Chelonia mydas (green sea turtle): 102942536
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Entry
102942536 CDS
T02989
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102942536 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmy03000
]
102942536 (ARID1A)
03021 Transcription machinery [BR:
cmy03021
]
102942536 (ARID1A)
03036 Chromosome and associated proteins [BR:
cmy03036
]
102942536 (ARID1A)
Transcription factors [BR:
cmy03000
]
Eukaryotic type
Helix-turn-helix
ARID
102942536 (ARID1A)
Transcription machinery [BR:
cmy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102942536 (ARID1A)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102942536 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
102942536
NCBI-ProteinID:
XP_037737951
LinkDB
All DBs
Position
19:10006697..10084600
Genome browser
AA seq
2263 aa
AA seq
DB search
MAAQVAPAAASSLGAPAPAELKKAEAQQRDCPPEEAGGEAVAERGGEKQAESEGPPGKEL
QDGAESNGGDAGAEPDLKSSNGNAGPRPAAATLNNNLPEPPGGGGSSDGVGAPQPPPPPQ
QPPPSHPAALAPPAYGFGPPYGRGAQAAAVAAAAAAAFHQHGGQQSTGMAALQSGGLEQP
YPGPAGAPPGPPPPQNSHGGAEHGFPNHQYNSYYTAAAAGRSAGAYPPPPQAYALSSPRG
SAQSPAQAAAGAKSPAAFQQQQQQRFGAMGPSAAGGAAGGGGATPQPTATPTLNQLLTSP
SSARGYQGYPGGDYSSGPQDGGAAAKGPAADMASQYGGGNSQAWATAAGGGQQRSHHAPM
SPGSSSAGGGQPLARTQQPSSPMDQMGKMRPQPYGGSNPYTQQQAPQSGPQQGHGYPGQP
YGPQTPQRYPMGMQGRTQSAMGSISYAQQIPPYGQQGPSAYGQQSQTPYYNQQSPHPQQQ
QPPYSQQPPSQTSHSQPSYQQPQTPSQPPQPPYPQPQSQPPHQQSPSPYPQQQPTAQQHQ
QSQPPYSQAQSPYQQQQPPQQTAASALSQQSSSYPQSQPQPQQQPAYSQQRFPPPQELSQ
DSFGSQASSAPSMASSKGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGI
SSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPP
RPPSGHSDSIMHPSMNQSSIVQDRGYMQRNPQMPQYSSPQPGSALSPRQSSGGQMHAGMG
PYQQNSLGSYGPQGGQYGPQGGYPRQPNYNAMPNANYPSPGMGGSINPMGAGSQIHGQTG
VQPYTGLPPGRMSHAAIGNRPYGPNMANMPPQVGTGMCPPPGGMNRKAQEAAAAAMHAAA
NSIQNRPPGYPNMNQGGMMGTGAPYGQGINSMAGMINPQGAPYPMSGNMANNSAGMAASP
EMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKIWVD
RYLAFTEEKAMGMTNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTS
SSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQGPQ
TPQSTSSSMAEGGDLKPPTPASTPHSQMPPLPGIRSNSVGLQDAFADGSDPTFQKRNSMT
PNPGYQPSMNTSDMMGRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNTGMGDPYNRAAGP
GMGNMALGQRQHYPYGGPYDRVRTEPGMGPEGSLGTGTPQANIMPSTPDSGMYSPSRYPQ
QQQQQQRHDSYGNQFSTQGTSSGSPFPSQQTTIYQQQQQNYKRPMDGSYGPPAKRHEGEM
YNVSYSTGQGQAQQQLPTAQTQQPSQQQTAQPYTCPAVENQYGSTYPATDRRPAGGPQNQ
FPFQFGRDRVSAPPGSTAQQNMPPQMMGGPIQSTPEGLQQGSLWQGRNEIGYSYPNRQGS
GSAAQGPAYHGVNRTDEILHADQRVNHEGPWPSHGNRQPPYGPSAPVPPMTRPPQPNYQT
PPSMQNHIPQVSSPAPLPRPLENRTSPSKSPFLHSGMKMQKAGPPVPASHIASAAVQPPM
ARRDITFPPGSVEATQPVLKQRRRLTTKDIGTPEAWRVMMSLKSGLLAESTWALDTINIL
LYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQKTLLDPERFCKSS
SPPPEEGDEEEEPQSPNYEEEEEEEEAAFASKEKAPLESNEEKLVSKFDKLPVKIVQKND
PFVVDYSDKLGRVQEFESGLLHWRIGGGDTTEHIQTHFESKMELLLTHKRVSCNSALRKR
SAAESNPGTREGENLPSDGPPEKRITATMDDMLSARPGSLAEEEVKNLEATKESSKFPFG
SSPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNIIRSLSFVPGNDFEMS
KHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLV
TLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFPTLGPNAVLSPQRLVLETL
SKLSIQDNNVDLILATPPFSRLEKVYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAA
RAIAVQKGSIGNLLGFLEDSLATTQFQQSQASLMHMQNPPFESTSVDMMRRAARALLALA
KVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6792 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcaggtcgcccccgccgccgccagcagcctgggcgccccggctccagccgag
ctgaagaaagcggaggcgcagcagcgggattgtcccccggaggaggcggggggcgaggcg
gtggcggagcgcggcggcgagaagcaggcggagagcgagggccccccggggaaggagctg
caggacggggccgagagcaacggaggggacgccggggccgagcccgacctgaagagctcg
aacgggaacgcgggccccaggcccgccgccgccaccctgaacaataacctcccggagccg
cccggcggcggcggcagcagcgacggggtgggggcgccgcagccgccgccgccgccgcag
cagcctcccccttcccacccggccgccttggccccgccagcctacggcttcgggccgccc
tacggccggggagcccaggctgctgccgtcgctgccgccgccgcggctgccttccaccaa
catggcggacaacaaagcactggcatggcagcgctgcagagcgggggcctggagcagccc
tacccggggccggcgggggcccccccggggccgccccctccccagaactcgcatggcggc
gccgagcacggcttccccaaccaccagtacaactcttactacacggcggcggcggccggg
cgcagcgccggcgcctacccgcctcccccccaggcctacgccctgagctccccccggggc
agcgcgcagagccccgcgcaagcggccgccggggccaaatcccccgccgccttccagcag
cagcagcagcagcgcttcggggccatggggccctcggccgccggcggggcagcaggagga
gggggcgccaccccgcagcccaccgcgacccccaccctcaaccagctgcttacctccccc
agctcagcccgcggctaccagggctaccccgggggcgactacagcagcgggccccaggac
gggggagccgccgccaagggcccggccgcggacatggcctcccagtacggcgggggcaat
agccaggcctgggccacggccgcaggagggggccaacaaaggagccaccatgcgcccatg
agccccgggagcagcagcgctggagggggacagccgctcgctaggacccagcagccatca
agcccaatggatcagatggggaagatgagacctcagccatatggaggaagtaacccgtac
acacagcagcaggcacctcagtcggggccacagcaaggacatggctatccaggacagcca
tatgggccacagactccccagagatatcccatgggaatgcaaggcaggacacagagtgca
atgggcagcatctcgtatgcacagcagattcctccttatggacagcagggcccaagtgcg
tatggacagcagagccagactccatattacaaccagcaaagtcctcatccccagcaacag
cagcctccatactctcagcagccaccgtcccagacctctcactcccagccttcttatcaa
cagccgcagactccgtctcagccgccgcagcctccgtacccccagccgcagtcccagccg
ccgcatcagcagtccccgtccccgtatccccagcagcagcccacggcccagcaacatcag
cagagtcagcctccatactcccaggcacagtcgccctaccagcagcagcaaccacctcag
caaaccgccgcctctgctctttcccagcagtcgtcttcataccctcagtcacaacctcag
ccgcagcagcagcctgcgtactcccagcaacgcttcccacctccacaggagttatctcaa
gactcatttgggtcccaggcatcatctgccccctcaatggcttccagtaaaggacaagaa
gatatgaacttgaatcttcaatcaaggccctccagcctgccggatctgtctggttccata
gatgatctacccatgggtacagaaggagccctgagtcctggagtaagcacgtcagggatt
tcaagcagtcaaggagagcagagtaacccagctcagtctcctttctctccgcatacctcg
cctcacctcccaggaatcagagggccctccccttcccccgttggctctcctgctagtgtt
gcccagtcgcgttctggtccactctcacctgctgccgtaccaggcaatcagatgccaccc
cgaccacctagtggccattcggacagtatcatgcatccttccatgaatcagtcaagcata
gtccaagatcgaggttacatgcagaggaatcctcagatgccccagtacagctcccctcag
cctggctccgccttatctccccgtcagtcttctggaggacagatgcatgctgggatggga
ccttatcagcagaattcactgggaagctatgggccccaggggggtcagtatggtcctcaa
ggaggttatcccaggcagccaaactataatgctatgcctaatgccaactaccccagccca
ggaatggggggaagtataaacccaatgggagcagggagccagattcatggtcagactggt
gtacaaccctatactgggcttcccccaggaaggatgagccatgcagccatagggaacagg
ccctatggacccaacatggcaaatatgcctccccaggtggggacagggatgtgcccacca
ccgggtggcatgaaccggaaagcacaagaagcagctgctgccgccatgcatgctgctgcc
aactccatccagaacaggcctcctggctatcccaacatgaaccaaggggggatgatggga
actggagctccttatggacaaggaattaacagtatggctggcatgataaacccccagggt
gctccatatcctatgagtgggaatatggccaacaactcggcagggatggcagcaagtcct
gagatgatgggccttggggatgtcaaactaacgcctgcaactaaaatgaacaataaggca
gatgggacgccaaaaacagaatccaagtcaaagaagtccagttcctctactaccaccaat
gagaagattaccaaattgtatgagctgggtggtgagccggagaggaagatttgggtagat
cgttacctagccttcactgaagagaaggcaatgggcatgaccaacctcccagctgtgggc
aggaaacccctagacctttaccggctctacatctctgtaaaggagattggaggacttact
caggtcaacaaaaacaagaaatggcgtgagttagccaccaatcttaatgtgggcacttct
agcagtgcagctagttctttgaagaagcagtacatccaatgtctctatgcctttgagtgc
aagattgaacgaggcgaagacccgcccccagacatctttgcagctgctgattcaaagaag
tcccagcccaagatacagcccccatctccagcgggttcaggctccatgcagggtcctcag
acacctcaatccaccagcagctctatggcagagggaggagatttgaaaccaccaacgcca
gcgtctacaccacacagtcagatgccccctttgccaggcatcaggagtaactcagtaggt
cttcaggatgcctttgcagatggcagtgaccccacgttccagaagcggaactccatgact
ccaaatcccgggtaccagcccagcatgaatacctccgacatgatgggtcgcatgtcctac
gagccaaataaggatccttatagcagtatgaggaaagctccaggaagtgacccctttatg
tcctcagggcagggccccaacactggtatgggtgacccgtataatcgtgctgcaggtcca
gggatgggtaacatggccctgggacaacggcaacattatccctatggaggtccttacgac
agagtgaggacggaaccaggaatgggacccgagggaagcttaggaactggaactccccag
gccaacattatgccttccacccctgactcagggatgtactctcccagccgctatccacag
cagcaacagcagcagcaacgacatgattcctatggcaatcagttctccactcaaggcaca
tcctctggcagcccctttcccagtcagcaaaccaccatatatcaacagcaacagcagaat
tacaagcgaccgatggatggcagttatggcccacctgccaagcgacacgaaggggagatg
tacaacgtatcgtacagcaccgggcaggggcaggcgcagcagcagttgcctacagcacag
acccaacaaccgagccagcagcaaactgcacagccttatacatgtcctgctgtggagaac
cagtatgggagtacataccctgccactgaccgccgacctgctggagggccgcagaaccag
ttcccgttccaatttggcagagacagggtctcggctcccccgggctcgactgcccagcag
aatatgccaccacagatgatgggtggtcccatacagtctactccagagggcttgcagcag
ggcagcttgtggcaagggcgcaatgaaattggctacagctatccaaatcggcagggttca
ggctctgcagcccaggggcctgcttatcatggagtgaatcgaacagatgaaattctacat
gcagatcagagggtaaatcatgaggggccatggccctcccatgggaaccgtcagcctcct
tatggtccttctgccccggtacccccaatgacaaggcccccacagcctaactaccagacc
cctcctagcatgcagaatcacattcctcaggtatccagcccagcacctctgcccagacct
ctggagaaccgcacctcacccagcaaatctccgttcctgcactcggggatgaaaatgcag
aaagcaggacctcccgtccctgcctcgcatatagcctcagcggccgtacagcctcccatg
gcacgacgggacatcaccttcccacccggatccgtggaagctacgcagcccgtgttgaag
caaaggagacggctgaccacgaaagatattggaactcctgaagcatggagagtgatgatg
tctctgaagtctgggttgctggctgaaagtacgtgggccttggataccataaacatcctg
ctctatgatgacaacagcataatgaccttcaacctcagccagctgccagggttgctggag
ctactggtggaatatttccggcgttgcctgatcgaaatctttgggatcctaaaggaatat
gaggtgggagatccaggacaaaaaacactattagatcctgaaagattctgcaagtcttca
agtccccctcctgaagagggggacgaagaggaggagccacagagccctaactatgaggaa
gaggaggaggaagaggaggctgcatttgcaagtaaagagaaagcacccctagagagcaat
gaggaaaaactagtcagtaaatttgacaagctgccagtcaagatagtgcagaagaacgac
ccatttgtggtagattactcagacaagctggggcgagtacaggagtttgaaagtggactg
ctgcactggcggattggtggtggagacaccactgaacacattcaaacccactttgagagc
aaaatggagctactgttaactcacaaacgagtttcctgcaactctgccttgagaaaacgt
tccgcagctgagagcaatccaggaactagagagggggagaatctgccatctgatggtccc
ccggagaaaaggataacggctactatggatgacatgctttcggcacggccaggttcgctg
gcggaggaggaggtcaaaaacttggaagcaacaaaggaaagcagcaaatttccatttggc
agtagtccagctcagagccacagaaatatcaaaattctggaggacgaacctcacagtaaa
gatgagacacccctgtgcacccttctagactggcaagactctctagctaaacgctgcgtc
tgtgtgtctaacatcatcaggagtttatcgtttgtgccgggcaatgactttgaaatgtct
aagcaccccggtctgctgctgattctagggaaactgattctcctgcaccacaagcatccg
gaacgcaaacaggcaccactgacctatgagaaggaagaggagcaggaccaaggggtgagc
tgcaacaaggtggagtggtggtgggactgcttggagatgctgcgtgaaaacacgctggtt
acactggccaacatttctggtcagttggacctctccccgtacccggaaagcatctgtttg
cctgtcctggatggactcctccactgggcagtatgtccatcagcagaggcccaggatcct
tttccaaccctggggcctaatgctgtcctctcccctcagagactggttttggaaactctc
agcaaactcagcatccaggacaacaacgtggatttgattcttgcaactcccccctttagt
cgcttggagaaggtctatagcaccatggtgcgtttccttagtgacagaaagaacccagtg
tgtcgagagatggctgtggtactactggccaacttggcacagggcgacagcctggcagct
agagcaattgcagtgcagaagggcagcattggcaacttgttgggcttcttggaggacagc
ctggcaaccactcagttccagcagagtcaggccagcttgatgcacatgcaaaaccctccc
tttgagtcgacaagtgtggacatgatgcgtcgggcagctcgggcgctgcttgccctggcc
aaagtggacgagaaccactctgagttcacgttatacgagtcgcggctgttggacatctcc
gtgtcgcctttgatgaactcgttggtttcacaagttatttgtgatgtactgtttttaatt
ggccagtcatga
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integrated database retrieval system
