Chelonia mydas (green sea turtle): 102942537
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Entry
102942537 CDS
T02989
Symbol
COLGALT1
Name
(RefSeq) procollagen galactosyltransferase 1 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy00310
Lysine degradation
cmy00514
Other types of O-glycan biosynthesis
cmy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102942537 (COLGALT1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
102942537 (COLGALT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cmy01003
]
102942537 (COLGALT1)
Enzymes [BR:
cmy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
102942537 (COLGALT1)
Glycosyltransferases [BR:
cmy01003
]
O-Glycan biosynthesis
O-linked Gal type
102942537 (COLGALT1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
102942537
NCBI-ProteinID:
XP_037743998
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Position
20:18863335..18884768
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AA seq
606 aa
AA seq
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MAPAAGLWLLLLLLLAPGGAYFPEERWSPESPLQAPRVLIALLARNAAHALPAVLGALER
LRHPKERTALWVATDHNTDNTTAVLREWLINVQTLYHYVEWRPMEEPRSYPDEEGLKHWS
NSRYEHVMKLRQAALKSARDMWADYILFVDADNLLTNPDTLGLLMAENKTVVAPMLDSRA
AYSNFWCGMTSQGYYKRTPAYIPIRKRDRRGCFAVPMVHSTFLIDLRKEASQDLAFYPPH
PDYTWSFDDIIVFAFACKQAEVQMFVCNKEVYGFLPVPLRAHSTMRDEVESFMHVQLEIM
VKNPPVEPSQYLSVLPKVPDKMSFDEVFMINLKRRADRRERMLQTLYEQQIDCKIIEAVD
GKAMNSSEVEAMGIQMLPGYKDPYHGRPLTKGELGCFLSHYKIWKEIVERGLEKSVVFED
DLRFEIFFKRRLMNLMYDLEEEGLDWDLIYIGRKRMQVEHPEKSVPHVRNLVEADYSYWT
LAYVISLQGAQKLLGAEPLSKMLPVDEFLPVMFDKHPVSEYMEHFENRNLLAFSVEPLLV
YPTHYTGDDGYISDTETSVVWNNERVKTDWDRAKSQKMKEQQELSKEAKNSDVLQSPLDS
TARDEL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggccccggccgccgggctctggctgctgctgctgctgctgctggccccgggcggcgcc
tacttccccgaggagcggtggagcccggagtcgccgctccaggcgccccgggtgctgatc
gcgctgctcgcccggaacgcggcgcacgcgctgccggcggtgctgggggccctggagcgg
ctgcggcacccgaaggagcgaacggcgctgtgggtggcaacagaccacaacactgacaac
acaacggctgtgctacgagaatggctgataaatgtgcagaccttgtatcactatgtggag
tggaggccgatggaggagcccaggtcctatccggatgaggaaggcctgaagcactggtca
aattctcgctatgagcacgtgatgaagctcagacaagcagccttgaaatctgccagggac
atgtgggctgactacatcttgtttgtggatgcagataatctcctgacaaacccagacacc
ctgggcctgctgatggcagagaacaagaccgtagtggcacccatgttggactctcgtgct
gcctattctaacttctggtgtggaatgacctcgcagggttattacaaacgcactcctgcc
tacattcccattcgaaaacgagatcgccgtggctgctttgctgtccccatggtgcactcc
actttcctgattgacctgcggaaagaggcctcccaggaccttgccttctacccaccacac
ccagattacacctggtcttttgatgacatcattgtgtttgcatttgcctgcaagcaggca
gaggtccagatgtttgtatgcaacaaagaggtttatggcttcctgccagtgccactgaga
gcccacagcaccatgcgggatgaggtggaaagcttcatgcatgtgcagctggagattatg
gtgaagaaccctccggtggaaccttcacagtacctgtccgtcctgcccaaggtccctgac
aagatgagctttgatgaggttttcatgattaacttaaagcgcagggcagatcgacgagag
cgaatgctgcagacgctgtacgagcagcagatcgactgcaaaatcattgaggctgtggat
ggaaaagccatgaacagcagtgaggtggaagccatggggattcagatgctgccaggatat
aaggatccataccacggccgtccactcaccaagggggagctgggctgcttcctcagtcac
tacaagatctggaaggagattgtggagagagggctggagaaatcagtcgtattcgaggat
gacctgcggtttgaaatattctttaaacgacggctaatgaatctgatgtatgacctcgaa
gaagagggtctggactgggacttgatttacattgggaggaagcgaatgcaggtggagcat
ccagagaagtctgtgcctcacgtgcggaacctggtggaggcagattattcctactggact
ctagcctatgtgatttcactgcagggtgcccagaagctgctgggggctgagccactctcc
aagatgttaccggtggatgaatttcttcctgtcatgtttgacaaacaccctgtctctgaa
tacatggaacattttgaaaaccggaatttgctggccttttcagtggaaccactgctggtt
tacccaacacattacactggtgatgatggctacatcagcgacactgagacctctgtggtt
tggaataatgagagagtaaaaactgactgggaccgtgccaaatcccagaaaatgaaagaa
cagcaggagctcagcaaggaggccaagaactcagatgtgctccaatcacctcttgacagt
acagcccgggatgagctatga
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