Chelonia mydas (green sea turtle): 102942891
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Entry
102942891 CDS
T02989
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102942891 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102942891 (DHX36)
03012 Translation factors [BR:
cmy03012
]
102942891 (DHX36)
Enzymes [BR:
cmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102942891 (DHX36)
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102942891 (DHX36)
Translation factors [BR:
cmy03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
102942891 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
ATPase
nSTAND3
NPHP3_N
NACHT
PhoH
ABC_tran
Motif
Other DBs
NCBI-GeneID:
102942891
NCBI-ProteinID:
XP_007057426
LinkDB
All DBs
Position
9:25228449..25268838
Genome browser
AA seq
976 aa
AA seq
DB search
MSFEHRRDWSRGGGGGPRPSSSSAGGPEGRGGRGRHPSHLKGRDIGLWYARKQGQKSKEP
DRQQRAVVRMDERREEQIVQLLNTVQTRNEKEQESVSWWSGEEEGPEVPLEKPTLAKTSV
KQRPILEKTFLDRDSEYLFQENEPDIDLNEKFREELRKKKFDPRYIEMQRFREKLPSYGI
RRELITMINNNQVTVISGETGCGKTTQVTQFILDDCIERGKGSACRIVCTQPRRISAISV
AERVAAERAEVCGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKQLSSVSHVI
LDEIHERNLQSDVLMTVIKDLLNVRPDLKVILMSATLNAEKFSEYFDNCPMIHIPGFTFP
VVEYLLEDTIEKLRYTPKDTDCRPRLKKGFMQGHISRPEKEEKEEIYRERWPDYLRQLRG
RYSASTIDALEMMDDDKIDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQV
MFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKI
KETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEIL
RTPLEELCLQIKILRLGGIAYFLSRLMDPPSREAVMLSINHLMELNALDRQEELTPLGVH
LARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELSKNT
KSDHLTVVNAFAGWEEVRRRGFRSEKDYCWEYFLSSNTLQMLLNMKGQFAEHLLAAGFVS
SKNPRDPKSNTNSDNEKLLKAVICAGLYPKVAKIRKSFSKKRKMVKVCTKTDGTVNIHPK
SVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQDTIAVDE
WIVFESPARIGNLVKDLRRELDDLLQEKIENPHPVDWNDTKSRDTAVLTAIIDLITTQEN
ESPRNYAPRFQNERYS
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgagcaccgcagggactggagccgcggaggaggagggggcccccggccttcc
tcctcctccgcggggggacccgaaggccgcgggggccggggccggcatcccagtcacctc
aagggccgcgacatcgggctgtggtacgcgcggaagcagggccagaaaagcaaagagccc
gacaggcagcagagagctgtggtgcgtatggatgaacgcagggaagaacagattgttcag
ttgctgaatactgtccagactagaaatgaaaaagaacaagaatctgtgtcatggtggtcc
ggtgaggaagaaggtccagaggtacctctagagaaaccaaccttggcgaagacttctgta
aagcagagaccaattttggagaaaacattcctagatcgagattcagaatatctctttcaa
gaaaatgagccagatattgatttgaatgagaaatttagagaagagttaagaaagaagaaa
tttgatcctagatacattgaaatgcagagattccgagagaaacttccttcatatgggata
agaagggaactgataactatgatcaataataatcaggtgactgtgataagtggtgagact
ggttgtggaaagacgacacaagttactcagttcattctggatgactgtatagagagaggg
aaaggatctgcttgcaggattgtgtgtacccaacctaggaggatcagtgctatctcagtg
gcagagagagttgcagctgaaagggcagaagtgtgtggtaatggcaagagtacaggatac
caaattcgtctccagagtcggttaccaaggaaacaaggttccattttgtactgtacaaca
ggaatcgtccttcagtggctccaatcagacaagcagttgtccagtgttagtcatgttatt
cttgatgaaatccatgaaagaaatcttcaatcagatgtcttaatgacggttattaaagat
cttctaaatgttcgaccagacctgaaagtaatactgatgagtgctactttgaatgctgag
aaattttcagaatatttcgacaattgtcccatgatccatatacctggattcaccttccct
gttgtggaatatcttttggaagacacaattgaaaagttaagatatactccaaaagataca
gattgcagaccacggttgaagaagggctttatgcaaggacacataagcagaccagaaaag
gaagagaaagaagaaatctatagagaacgatggccagattatctaaggcagctgcgagga
aggtattcagcaagtactatagatgcattggaaatgatggatgatgacaagattgatctt
gaccttatagctgcacttatcagacacattgtcctagaggaagaggatggtgcaatactg
gtgtttctcccaggctgggacaatattagcactttacatgacctcttgatgtcacaagtc
atgtttaagtcagatagattcattattattcctctgcattcactgatgcctactgttaat
cagacacaggtttttaaaaagacccctcctggagtacggaaaattgtaattgctaccaac
attgcagagactagcattaccattgatgatgtggtgtatgtcatagatggaggaaaaata
aaagaaactcactttgatacacagaacaacattagcacaatggcagcagagtgggtcagt
aaagctaatgccaaacaaaggaaaggtcgagcaggaagagtccagccgggtcactgttat
catctatacaatggtctacgtgccagcctactggatgattatcaattaccggaaatccta
aggacacctttggaagaactttgtttacaaatcaagattctaaggcttggtggaattgct
tattttctgagtaggctaatggatccaccatctcgtgaagctgtgatgttgtccataaat
catctaatggaactgaatgctttggatagacaagaagaactgactccattaggtgtccac
ttggcacgattgccagttgagccacatattggaaaaatgatcctctttggagctttattc
tgttgcttagatccagtactcacaattgcagccagcctcagcttcaaggacccctttgtg
attccactgggcaaagagaaagtagcagatgcaagaagaaaagaattatcaaagaatact
aaaagtgaccatctaactgttgtgaatgcttttgcgggctgggaagaggtccggcgacgt
ggtttcagaagtgaaaaggattattgctgggaatattttctctcttcaaatacacttcag
atgctgcttaacatgaaaggacagtttgctgaacatctccttgcggctgggtttgtgagt
agtaaaaacccccgagatcccaaatctaataccaactcagataatgagaagttactcaaa
gcagtcatctgtgctggtttatatccaaaagttgcaaagatccgtaaaagctttagcaaa
aagagaaaaatggtgaaagtttgcaccaagacagatggaacagttaacattcatcctaaa
tctgttaacgtggaagagacagaattccattataactggcttgtgtatcacttaaagatg
agaactagcagtatttacctgtatgattgtacagaggtctctccatactgtcttttgttc
ttcggcggagatatttccatccagaaggataaagatcaggatactattgcagtggatgaa
tggattgtctttgagtctccagctaggataggaaatctagttaaggatttaagaagagaa
ctggatgaccttctacaagaaaaaattgaaaacccacaccctgtggactggaatgacact
aaatccagggacactgcagtgctgacagccattatagacctaatcacaacacaggagaat
gaaagtcccagaaactatgcccctcgatttcagaatgaacgttacagttga
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