYMTNERECPRLLLSALSQEELASEIIVLQDAINEKADKA
WANSPALNKDPAKSPFHVENHRTGLDSMVKSTWSNQGDSGTHPEPLKLNKASGGNNSKDF
SEEVYENAQVEFTTTETKNALKVTSSLAYNSKPSIPAATSSSEAASYSCYSNTTANSVGS
ENTMEHFDWPDESISESCLRWKELGPCLQSSDLSKGLFHSKLAGSCKEKKNVCCMDICDG
EQSAKNEQAEDFSQQQMGEEDTLTYDEATKADSERWLEDTRHCCSGGDFSEIPMISSPDL
KESDLEPEEYSSLCELASSEQKSVIYDTSPPKPPENAAVLSSKDVPVSAEETVSTVEKED
SAPSSRLSGQSVILLGPAVGTETKVKSWFESSLPHIKPEEDTTVGESVLQEKTETETTLS
VKVKKQILPENLLAKSESISRGKTLRSKRVHSRLSEGEESSKPVPSPFKDIQAAGMVANT
RVGPDGQMETTSKNAHGQTPRFPTEGLPARMCTRSFTALSEPRTPAPLEGLKVLAHQEKL
GKKPVCGMKQRVAFKARKRTGRPAPKVVQNPSEPTSLLVPNLVQNEDFIGQKAKGLEPQD
AEVKDQRSMILRSRTKTQEVYTKRRREKRTADVRLKNCKTPKKLLSNNHLPPTFKITPPG
GPHKEGKVGKRMKLSKSGPGTGSKLSERPLHSLKRKSTFVSPIPTKKRNLVLRSSSSSAK
EEKPEASPNLFKRMPSTKKARAKLPTKSSCEAALTPPPAKEPPNVCIKITSRAAFQGAMK
TKVLPPRKGRGLKLEAIVQKITSPNLKKFACKTAAATAHSNPLSPAGAEKERALKNASVT
PAVGEAGPLNQGMAQKAPAASVAEQLCRNSNNRPLKGKLMNSKKLSSDCFKGEAYSSPET
AQHNGSSMAAKSISLLPKKRNRKGKAAAFSVAKNPLDRRAHLAPALLLTARERAGAGDAL
GNGEDGQRDGKKPKTEDKDLAKNEPPEGRSSQTQTRVQKQRANHSSYNGYSKRQRKRHTR
SKAKNVAARCKSRAKRQQQAPLLNPAEPEIRLKYISCKRLRTDSRAPPFSPYVRVEKRNE
FTTTCTVINSAGEEARLHKEQQPSSSAQALLPGGASLQPKAALPLSSTMHLGPVVSKALN
AACLVCCLCRNPANYKDLGDLCGPYYPEHCLPKKKSRLKDKIKVEGPSEEAPVPSPAERT
LKTTDNNCTTSTISGKPPRLDSAADSAKQSALRSSSRGMFRKLQSCYCCDERTEGEEAAE
KPRRHECNKAESPSQEPVGDTQEHWVHEACAIWTAGVYLVAGKLYGLQEAIKVAAEVRCS
SCQQAGATIGCCHKGCAQTYHYACAIDTGCLLTEENFSLKCPKHKRQPL
NT seq 5730 nt   +upstreamnt  +downstreamnt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagaactaccagcagact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcgtcagaggctggtggcgaaggagtactacagtcagcagcagctgccttacccaggg
tacgagaacagcgccgcggagaaatatcacaggggaaataagcaattgcctggccagcag
ctgcaaggccggccggccttttcgaattacgcagtccaagagaacagcccgtacccggcc
cgctattctggggaggagagcctgcagacctggggagctcagcagcaatccttagccgga
ggagtggcgaagtatgaggaaaacttgatgaaaaagagcccggctcccgccggcagcagg
cagtaccacgagcaaacggctcagcttccgttccgaactcactccttgcacctgccgcag
cagccgcagccacctgccttgacatatcccaagctgcaaaggcagaagatccaaaatgac
gtctcctcacccatgtccttttcccagaccggccacttcacccagcactcccagtcccag
ttcccagcctcttcgacgtactcctccgtcccaggagggagccaggcagctcactcgtat
aaaagctgcatcgcgccctccagccaacagcacgagcggcctcttggaggtgctgcgaac
ctggcatctgggcagcgagtacagaacctgcatggctatcaggcaaaccgaattagctac
gaccagcagcagcaacaacaacaacagccgcccttgcaaggaaggcatcatgcccaggaa
acgcttcactatcaaaacctagcaaagtaccaacattataaccagccaggccagacctat
tgccagactgatgctcctgtgaggacgccagagcaatattaccagacatttagtcctagc
tcaagtcattctccagctcgttctgttggtaggtctccatcctatagctccactccatct
cctctgatgccaaacctggagaatttccaatacagccagcaatctctcagcacagggtct
ttcgctgccggcatcactgaccacagccatttcatgcctttattgaatccttctccaaca
gatgggacgagtccagatgctcagtccgggaactgcaaaaacttgcagaaggagaagatc
cctgaaaacctcctgtccgatctcagtttgcaaagtctaactgcgctcacctcgcaagtc
gagaatatttccaacactgtccagcagcttctcctttcaaaatcagcagtgccccagaaa
aaaggcatcaaaaaccctcctaggaccccagaacagctcaaaggccaacactgtagtcca
gagagcagcacgtactctgccgagcaggtaggcacccccctatcggacccccttagcacc
cctcagtcagtacatgctgaagctcaggatgccgattatctgagcgggtctgaagatcaa
ctagagagaaatttcctttattgcagtcaaagccgcagtccagcaagggtcaacagcaac
tccaaggccaagcccgagtcggtctctacctgctcggtgacttctccagacgacatgtcc
acgaagtccgatgattctttccagagtattcatgctaacctgcccttggaaacattcacc
aagtacatgaccaatgaaagggagtgcccaaggctgctcctgagtgcgctgtctcaggag
gagctggcttccgaaatcattgtgctacaggacgctatcaacgagaaggcagacaaagcc
tgggccaactcccccgctttaaacaaagaccctgcaaaatcccccttccatgtagaaaat
cacagaacaggtctggactcaatggttaagagcacatggtccaaccaaggtgactcgggt
acccaccccgaacccctgaaattaaacaaagcctctgggggaaacaacagtaaggatttc
agcgaagaggtttatgagaatgcccaagtggagtttacaacaactgaaacaaagaatgct
cttaaagtcaccagttccctggcgtataattccaaacccagtatcccagctgctacttcc
agttctgaggccgccagttacagctgctattcaaacaccacggccaactcagtgggttcc
gaaaacaccatggagcattttgactggccagatgaaagcatcagtgaatcatgcctgagg
tggaaggagcttgggccatgtctacaatcatcagatctttccaagggtttgttccacagc
aaattggctgggtcttgcaaagagaaaaaaaatgtctgctgcatggatatatgtgacggt
gaacaatcagccaagaatgaacaagccgaggacttcagccagcagcagatgggggaggaa
gacactttgacgtatgatgaggccaccaaagcagatagtgagaggtggctggaggatacc
aggcactgctgttcaggtggggacttcagcgaaatcccgatgatatcatctccagatctg
aaggagtctgatttggaaccagaagaatattcatctctgtgtgagctggctagttcagag
cagaagtctgtgatctacgatacatccccacctaaacctcctgagaatgctgcggtgctc
tcctccaaggatgtgccggtatcagcagaagaaactgtaagcacagtggagaaagaagat
tcagctccctcctctcgtttgtctggacagtctgttatcctcttgggcccagcagttggc
actgaaaccaaggtgaaaagttggtttgaatcttctctgcctcacataaaacctgaggag
gacacaacggtaggtgaaagcgtcctccaggagaagacagagactgaaacgaccttgtct
gttaaggtaaagaagcaaatactaccagaaaatttgctggcaaaatcagagtcgatctcg
aggggcaagactcttcgcagcaagagggtccattccaggttgtcagaaggagaggaatcc
agcaaaccagtaccaagcccgttcaaagacatccaggcagctggcatggtggccaacaca
cgtgtagggccagatggccagatggaaacaacaagcaaaaatgcccatggccagactcct
aggtttccaactgaaggcttgccagctcggatgtgtacccgctctttcactgccttgagt
gagcccaggacgccagccccactggaaggactgaaggtgttggcccatcaagaaaagtta
gggaagaaaccagtttgtggcatgaagcagagagtggctttcaaagccaggaaacgcacc
ggaagaccggccccaaaagttgttcaaaatcccagtgaacccacttctctcctggtccca
aacttggtgcagaacgaggactttattggccaaaaggctaaaggcctagagccccaagac
gcagaggtgaaggaccagagatccatgatcctgcggtctaggaccaagacacaggaggtc
tacacgaaaaggagaagggagaagaggactgcagatgtcaggctcaaaaactgtaaaaca
cccaagaagctcctttcaaacaaccatctaccccccaccttcaagatcacacccccaggg
gggccacacaaagaagggaaggtgggcaaaagaatgaaactctccaaatccgggcctgga
acgggcagcaaactgtctgagcggccgctgcattcgctgaagagaaaatcaaccttcgtg
tcccctatccctaccaaaaagagaaatttagttttaaggagcagcagcagcagcgcaaaa
gaggagaagcccgaagcctcccccaatctctttaaaaggatgccgtcaaccaaaaaggcg
agagctaaactgcccacaaagagctcctgcgaagcagccttgacgccccctccagctaaa
gaaccccccaacgtctgtattaaaatcacctctcgggccgcatttcagggggccatgaag
acaaaagtgctgcccccgaggaaaggcaggggcctgaagctggaggccattgtgcagaag
atcacctcgccgaatttaaagaagtttgcatgcaaaacggccgccgctactgcacacagt
aatcctctgagccctgccggcgcggagaaggagcgggccttaaagaatgcaagtgtaacc
ccagcggtgggagaagcggggccattaaaccagggcatggcacaaaaggctcctgccgct
tcagtagcagagcaattatgcagaaattcgaacaacagacccttaaaaggaaaactaatg
aacagtaagaaactgtcctctgactgtttcaagggtgaggcctattcatctcccgagaca
gcgcagcacaacggcagcagcatggctgcgaagagcatcagcctgctgcccaagaagagg
aaccgaaaagggaaagcagcagccttcagcgtggccaaaaaccccttggataggcgggcg
catctcgcccctgctctgctcctgacggccagagagcgggcaggcgcgggggacgcgctg
gggaacggggaagacggacaacgggacgggaagaagccgaagaccgaggacaaagacttg
gccaagaatgaaccccctgaggggagaagctcccagacccaaacccgggtgcagaagcag
cgagcgaaccactccagctacaatggctactccaagagacaaaggaaacggcacacccgc
agcaaggccaagaacgtggccgccaggtgtaaaagcagggcgaagcggcagcagcaggcc
ccgctgcttaaccccgcggagcccgaaatcaggctcaagtacatctcgtgcaagcggctg
cggacggacagccgagcgccgcccttctccccctacgtgcgggtggagaagcgcaacgag
ttcaccaccacctgcaccgtcatcaactcagccggggaggaggccaggctccacaaggag
cagcagccttcgtcctcggcccaggccctgcttcccggcggggcctccctgcagcccaaa
gcggcgctgcctttatcttccacaatgcacctgggcccagtggtgtccaaggccctcaac
gcagcctgtctggtctgctgcctctgccggaacccagccaattacaaagacctgggggat
ctctgtgggccgtattacccggagcactgcctgccgaaaaagaaatcgaggctgaaagac
aagattaaagtggaggggccgagcgaagaggctcccgtgccttcgccggcagagagaacg
ctcaaaacgacagataataattgtacaacgagtacaatcagtgggaagccgccaaggctg
gacagtgctgctgactcagcgaaacagagcgctctccggtcgagttccagggggatgttt
aggaaactacaaagctgttactgctgtgatgagaggacagagggagaggaggcggcagag
aagcccagacggcatgagtgcaacaaagccgagtccccgtctcaggagccggtgggagac
acgcaggagcactgggttcacgaagcctgtgctatatggaccgctggggtttacctggtt
gcagggaagctgtatgggctacaggaggcgataaaggtggctgctgaagtgagatgctct
agttgccaacaagcaggagcaaccattgggtgctgccacaagggatgtgcccaaacctat
cattacgcatgtgccatcgacacaggttgcttattaactgaagagaacttctctctgaaa
tgtcccaaacataagaggcagccgttataa

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